Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionP26646
DateThu Jan 5 11:43:02 GMT 2012
Unique Job ID51628e9de906406f

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c1o89A_
Top template information
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:yhdh;
PDBTitle: crystal structure of e. coli k-12 yhdh
Confidence and coverage
Confidence:100.0% Coverage: 99%
320 residues ( 99% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMI
Secondary structure 
SS confidence 
Disorder  ?
?
??
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  PGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGLDARK
Secondary structure 
SS confidence 
Disorder 
?
?
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  AMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGR
Secondary structure 
SS confidence 
Disorder 
?????
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  ESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAAC
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........250.........260.........270.........280.........290.........300
Sequence  GLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRAQAWQRLVADLPESFYTQAAKEISL
Secondary structure 
SS confidence 
Disorder 
?
?
????
Disorder confidence 
 
   .........310.........320....
Sequence  SEAPNFAEAIINNQIQGRTLVKVN
Secondary structure 
SS confidence 
Disorder 
?
??
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 1o89 chain A

3D model

Region: 1 - 323
Aligned: 320
Modelled: 323
Confidence: 100.0%
Identity: 99%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:yhdh;
PDBTitle: crystal structure of e. coli k-12 yhdh

Phyre2

PDB 3krt chain C

3D model

Region: 1 - 324
Aligned: 317
Modelled: 318
Confidence: 100.0%
Identity: 22%
PDB header:oxidoreductase
Chain: C: PDB Molecule:crotonyl coa reductase;
PDBTitle: crystal structure of putative crotonyl coa reductase from streptomyces2 coelicolor a3(2)

Phyre2

PDB 1y9e chain B

3D model

Region: 1 - 323
Aligned: 323
Modelled: 323
Confidence: 100.0%
Identity: 47%
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein yhfp;
PDBTitle: crystal structure of bacillus subtilis protein yhfp with2 nad bound

Phyre2

PDB 1xa0 chain B

3D model

Region: 1 - 323
Aligned: 314
Modelled: 323
Confidence: 100.0%
Identity: 47%
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative nadph dependent oxidoreductases;
PDBTitle: crystal structure of mcsg target apc35536 from bacillus2 stearothermophilus

Phyre2

PDB 4a10 chain A

3D model

Region: 1 - 324
Aligned: 306
Modelled: 318
Confidence: 100.0%
Identity: 22%
PDB header:oxidoreductase
Chain: A: PDB Molecule:octenoyl-coa reductase/carboxylase;
PDBTitle: apo-structure of 2-octenoyl-coa carboxylase reductase cinf from2 streptomyces sp.

Phyre2

PDB 3uog chain B

3D model

Region: 1 - 322
Aligned: 311
Modelled: 312
Confidence: 100.0%
Identity: 23%
PDB header:oxidoreductase
Chain: B: PDB Molecule:alcohol dehydrogenase;
PDBTitle: crystal structure of putative alcohol dehydrogenase from sinorhizobium2 meliloti 1021

Phyre2

PDB 2j8z chain A

3D model

Region: 1 - 324
Aligned: 315
Modelled: 315
Confidence: 100.0%
Identity: 18%
PDB header:oxidoreductase
Chain: A: PDB Molecule:quinone oxidoreductase;
PDBTitle: crystal structure of human p53 inducible oxidoreductase (2 tp53i3,pig3)

Phyre2

PDB 2vwp chain A

3D model

Region: 1 - 324
Aligned: 317
Modelled: 324
Confidence: 100.0%
Identity: 16%
PDB header:oxidoreductase
Chain: A: PDB Molecule:glucose dehydrogenase;
PDBTitle: haloferax mediterranei glucose dehydrogenase in complex2 with nadph and zn.

Phyre2

PDB 2eih chain A

3D model

Region: 1 - 323
Aligned: 314
Modelled: 323
Confidence: 100.0%
Identity: 20%
PDB header:oxidoreductase
Chain: A: PDB Molecule:alcohol dehydrogenase;
PDBTitle: crystal structure of nad-dependent alcohol dehydrogenase

Phyre2

PDB 1ma0 chain B

3D model

Region: 1 - 323
Aligned: 316
Modelled: 320
Confidence: 100.0%
Identity: 15%
PDB header:oxidoreductase
Chain: B: PDB Molecule:glutathione-dependent formaldehyde dehydrogenase;
PDBTitle: ternary complex of human glutathione-dependent formaldehyde2 dehydrogenase with nad+ and dodecanoic acid

