Email l.a.kelley@imperial.ac.uk Description P76515 Date Thu Jan 5 12:23:55 GMT 2012 Unique Job ID 5220c934620f2442

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3gw6F_ 32.3 45 PDB header:chaperone Chain: F: PDB Molecule:endo-n-acetylneuraminidase; PDBTitle: intramolecular chaperone 2 c3g79A_ 29.9 31 PDB header:oxidoreductase Chain: A: PDB Molecule:ndp-n-acetyl-d-galactosaminuronic acid dehydrogenase; PDBTitle: crystal structure of ndp-n-acetyl-d-galactosaminuronic acid2 dehydrogenase from methanosarcina mazei go1 3 c1zy7A_ 25.2 35 PDB header:hydrolase Chain: A: PDB Molecule:rna-specific adenosine deaminase b1, isoform PDBTitle: crystal structure of the catalytic domain of an adenosine2 deaminase that acts on rna (hadar2) bound to inositol3 hexakisphosphate (ihp) 4 d2plga1 24.2 31 Fold:Secretion chaperone-like Superfamily:Type III secretory system chaperone-like Family:Tll0839-like 5 c3plnA_ 23.2 19 PDB header:oxidoreductase Chain: A: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: crystal structure of klebsiella pneumoniae udp-glucose 6-dehydrogenase2 complexed with udp-glucose 6 c1mv8A_ 20.9 28 PDB header:oxidoreductase Chain: A: PDB Molecule:gdp-mannose 6-dehydrogenase; PDBTitle: 1.55 a crystal structure of a ternary complex of gdp-mannose2 dehydrogenase from psuedomonas aeruginosa 7 d3er7a1 20.1 41 Fold:Cystatin-like Superfamily:NTF2-like Family:Exig0174-like 8 c1dliA_ 19.1 19 PDB header:oxidoreductase Chain: A: PDB Molecule:udp-glucose dehydrogenase; PDBTitle: the first structure of udp-glucose dehydrogenase (udpgdh) reveals the2 catalytic residues necessary for the two-fold oxidation 9 c3prjB_ 17.8 22 PDB header:oxidoreductase Chain: B: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: role of packing defects in the evolution of allostery and induced fit2 in human udp-glucose dehydrogenase. 10 c3ci9B_ 15.2 29 PDB header:transcription Chain: B: PDB Molecule:heat shock factor-binding protein 1; PDBTitle: crystal structure of the human hsbp1 11 c3ojlA_ 15.1 28 PDB header:oxidoreductase Chain: A: PDB Molecule:cap5o; PDBTitle: native structure of the udp-n-acetyl-mannosamine dehydrogenase cap5o2 from staphylococcus aureus 12 c2y0dB_ 15.0 33 PDB header:oxidoreductase Chain: B: PDB Molecule:udp-glucose dehydrogenase; PDBTitle: bcec mutation y10k 13 c3m06F_ 14.0 43 PDB header:protein binding Chain: F: PDB Molecule:tnf receptor-associated factor 2; PDBTitle: crystal structure of traf2 14 d1ttaa_ 13.0 18 Fold:Prealbumin-like Superfamily:Transthyretin (synonym: prealbumin) Family:Transthyretin (synonym: prealbumin) 15 c2keqA_ 13.0 23 PDB header:splicing Chain: A: PDB Molecule:dna polymerase iii alpha subunit, nucleic acid PDBTitle: solution structure of dnae intein from nostoc punctiforme 16 c1aq5C_ 12.5 45 PDB header:coiled-coil Chain: C: PDB Molecule:cartilage matrix protein; PDBTitle: high-resolution solution nmr structure of the trimeric coiled-coil2 domain of chicken cartilage matrix protein, 20 structures 17 c2lkaA_ 11.8 63 PDB header:toxin Chain: A: PDB Molecule:toxin ts16; PDBTitle: new tricks of an old fold: structural versatility of scorpion toxins2 with common cysteine spacing 18 c2oqqB_ 10.8 29 PDB header:transcription Chain: B: PDB Molecule:transcription factor hy5; PDBTitle: crystal structure of hy5 leucine zipper homodimer from2 arabidopsis thaliana 19 d1rwha1 10.4 32 Fold:alpha/alpha toroid Superfamily:Chondroitin AC/alginate lyase Family:Hyaluronate lyase-like catalytic, N-terminal domain 20 c3rylB_ 10.2 44 PDB header:protein binding Chain: B: PDB Molecule:protein vpa1370; PDBTitle: dimerization domain of vibrio parahemolyticus vopl 21 d1f53a_ not modelled 10.1 29 Fold:gamma-Crystallin-like Superfamily:gamma-Crystallin-like Family:Killer toxin-like protein SKLP 22 c3c8xA_ not modelled 10.1 17 PDB header:transferase Chain: A: PDB Molecule:ephrin type-a receptor 2; PDBTitle: crystal structure of the ligand binding domain of human ephrin a22 (epha2) receptor protein kinase 23 c1cosA_ not modelled 10.0 50 PDB header:alpha-helical bundle Chain: A: PDB Molecule:coiled serine; PDBTitle: crystal structure of a synthetic triple-stranded alpha-2 helical bundle 24 c1cosC_ not