Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	A	E	L	T	A	L	H	T	L	T	A	Q	M	K	R	E	G	I	R	R	L	L	V	L	S	G	E	E	G	W	C	F	E	H	T	L	K	L	R	D	A	L	P	G	D	W	L	W	I	S	P	R	P	D	A	E	N	H	C
Secondary structure
SS confidence
Disorder		?	?	?																																																				?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		S	P	S	A	L	Q	T	L	L	G	R	E	F	R	H	A	V	F	D	A	R	H	G	F	D	A	A	A	F	A	A	L	S	G	T	L	K	A	G	S	W	L	V	L	L	L	P	V	W	E	E	W	E	N	Q	P	D	A	D	S
Secondary structure
SS confidence
Disorder																																																						?	?	?			?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		L	R	W	S	D	C	P	D	P	I	A	T	P	H	F	V	Q	H	L	K	R	V	L	T	A	D	N	E	A	I	L	W	R	Q	N	Q	P	F	S	L	A	H	F	T	P	R	T	D	W	Y	P	A	T	G	A	P	Q	P	E	Q
Secondary structure
SS confidence
Disorder							?																														?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		Q	Q	L	L	K	Q	L	M	T	M	P	P	G	V	A	A	V	T	A	A	R	G	R	G	K	S	A	L	A	G	Q	L	I	S	R	I	A	G	R	A	I	V	T	A	P	A	K	A	S	T	D	V	L	A	Q	F	A	G	E	K
Secondary structure
SS confidence
Disorder											?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Sequence		F	R	F	I	A	P	D	A	L	L	A	S	D	E	Q	A	D	W	L	V	V	D	E	A	A	A	I	P	A	P	L	L	H	Q	L	V	S	R	F	P	R	T	L	L	T	T	T	V	Q	G	Y	E	G	T	G	R	G	F	L	L
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Sequence		K	F	C	A	R	F	P	H	L	H	R	F	E	L	Q	Q	P	I	R	W	A	Q	G	C	P	L	E	K	M	V	S	E	A	L	V	F	D	D	E	N	F	T	H	T	P	Q	G	N	I	V	I	S	A	F	E	Q	T	L	W	Q
Secondary structure
SS confidence
Disorder																																										?	?																		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence		S	D	P	E	T	P	L	K	V	Y	Q	L	L	S	G	A	H	Y	R	T	S	P	L	D	L	R	R	M	M	D	A	P	G	Q	H	F	L	Q	A	A	G	E	N	E	I	A	G	A	L	W	L	V	D	E	G	G	L	S	Q	Q
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Sequence		L	S	Q	A	V	W	A	G	F	R	R	P	R	G	N	L	V	A	Q	S	L	A	A	H	G	N	N	P	L	A	A	T	L	R	G	R	R	V	S	R	I	A	V	H	P	A	R	Q	R	E	G	T	G	R	Q	L	I	A	G	A
Secondary structure
SS confidence
Disorder								?	?	?	?	?	?																																					?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Sequence		L	Q	Y	T	Q	D	L	D	Y	L	S	V	S	F	G	Y	T	G	E	L	W	R	F	W	Q	R	C	G	F	V	L	V	R	M	G	N	H	R	E	A	S	S	G	C	Y	T	A	M	A	L	L	P	M	S	D	A	G	K	Q	L
Secondary structure
SS confidence
Disorder																																					?			?
Disorder confidence
		.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
Sequence		A	E	R	E	H	Y	R	L	R	R	D	A	Q	A	L	A	Q	W	N	G	E	T	L	P	V	D	P	L	N	D	A	V	L	S	D	D	D	W	L	E	L	A	G	F	A	F	A	H	R	P	L	L	T	S	L	G	C	L	L	R
Secondary structure
SS confidence
Disorder																			?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?											?