Phyre2

PDB 1pl6 chain A

3D model

Region: 1 - 324
Aligned: 310
Modelled: 322
Confidence: 100.0%
Identity: 16%
PDB header:oxidoreductase
Chain: A: PDB Molecule:sorbitol dehydrogenase;
PDBTitle: human sdh/nadh/inhibitor complex

Phyre2

PDB 1yb5 chain A

3D model

Region: 1 - 323
Aligned: 315
Modelled: 323
Confidence: 100.0%
Identity: 18%
PDB header:oxidoreductase
Chain: A: PDB Molecule:quinone oxidoreductase;
PDBTitle: crystal structure of human zeta-crystallin with bound nadp

Phyre2

PDB 1f8f chain A

3D model

Region: 1 - 324
Aligned: 313
Modelled: 318
Confidence: 100.0%
Identity: 19%
PDB header:oxidoreductase
Chain: A: PDB Molecule:benzyl alcohol dehydrogenase;
PDBTitle: crystal structure of benzyl alcohol dehydrogenase from acinetobacter2 calcoaceticus

Phyre2

PDB 1cdo chain B

3D model

Region: 1 - 323
Aligned: 316
Modelled: 320
Confidence: 100.0%
Identity: 11%
PDB header:oxidoreductase (ch-oh(d)-nad(a))
Chain: B: PDB Molecule:alcohol dehydrogenase;
PDBTitle: alcohol dehydrogenase (e.c.1.1.1.1) (ee isozyme) complexed with2 nicotinamide adenine dinucleotide (nad), and zinc

Phyre2

PDB 2cf5 chain A

3D model

Region: 1 - 324
Aligned: 314
Modelled: 318
Confidence: 100.0%
Identity: 15%
PDB header:oxidoreductase
Chain: A: PDB Molecule:cinnamyl alcohol dehydrogenase;
PDBTitle: crystal structures of the arabidopsis cinnamyl alcohol2 dehydrogenases, atcad5

Phyre2

PDB 1n9g chain F

3D model

Region: 1 - 322
Aligned: 322
Modelled: 322
Confidence: 100.0%
Identity: 17%
PDB header:hydrolase
Chain: F: PDB Molecule:2,4-dienoyl-coa reductase;
PDBTitle: mitochondrial 2-enoyl thioester reductase etr1p/etr2p2 heterodimer from candida tropicalis

Phyre2

PDB 2vcy chain A

3D model

Region: 1 - 323
Aligned: 315
Modelled: 318
Confidence: 100.0%
Identity: 19%
PDB header:oxidoreductase
Chain: A: PDB Molecule:trans-2-enoyl-coa reductase;
PDBTitle: crystal structure of 2-enoyl thioester reductase of human2 fas ii

Phyre2

PDB 2dph chain A

3D model

Region: 1 - 324
Aligned: 312
Modelled: 322
Confidence: 100.0%
Identity: 16%
PDB header:oxidoreductase
Chain: A: PDB Molecule:formaldehyde dismutase;
PDBTitle: crystal structure of formaldehyde dismutase

Phyre2

PDB 1hf3 chain A

3D model

Region: 1 - 322
Aligned: 314
Modelled: 319
Confidence: 100.0%
Identity: 12%
PDB header:oxidoreductase
Chain: A: PDB Molecule:alcohol dehydrogenase e chain;
PDBTitle: atomic x-ray structure of liver alcohol dehydrogenase2 containing cadmium and a hydroxide adduct to nadh

Phyre2

PDB 3cos chain D

3D model

Region: 1 - 321
Aligned: 315
Modelled: 318
Confidence: 100.0%
Identity: 13%
PDB header:oxidoreductase
Chain: D: PDB Molecule:alcohol dehydrogenase 4;
PDBTitle: crystal structure of human class ii alcohol dehydrogenase (adh4) in2 complex with nad and zn