modelled 10.0 50 PDB header:alpha-helical bundle Chain: C: PDB Molecule:coiled serine; PDBTitle: crystal structure of a synthetic triple-stranded alpha-2 helical bundle 25 c1cosB_ not modelled 10.0 50 PDB header:alpha-helical bundle Chain: B: PDB Molecule:coiled serine; PDBTitle: crystal structure of a synthetic triple-stranded alpha-2 helical bundle 26 c3gg2B_ not modelled 9.9 45 PDB header:oxidoreductase Chain: B: PDB Molecule:sugar dehydrogenase, udp-glucose/gdp-mannose PDBTitle: crystal structure of udp-glucose 6-dehydrogenase from2 porphyromonas gingivalis bound to product udp-glucuronate 27 c3f59A_ not modelled 9.7 45 PDB header:structural protein Chain: A: PDB Molecule:ankyrin-1; PDBTitle: crystal structure of zu5-ank, the spectrin binding region of human2 erythroid ankyrin 28 c2h1xB_ not modelled 9.6 23 PDB header:hydrolase Chain: B: PDB Molecule:5-hydroxyisourate hydrolase (formerly known as PDBTitle: crystal structure of 5-hydroxyisourate hydrolase (formerly2 known as trp, transthyretin related protein) 29 d2it9a1 not modelled 9.2 42 Fold:ssDNA-binding transcriptional regulator domain Superfamily:ssDNA-binding transcriptional regulator domain Family:PMN2A0962/syc2379c-like 30 d2bvca1 not modelled 8.9 11 Fold:beta-Grasp (ubiquitin-like) Superfamily:Glutamine synthetase, N-terminal domain Family:Glutamine synthetase, N-terminal domain 31 c1coiA_ not modelled 8.8 50 PDB header:alpha-helical bundle Chain: A: PDB Molecule:coil-vald; PDBTitle: designed trimeric coiled coil-vald 32 d1mv8a1 not modelled 8.6 55 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:UDP-glucose/GDP-mannose dehydrogenase dimerisation domain 33 d1f52a1 not modelled 8.3 11 Fold:beta-Grasp (ubiquitin-like) Superfamily:Glutamine synthetase, N-terminal domain Family:Glutamine synthetase, N-terminal domain 34 d1dlja1 not modelled 8.2 43 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:UDP-glucose/GDP-mannose dehydrogenase dimerisation domain 35 c2jgoC_ not modelled 7.8 50 PDB header:de novo protein Chain: C: PDB Molecule:coil ser l9c; PDBTitle: stucture of the arsenated de novo designed peptide coil ser2 l9c 36 c3ljmA_ not modelled 7.8 50 PDB header:de novo protein Chain: A: PDB Molecule:coil ser l9c; PDBTitle: structure of de novo designed apo peptide coil ser l9c 37 c2jgoA_ not modelled 7.8 50 PDB header:de novo protein Chain: A: PDB Molecule:coil ser l9c; PDBTitle: stucture of the arsenated de novo designed peptide coil ser2 l9c 38 c3ljmB_ not modelled 7.8 50 PDB header:de novo protein Chain: B: PDB Molecule:coil ser l9c; PDBTitle: structure of de novo designed apo peptide coil ser l9c 39 c3ljmC_ not modelled 7.8 50 PDB header:de novo protein Chain: C: PDB Molecule:coil ser l9c; PDBTitle: structure of de novo designed apo peptide coil ser l9c 40 c2jgoB_ not modelled 7.8 50 PDB header:de novo protein Chain: B: PDB Molecule:coil ser l9c; PDBTitle: stucture of the arsenated de novo designed peptide coil ser2 l9c 41 d1vq3a_ not modelled 7.5 17 Fold:PurS-like Superfamily:PurS-like Family:PurS subunit of FGAM synthetase 42 c3hroA_ not modelled 7.5 35 PDB header:transport protein Chain: A: PDB Molecule:transient receptor potential (trp) channel PDBTitle: crystal structure of a c-terminal coiled coil domain of2 transient receptor potential (trp) channel subfamily p3 member 2 (trpp2, polycystic kidney disease 2) 43 c2pnvA_ not modelled 7.5 20 PDB header:membrane protein Chain: A: PDB Molecule:small conductance calcium-activated potassium PDBTitle: crystal structure of the leucine zipper domain of small-2 conductance ca2+-activated k+ (skca) channel from rattus3 norvegicus 44 c3rj1S_ not modelled 7.4 31 PDB header:transcription Chain: S: PDB Molecule:mediator of rna polymerase ii transcription subunit 18; PDBTitle: architecture of the mediator head module 45 d2nvna1 not modelled 7.2 50 Fold:ssDNA-binding transcriptional regulator domain Superfamily:ssDNA-binding transcriptional regulator domain Family:PMN2A0962/syc2379c-like 46 d1hn0a2 not modelled 7.1 38 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:Chondroitin ABC lyase I, N-terminal domain 47 d1tfpa_ not modelled 7.0 25 Fold:Prealbumin-like Superfamily:Transthyretin (synonym: prealbumin) Family:Transthyretin (synonym: prealbumin) 48 c3ssbJ_ not modelled 6.9 57 PDB header:hydrolase/hydrolase inhibitor Chain: J: PDB Molecule:inducible metalloproteinase inhibitor protein; PDBTitle: structure of insect metalloproteinase inhibitor in complex with2 thermolysin 49 c1q2kA_ not modelled 6.7 46 PDB header:toxin Chain: A: PDB Molecule:neurotoxin bmk37; PDBTitle: solution structure of bmbktx1 a new potassium channel2 blocker from the chinese scorpion buthus martensi karsch 50 d1k8ib2 not modelled 6.5 37 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 51 c3e8yX_ not modelled 6.5 46 PDB header:toxin Chain: X: PDB Molecule:potassium channel toxin alpha-ktx 19.1; PDBTitle: xray structure of scorpion toxin bmbktx1 52 c2fwvA_ not modelled 6.2 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein mtubf_01000852; PDBTitle: crystal structure of rv0813 53 c2jmzA_ not modelled 6.1 13 PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein mj0781; PDBTitle: solution structure of a klba intein precursor from2 methanococcus jannaschii 54 d1eaic_ not modelled 6.0 50 Fold:Serine protease inhibitors Superfamily:Serine protease inhibitors Family:ATI-like 55 d1mylb_ not modelled 5.9 50 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:Arc/Mnt-like phage repressors 56 c1i4oC_ not modelled 5.9 67 PDB header:apoptosis/hydrolase Chain: C: PDB Molecule:baculoviral iap repeat-containing protein 4; PDBTitle: crystal structure of the xiap/caspase-7 complex 57 d1f86a_ not modelled 5.9 18 Fold:Prealbumin-like Superfamily:Transthyretin (synonym: prealbumin) Family:Transthyretin (synonym: prealbumin) 58 d1un7a1 not modelled 5.9 40 Fold:Composite domain of metallo-dependent hydrolases Superfamily:Composite domain of metallo-dependent hydrolases Family:N-acetylglucosamine-6-phosphate deacetylase, NagA 59 d1t11a2 not modelled 5.9 17 Fold:Ribosome binding domain-like Superfamily:Trigger factor ribosome-binding domain Family:Trigger factor ribosome-binding domain 60 c3u5ga_ not modelled 5.9 43 PDB header:ribosome Chain: A: PDB Molecule:40s ribosomal protein s0-a; PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution 61 d1oo2a_ not modelled 5.9 21 Fold:Prealbumin-like Superfamily:Transthyretin (synonym: prealbumin) Family:Transthyretin (synonym: prealbumin) 62 c1i7wB_ not modelled 5.8 40 PDB header:cell adhesion Chain: B: PDB Molecule:epithelial-cadherin; PDBTitle: beta-catenin/phosphorylated e-cadherin complex 63 c2xzn5_ not modelled 5.8 43 PDB header:ribosome Chain: 5: PDB Molecule:ribosomal protein s26e containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 64 c2zw2B_ not modelled 5.6 17 PDB header:ligase Chain: B: PDB Molecule:putative uncharacterized protein sts178; PDBTitle: crystal structure of formylglycinamide ribonucleotide amidotransferase2 iii from sulfolobus tokodaii (stpurs) 65 c2dadA_ not modelled 5.6 20 PDB header:oncoprotein Chain: A: PDB Molecule:absent in melanoma 1 protein; PDBTitle: solution structure of the fifth crystall domain of the non-2 lens protein, absent in melanoma 1 66 c3batB_ not modelled 5.6 33 PDB header:contractile protein Chain: B: PDB Molecule:myosin heavy chain, striated muscle/general PDBTitle: crystal structure of the n-terminal region of the scallop2 myosin rod, monoclinic (p21) form 67 d2uubc1 not modelled 5.4 36 Fold:Alpha-lytic protease prodomain-like Superfamily:Prokaryotic type KH domain (KH-domain type II) Family:Prokaryotic type KH domain (KH-domain type II) 68 d1kgia_ not modelled 5.3 18 Fold:Prealbumin-like Superfamily:Transthyretin (synonym: prealbumin) Family:Transthyretin (synonym: prealbumin) 69 d1okia1 not modelled 5.3 44 Fold:gamma-Crystallin-like Superfamily:gamma-Crystallin-like Family:Crystallins/Ca-binding development proteins 70 d1ataa_ not modelled 5.2 42 Fold:Serine protease inhibitors Superfamily:Serine protease inhibitors Family:ATI-like 71 d1rhoa_ not modelled 5.2 14 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:RhoGDI-like 72 d1u58a2 not modelled 5.1 38 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 73 d1t6ca2 not modelled 5.1 21 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Ppx/GppA phosphatase