Disorder confidence
		.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
Sequence		L	L	Q	T	S	E	L	A	L	P	A	L	R	G	R	L	Q	K	N	A	S	D	A	Q	L	C	T	T	L	K	L	S	G	R	K	M	L	L	V	R	Q	R	E	E	A	A	Q	A	L	F	A	L	N	D	V	R	T	E	R	L
Secondary structure
SS confidence
Disorder					?	?		?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	670	.
Sequence		R	D	R	I	T	Q	W	Q	L	F	H
Secondary structure
SS confidence
Disorder									?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 2zpa chain B Region: 1 - 670 Aligned: 662 Modelled: 669 Confidence: 100.0% Identity: 98% PDB header:transferase Chain: B: PDB Molecule:uncharacterized protein ypfi; PDBTitle: crystal structure of trna(met) cytidine acetyltransferase Phyre2 PDB 1n71 chain A Region: 349 - 535 Aligned: 149 Modelled: 151 Confidence: 99.0% Identity: 15% Fold: Acyl-CoA N-acyltransferases (Nat) Superfamily: Acyl-CoA N-acyltransferases (Nat) Family: N-acetyl transferase, NAT Phyre2 PDB 2jdc chain A domain 1 Region: 390 - 534 Aligned: 112 Modelled: 114 Confidence: 99.0% Identity: 10% Fold: Acyl-CoA N-acyltransferases (Nat) Superfamily: Acyl-CoA N-acyltransferases (Nat) Family: N-acetyl transferase, NAT Phyre2 PDB 3ey5 chain A Region: 361 - 551 Aligned: 153 Modelled: 153 Confidence: 98.9% Identity: 16% PDB header:transferase Chain: A: PDB Molecule:acetyltransferase-like, gnat family; PDBTitle: putative acetyltransferase from gnat family from bacteroides2 thetaiotaomicron. Phyre2 PDB 1yvk chain A domain 1 Region: 367 - 514 Aligned: 107 Modelled: 109 Confidence: 98.9% Identity: 24% Fold: Acyl-CoA N-acyltransferases (Nat) Superfamily: Acyl-CoA N-acyltransferases (Nat) Family: N-acetyl transferase, NAT Phyre2 PDB 3lod chain A Region: 368 - 533 Aligned: 127 Modelled: 129 Confidence: 98.9% Identity: 13% PDB header:transferase Chain: A: PDB Molecule:putative acyl-coa n-acyltransferase; PDBTitle: the crystal structure of the putative acyl-coa n-acyltransferase from2 klebsiella pneumoniae subsp.pneumoniae mgh 78578 Phyre2 PDB 1qsr chain A Region: 349 - 536 Aligned: 147 Modelled: 152 Confidence: 98.9% Identity: 13% Fold: Acyl-CoA N-acyltransferases (Nat) Superfamily: Acyl-CoA N-acyltransferases (Nat) Family: N-acetyl transferase, NAT Phyre2 PDB 2atr chain A domain 1 Region: 366 - 512 Aligned: 107 Modelled: 110 Confidence: 98.9% Identity: 24% Fold: Acyl-CoA N-acyltransferases (Nat) Superfamily: Acyl-CoA N-acyltransferases (Nat) Family: N-acetyl transferase, NAT Phyre2 PDB 2ree chain B Region: 361 - 533 Aligned: 156 Modelled: 156 Confidence: 98.8% Identity: 15% PDB header:transferase, lyase Chain: B: PDB Molecule:cura; PDBTitle: crystal structure of the loading gnatl domain of cura from lyngbya2 majuscula Phyre2 PDB 2x7b chain A Region: 348 - 532 Aligned: 152 Modelled: 159 Confidence: 98.8% Identity: 17% PDB header:transferase Chain: A: PDB Molecule:n-acetyltransferase sso0209; PDBTitle: crystal structure