Phyre2
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c1o89A_
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c3krtC_
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c1y9eB_
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c1xa0B_
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c4a10A_
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c3uogB_
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c2j8zA_
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c2vwpA_
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c2eihA_
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c1ma0B_
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c1pl6A_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1o89A_
100.0 99 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:yhdh;
PDBTitle: crystal structure of e. coli k-12 yhdh
2c3krtC_
100.0 22 PDB header:oxidoreductase
Chain: C: PDB Molecule:crotonyl coa reductase;
PDBTitle: crystal structure of putative crotonyl coa reductase from streptomyces2 coelicolor a3(2)
3c1y9eB_
100.0 47 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein yhfp;
PDBTitle: crystal structure of bacillus subtilis protein yhfp with2 nad bound
4c1xa0B_
100.0 47 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative nadph dependent oxidoreductases;
PDBTitle: crystal structure of mcsg target apc35536 from bacillus2 stearothermophilus
5c4a10A_
100.0 22 PDB header:oxidoreductase
Chain: A: PDB Molecule:octenoyl-coa reductase/carboxylase;
PDBTitle: apo-structure of 2-octenoyl-coa carboxylase reductase cinf from2 streptomyces sp.
6c3uogB_
100.0 23 PDB header:oxidoreductase
Chain: B: PDB Molecule:alcohol dehydrogenase;
PDBTitle: crystal structure of putative alcohol dehydrogenase from sinorhizobium2 meliloti 1021
7c2j8zA_
100.0 18 PDB header:oxidoreductase
Chain: A: PDB Molecule:quinone oxidoreductase;
PDBTitle: crystal structure of human p53 inducible oxidoreductase (2 tp53i3,pig3)
8c2vwpA_
100.0 16 PDB header:oxidoreductase
Chain: A: PDB Molecule:glucose dehydrogenase;
PDBTitle: haloferax mediterranei glucose dehydrogenase in complex2 with nadph and zn.
9c2eihA_
100.0 20 PDB header:oxidoreductase
Chain: A: PDB Molecule:alcohol dehydrogenase;
PDBTitle: crystal structure of nad-dependent alcohol dehydrogenase
10c1ma0B_
100.0 15 PDB header:oxidoreductase
Chain: B: PDB Molecule:glutathione-dependent formaldehyde dehydrogenase;
PDBTitle: ternary complex of human glutathione-dependent formaldehyde2 dehydrogenase with nad+ and dodecanoic acid
11c1pl6A_
100.0 16 PDB header:oxidoreductase
Chain: A: PDB Molecule:sorbitol dehydrogenase;
PDBTitle: human sdh/nadh/inhibitor complex
12c1yb5A_
100.0 18 PDB header:oxidoreductase
Chain: A: PDB Molecule:quinone oxidoreductase;
PDBTitle: crystal structure of human zeta-crystallin with bound nadp
13c1f8fA_
100.0 19 PDB header:oxidoreductase
Chain: A: PDB Molecule:benzyl alcohol dehydrogenase;
PDBTitle: crystal structure of benzyl alcohol dehydrogenase from acinetobacter2 calcoaceticus
14c1cdoB_
100.0 11 PDB header:oxidoreductase (ch-oh(d)-nad(a))
Chain: B: PDB Molecule:alcohol dehydrogenase;
PDBTitle: alcohol dehydrogenase (e.c.1.1.1.1) (ee isozyme) complexed with2 nicotinamide adenine dinucleotide (nad), and zinc
15c2cf5A_
100.0 15 PDB header:oxidoreductase
Chain: A: PDB Molecule:cinnamyl alcohol dehydrogenase;
PDBTitle: crystal structures of the arabidopsis cinnamyl alcohol2 dehydrogenases, atcad5
16c1n9gF_
100.0 17 PDB header:hydrolase
Chain: F: PDB Molecule:2,4-dienoyl-coa reductase;
PDBTitle: mitochondrial 2-enoyl thioester reductase etr1p/etr2p2 heterodimer from candida tropicalis
17c2vcyA_
100.0 19 PDB header:oxidoreductase
Chain: A: PDB Molecule:trans-2-enoyl-coa reductase;
PDBTitle: crystal structure of 2-enoyl thioester reductase of human2 fas ii
18c2dphA_
100.0 16 PDB header:oxidoreductase
Chain: A: PDB Molecule:formaldehyde dismutase;
PDBTitle: crystal structure of formaldehyde dismutase
19c1hf3A_
100.0 12 PDB header:oxidoreductase
Chain: A: PDB Molecule:alcohol dehydrogenase e chain;
PDBTitle: atomic x-ray structure of liver alcohol dehydrogenase2 containing cadmium and a hydroxide adduct to nadh
20c3cosD_
100.0 13 PDB header:oxidoreductase
Chain: D: PDB Molecule:alcohol dehydrogenase 4;
PDBTitle: crystal structure of human class ii alcohol dehydrogenase (adh4) in2 complex with nad and zn
21c2dfvB_
not modelled 100.0 17 PDB header:oxidoreductase
Chain: B: PDB Molecule:probable l-threonine 3-dehydrogenase;
PDBTitle: hyperthermophilic threonine dehydrogenase from pyrococcus horikoshii
22c2hcyD_
not modelled 100.0 16 PDB header:oxidoreductase
Chain: D: PDB Molecule:alcohol dehydrogenase 1;
PDBTitle: yeast alcohol dehydrogenase i, saccharomyces cerevisiae fermentative2 enzyme
23c3ip1C_
not modelled 100.0 17 PDB header:oxidoreductase
Chain: C: PDB Molecule:alcohol dehydrogenase, zinc-containing;
PDBTitle: structure of putative alcohol dehydrogenase (tm_042) from thermotoga2 maritima
24c3iupB_
not modelled 100.0 17 PDB header:oxidoreductase
Chain: B: PDB Molecule:putative nadph:quinone oxidoreductase;
PDBTitle: crystal structure of putative nadph:quinone oxidoreductase2 (yp_296108.1) from ralstonia eutropha jmp134 at 1.70 a resolution
25c3jynA_
not modelled 100.0 18 PDB header:oxidoreductase
Chain: A: PDB Molecule:quinone oxidoreductase;
PDBTitle: crystal structures of pseudomonas syringae pv. tomato dc30002 quinone oxidoreductase complexed with nadph
26c1kolA_
not modelled 100.0 16 PDB header:oxidoreductase
Chain: A: PDB Molecule:formaldehyde dehydrogenase;
PDBTitle: crystal structure of formaldehyde dehydrogenase
27c3pi7A_
not modelled 100.0 16 PDB header:oxidoreductase
Chain: A: PDB Molecule:nadh oxidoreductase;
PDBTitle: crystal structure of a putative nadph:quinone reductase (mll3093) from2 mesorhizobium loti at 1.71 a resolution
28c3fbgA_
not modelled 100.0 15 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative arginate lyase;
PDBTitle: crystal structure of a putative arginate lyase from staphylococcus2 haemolyticus
29c2cdaA_
not modelled 100.0 16 PDB header:oxidoreductase
Chain: A: PDB Molecule:glucose dehydrogenase;
PDBTitle: sulfolobus solfataricus glucose dehydrogenase 1 in complex2 with nadp
30c1yqxB_
not modelled 100.0 16 PDB header:oxidoreductase
Chain: B: PDB Molecule:sinapyl alcohol dehydrogenase;
PDBTitle: sinapyl alcohol dehydrogenase at 2.5 angstrom resolution
31c3tqhA_
not modelled 100.0 21 PDB header:oxidoreductase
Chain: A: PDB Molecule:quinone oxidoreductase;
PDBTitle: structure of the quinone oxidoreductase from coxiella burnetii
32c1h2bA_
not modelled 100.0 20 PDB header:oxidoreductase
Chain: A: PDB Molecule:alcohol dehydrogenase;
PDBTitle: crystal structure of the alcohol dehydrogenase from the2 hyperthermophilic archaeon aeropyrum pernix at 1.65a3 resolution
33c1wlyA_
not modelled 100.0 18 PDB header:oxidoreductase
Chain: A: PDB Molecule:2-haloacrylate reductase;
PDBTitle: crystal structure of 2-haloacrylate reductase
34c3gazA_
not modelled 100.0 22 PDB header:oxidoreductase
Chain: A: PDB Molecule:alcohol dehydrogenase superfamily protein;
PDBTitle: crystal structure of an alcohol dehydrogenase superfamily protein from2 novosphingobium aromaticivorans
35c3b70A_
not modelled 100.0 15 PDB header:oxidoreductase
Chain: A: PDB Molecule:enoyl reductase;
PDBTitle: crystal structure of aspergillus terreus trans-acting lovastatin2 polyketide enoyl reductase (lovc) with bound nadp
36c2xaaC_
not modelled 100.0 17 PDB header:oxidoreductase
Chain: C: PDB Molecule:secondary alcohol dehydrogenase;
PDBTitle: alcohol dehydrogenase adh-'a' from rhodococcus ruber dsm2 44541 at ph 8.5 in complex with nad and butane-1,4-diol
37c1qorA_
not modelled 100.0 17 PDB header:oxidoreductase
Chain: A: PDB Molecule:quinone oxidoreductase;
PDBTitle: crystal structure of escherichia coli quinone2 oxidoreductase complexed with nadph
38c1p0fA_
not modelled 100.0 14 PDB header:oxidoreductase
Chain: A: PDB Molecule:nadp-dependent alcohol dehydrogenase;
PDBTitle: crystal structure of the binary complex: nadp(h)-dependent vertebrate2 alcohol dehydrogenase (adh8) with the cofactor nadp
39c2ejvA_
not modelled 100.0 13 PDB header:oxidoreductase
Chain: A: PDB Molecule:l-threonine 3-dehydrogenase;
PDBTitle: crystal structure of threonine 3-dehydrogenase complexed with nad+
40c2c0cB_
not modelled 100.0 18 PDB header:oxidoreductase
Chain: B: PDB Molecule:zinc binding alcohol dehydrogenase, domain
PDBTitle: structure of the mgc45594 gene product
41c1rjwA_
not modelled 100.0 19 PDB header:oxidoreductase
Chain: A: PDB Molecule:alcohol dehydrogenase;
PDBTitle: crystal structure of nad(+)-dependent alcohol dehydrogenase2 from bacillus stearothermophilus strain lld-r
42c1r37B_
not modelled 100.0 19 PDB header:oxidoreductase
Chain: B: PDB Molecule:nad-dependent alcohol dehydrogenase;
PDBTitle: alcohol dehydrogenase from sulfolobus solfataricus2 complexed with nad(h) and 2-ethoxyethanol