of the n-terminal acetylase ard1 from2 sulfolobus solfataricus p2 Phyre2 PDB 1tiq chain A Region: 381 - 533 Aligned: 123 Modelled: 118 Confidence: 98.8% Identity: 14% Fold: Acyl-CoA N-acyltransferases (Nat) Superfamily: Acyl-CoA N-acyltransferases (Nat) Family: N-acetyl transferase, NAT Phyre2 PDB 1y9w chain A domain 1 Region: 390 - 533 Aligned: 103 Modelled: 106 Confidence: 98.8% Identity: 12% Fold: Acyl-CoA N-acyltransferases (Nat) Superfamily: Acyl-CoA N-acyltransferases (Nat) Family: N-acetyl transferase, NAT Phyre2 PDB 2r98 chain A Region: 349 - 534 Aligned: 141 Modelled: 150 Confidence: 98.8% Identity: 19% PDB header:transferase Chain: A: PDB Molecule:putative acetylglutamate synthase; PDBTitle: crystal structure of n-acetylglutamate synthase (selenomet2 substituted) from neisseria gonorrhoeae Phyre2 PDB 1ghe chain A Region: 392 - 533 Aligned: 109 Modelled: 109 Confidence: 98.8% Identity: 20% Fold: Acyl-CoA N-acyltransferases (Nat) Superfamily: Acyl-CoA N-acyltransferases (Nat) Family: N-acetyl transferase, NAT Phyre2 PDB 1y9k chain A domain 1 Region: 382 - 534 Aligned: 116 Modelled: 116 Confidence: 98.8% Identity: 18% Fold: Acyl-CoA N-acyltransferases (Nat) Superfamily: Acyl-CoA N-acyltransferases (Nat) Family: N-acetyl transferase, NAT Phyre2 PDB 2k5t chain A Region: 388 - 512 Aligned: 87 Modelled: 87 Confidence: 98.7% Identity: 21% PDB header:transferase Chain: A: PDB Molecule:uncharacterized protein yhhk; PDBTitle: solution nmr structure of putative n-acetyl transferase2 yhhk from e. coli bound to coenzyme a: northeast3 structural genomics consortium target et106 Phyre2 PDB 2g3a chain A domain 1 Region: 390 - 531 Aligned: 101 Modelled: 104 Confidence: 98.7% Identity: 22% Fold: Acyl-CoA N-acyltransferases (Nat) Superfamily: Acyl-CoA N-acyltransferases (Nat) Family: N-acetyl transferase, NAT Phyre2 PDB 1yx0 chain A domain 1 Region: 362 - 533 Aligned: 132 Modelled: 135 Confidence: 98.7% Identity: 15% Fold: Acyl-CoA N-acyltransferases (Nat) Superfamily: Acyl-CoA N-acyltransferases (Nat) Family: N-acetyl transferase, NAT Phyre2 PDB 2cnt chain D Region: 362 - 536 Aligned: 137 Modelled: 137 Confidence: 98.7% Identity: 16% PDB header:transferase Chain: D: PDB Molecule:modification of 30s ribosomal subunit protein s18; PDBTitle: rimi - ribosomal s18 n-alpha-protein acetyltransferase in2 complex with coenzymea. Phyre2 PDB 2dxq chain A Region: 347 - 517 Aligned: 136 Modelled: 140 Confidence: 98.7% Identity: 18% PDB header:transferase Chain: A: PDB Molecule:acetyltransferase; PDBTitle: putative acetyltransferase from agrobacterium tumefaciens str. c58 Phyre2 1 c2zpaB_ 2 d1n71a_ 3 d2jdca1 4 c3ey5A_ 5 d1yvka1 6 c3lodA_ 7 d1qsra_ 8 d2atra1 9 c2reeB_ 10 c2x7bA_ 11 d1tiqa_ 12 d1y9wa1 13 c2r98A_ 14 d1ghea_ 15 d1y9ka1 16 c2k5tA_ 17 d2g3aa1 18 d1yx0a1 19 c2cntD_ 20 c2dxqA_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499