43c1vj0B_
not modelled 100.0 15 PDB header:oxidoreductase
Chain: B: PDB Molecule:alcohol dehydrogenase, zinc-containing;
PDBTitle: crystal structure of alcohol dehydrogenase (tm0436) from thermotoga2 maritima at 2.00 a resolution
44c1lluD_
not modelled 100.0 17 PDB header:oxidoreductase
Chain: D: PDB Molecule:alcohol dehydrogenase;
PDBTitle: the ternary complex of pseudomonas aeruginosa alcohol2 dehydrogenase with its coenzyme and weak substrate
45c1piwA_
not modelled 100.0 12 PDB header:oxidoreductase
Chain: A: PDB Molecule:hypothetical zinc-type alcohol dehydrogenase-
PDBTitle: apo and holo structures of an nadp(h)-dependent cinnamyl2 alcohol dehydrogenase from saccharomyces cerevisiae
46c1e3jA_
not modelled 100.0 16 PDB header:oxidoreductase
Chain: A: PDB Molecule:nadp(h)-dependent ketose reductase;
PDBTitle: ketose reductase (sorbitol dehydrogenase) from silverleaf2 whitefly
47c3gmsA_
not modelled 100.0 17 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative nadph:quinone reductase;
PDBTitle: crystal structure of putative nadph:quinone reductase from2 bacillus thuringiensis
48c2w4qA_
not modelled 100.0 14 PDB header:oxidoreductase
Chain: A: PDB Molecule:prostaglandin reductase 2;
PDBTitle: crystal structure of human zinc-binding alcohol2 dehydrogenase 1 (zadh1) in ternary complex with nadp and3 18beta-glycyrrhetinic acid
49c2j3iB_
not modelled 100.0 17 PDB header:oxidoreductase
Chain: B: PDB Molecule:nadp-dependent oxidoreductase p1;
PDBTitle: crystal structure of arabidopsis thaliana double bond2 reductase (at5g16970)-binary complex
50c1iz0A_
not modelled 100.0 22 PDB header:oxidoreductase
Chain: A: PDB Molecule:quinone oxidoreductase;
PDBTitle: crystal structures of the quinone oxidoreductase from2 thermus thermophilus hb8 and its complex with nadph
51c2ouiB_
not modelled 100.0 13 PDB header:oxidoreductase
Chain: B: PDB Molecule:nadp-dependent alcohol dehydrogenase;
PDBTitle: d275p mutant of alcohol dehydrogenase from protozoa entamoeba2 histolytica
52c1uufA_
not modelled 100.0 15 PDB header:oxidoreductase
Chain: A: PDB Molecule:zinc-type alcohol dehydrogenase-like protein
PDBTitle: crystal structure of a zinc-type alcohol dehydrogenase-like2 protein yahk
53c2vn8B_
not modelled 100.0 19 PDB header:receptor inhibitor
Chain: B: PDB Molecule:reticulon-4-interacting protein 1;
PDBTitle: crystal structure of human reticulon 4 interacting protein2 1 in complex with nadph
54c1zsvB_
not modelled 100.0 18 PDB header:oxidoreductase
Chain: B: PDB Molecule:nadp-dependent leukotriene b4 12-
PDBTitle: crystal structure of human nadp-dependent leukotriene b4 12-2 hydroxydehydrogenase
55c1kevB_
not modelled 100.0 14 PDB header:oxidoreductase
Chain: B: PDB Molecule:nadp-dependent alcohol dehydrogenase;
PDBTitle: structure of nadp-dependent alcohol dehydrogenase
56c3m6iA_
not modelled 100.0 16 PDB header:oxidoreductase
Chain: A: PDB Molecule:l-arabinitol 4-dehydrogenase;
PDBTitle: l-arabinitol 4-dehydrogenase
57c3gohA_
not modelled 100.0 15 PDB header:oxidoreductase
Chain: A: PDB Molecule:alcohol dehydrogenase, zinc-containing;
PDBTitle: crystal structure of alcohol dehydrogenase superfamily protein2 (np_718042.1) from shewanella oneidensis at 1.55 a resolution
58c2h6eA_
not modelled 100.0 16 PDB header:oxidoreductase
Chain: A: PDB Molecule:d-arabinose 1-dehydrogenase;
PDBTitle: crystal structure of the d-arabinose dehydrogenase from sulfolobus2 solfataricus
59d1xa0a1
not modelled 99.9 40 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
60d1o89a1
not modelled 99.9 79 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
61d1f8fa1
not modelled 99.9 10 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
62d1pl8a1
not modelled 99.9 15 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
63d1u3wa1
not modelled 99.9 7 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
64d1yb5a1
not modelled 99.8 18 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
65d1o89a2
not modelled 99.8 100 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
66d1uufa1
not modelled 99.8 14 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
67d1piwa1
not modelled 99.8 15 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
68d1tt7a1
not modelled 99.8 41 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
69d1d1ta1
not modelled 99.8 10 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
70d1p0fa1
not modelled 99.8 7 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
71d1cdoa1
not modelled 99.8 10 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
72d1gu7a1
not modelled 99.8 18 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
73d2jhfa1
not modelled 99.8 8 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
74d1ykfa1
not modelled 99.8 16 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
75d1jqba1
not modelled 99.8 18 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
76d1u3ua1
not modelled 99.8 9 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
77d1e3ia1
not modelled 99.8 11 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
78d1llua1
not modelled 99.8 22 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
79d1rjwa1
not modelled 99.8 22 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
80d1u3ta1
not modelled 99.8 10 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
81d2fzwa1
not modelled 99.8 15 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
82c2vz8B_
not modelled 99.8 15 PDB header:transferase
Chain: B: PDB Molecule:fatty acid synthase;
PDBTitle: crystal structure of mammalian fatty acid synthase
83d1jvba1
not modelled 99.8 13 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
84d1xa0a2
not modelled 99.8 53 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
85d1iz0a1
not modelled 99.7 24 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
86d1vj0a1
not modelled 99.7 13 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
87d1kola1
not modelled 99.7 18 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
88d1qora1
not modelled 99.7 12 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
89d1tt7a2
not modelled 99.7 48 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
90d1h2ba1
not modelled 99.7 17 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
91d1e3ja1
not modelled 99.7 15 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
92d1yb5a2
not modelled 99.7 21 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
93d1v3va2
not modelled 99.6 23 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
94d1v3va1
not modelled 99.6 15 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
95d1qora2
not modelled 99.6 16 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
96d1f8fa2
not modelled 99.6 20 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
97d1h2ba2
not modelled 99.6 15 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
98d1pqwa_
not modelled 99.6 16 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
99d1gu7a2
not modelled 99.5 16 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
100d1llua2
not modelled 99.5 20 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
101d1vj0a2
not modelled 99.5 14 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
102d1cdoa2
not modelled 99.5 12 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
103d1vj1a2
not modelled 99.5 19 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
104d1p0fa2
not modelled 99.5 14 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
105d1iz0a2
not modelled 99.5 21 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
106d1e3ia2
not modelled 99.5 13 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
107d2jhfa2
not modelled 99.5 12 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
108d1d1ta2
not modelled 99.4 12 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
109d1ykfa2
not modelled 99.4 16 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
110d1jvba2
not modelled 99.4 21 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
111d1rjwa2
not modelled 99.4 22 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
112d1uufa2
not modelled 99.4 20 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
113d2fzwa2
not modelled 99.4 13 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
114d1piwa2
not modelled 99.4 15 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
115d1pl8a2
not modelled 99.4 16 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
116d1jqba2
not modelled 99.4 16 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
117d1u3wa2
not modelled 99.4 13 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
118d1kola2
not modelled 99.3 12 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
119d1e3ja2
not modelled 99.2 14 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
120d1vj1a1
not modelled 98.3 17 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
 
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions
Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0