Emaill.a.kelley@imperial.ac.uk
DescriptionP0CF26
DateThu Jan 5 11:30:48 GMT 2012
Unique Job ID4cd80077a41492bb

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1d1hyva_



97.0 15 Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Retroviral integrase, catalytic domain
2d1cxqa_



96.6 16 Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Retroviral integrase, catalytic domain
3d1exqa_



96.2 12 Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Retroviral integrase, catalytic domain
4c1ex4A_



95.0 16 PDB header:viral protein
Chain: A: PDB Molecule:integrase;
PDBTitle: hiv-1 integrase catalytic core and c-terminal domain
5c1k6yB_



95.0 15 PDB header:transferase
Chain: B: PDB Molecule:integrase;
PDBTitle: crystal structure of a two-domain fragment of hiv-1 integrase
6c3f9kV_



94.3 14 PDB header:viral protein, recombination
Chain: V: PDB Molecule:integrase;
PDBTitle: two domain fragment of hiv-2 integrase in complex with ledgf ibd
7d1asua_



93.8 16 Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Retroviral integrase, catalytic domain
8d1c6va_



93.6 16 Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Retroviral integrase, catalytic domain
9c3nf9A_



91.1 16 PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:integrase;
PDBTitle: structural basis for a new mechanism of inhibition of hiv integrase2 identified by fragment screening and structure based design
10c1c0mA_



90.9 18 PDB header:transferase
Chain: A: PDB Molecule:protein (integrase);
PDBTitle: crystal structure of rsv two-domain integrase
11d1c0ma2



90.7 18 Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Retroviral integrase, catalytic domain
12c3dlrA_



89.3 11 PDB header:transferase
Chain: A: PDB Molecule:integrase;
PDBTitle: crystal structure of the catalytic core domain from pfv2 integrase
13c1bcoA_



80.3 10 PDB header:transposase
Chain: A: PDB Molecule:bacteriophage mu transposase;
PDBTitle: bacteriophage mu transposase core domain
14c3kksB_



69.6 13 PDB header:dna binding protein
Chain: B: PDB Molecule:integrase;
PDBTitle: crystal structure of catalytic core domain of biv integrase in crystal2 form ii
15d1bcoa2



60.2 11 Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:mu transposase, core domain
16c3hpgC_



47.7 14 PDB header:transferase
Chain: C: PDB Molecule:integrase;
PDBTitle: visna virus integrase (residues 1-219) in complex with ledgf2 ibd: examples of open integrase dimer-dimer interfaces
17c2k8fB_



42.7 26 PDB header:transferase/transcription
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: structural basis for the regulation of p53 function by p300
18c3he5D_



31.1 30 PDB header:de novo protein
Chain: D: PDB Molecule:synzip2;
PDBTitle: heterospecific coiled-coil pair synzip2:synzip1
19c2l14B_



17.5 26 PDB header:protein binding
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: structure of cbp nuclear coactivator binding domain in complex with2 p53 tad
20c3l2tB_



13.3 11 PDB header:recombination/dna
Chain: B: PDB Molecule:integrase;
PDBTitle: crystal structure of the prototype foamy virus (pfv) intasome in2 complex with magnesium and mk0518 (raltegravir)
21c1q2iA_



not modelled 13.3 21 PDB header:antitumor protein
Chain: A: PDB Molecule:pnc27;
PDBTitle: nmr solution structure of a peptide from the mdm-2 binding2 domain of the p53 protein that is selectively cytotoxic to3 cancer cells
22c3dacB_



not modelled 9.6 33 PDB header:cell cycle
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: structure of the human mdmx protein bound to the p53 tumor2 suppressor transactivation domain
23c2glfB_



not modelled 9.5 11 PDB header:hydrolase
Chain: B: PDB Molecule:probable m18-family aminopeptidase 1;
PDBTitle: crystal structure of aminipeptidase (m18 family) from thermotoga2 maritima
24c3dacP_



not modelled 9.4 33 PDB header:cell cycle
Chain: P: PDB Molecule:cellular tumor antigen p53;
PDBTitle: structure of the human mdmx protein bound to the p53 tumor2 suppressor transactivation domain
25d1v6fa_



not modelled 9.4 9 Fold:Gelsolin-like
Superfamily:Actin depolymerizing proteins
Family:Cofilin-like
26c3a2aC_



not modelled 9.3 69 PDB header:transport protein
Chain: C: PDB Molecule:voltage-gated hydrogen channel 1;
PDBTitle: the structure of the carboxyl-terminal domain of the human voltage-2 gated proton channel hv1
27d1flga_



not modelled 7.8 23 Fold:8-bladed beta-propeller
Superfamily:Quinoprotein alcohol dehydrogenase-like
Family:Quinoprotein alcohol dehydrogenase-like
28d1xb4a1



not modelled 7.7 43 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Vacuolar sorting protein domain
29d1e42a2



not modelled 7.4 5 Fold:Subdomain of clathrin and coatomer appendage domain
Superfamily:Subdomain of clathrin and coatomer appendage domain
Family:Clathrin adaptor appendage, alpha and beta chain-specific domain
30c1xb4C_



not modelled 7.1 43 PDB header:unknown function
Chain: C: PDB Molecule:hypothetical 23.6 kda protein in yuh1-ura8
PDBTitle: crystal structure of subunit vps25 of the endosomal2 trafficking complex escrt-ii
31c2obnA_



not modelled 7.1 21 PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of a duf1611 family protein (ava_3511) from anabaena2 variabilis atcc 29413 at 2.30 a resolution
32d2bg1a1



not modelled 7.0 18 Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
33d1lyva_



not modelled 6.6 22 Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Higher-molecular-weight phosphotyrosine protein phosphatases
34c3t38B_



not modelled 6.5 15 PDB header:oxidoreductase
Chain: B: PDB Molecule:arsenate reductase;
PDBTitle: corynebacterium glutamicum thioredoxin-dependent arsenate reductase2 cg_arsc1'
35d1ce7b2



not modelled 6.4 31 Fold:beta-Trefoil
Superfamily:Ricin B-like lectins
Family:Ricin B-like
36c2zmeD_



not modelled 6.2 43 PDB header:protein transport
Chain: D: PDB Molecule:vacuolar protein-sorting-associated protein 25;
PDBTitle: integrated structural and functional model of the human escrt-ii2 complex
37c1o7dE_



not modelled 6.1 31 PDB header:hydrolase
Chain: E: PDB Molecule:lysosomal alpha-mannosidase;
PDBTitle: the structure of the bovine lysosomal a-mannosidase2 suggests a novel mechanism for low ph activation
38d1y7ea2



not modelled 6.1 11 Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
39c3cuqD_



not modelled 6.0 43 PDB header:protein transport
Chain: D: PDB Molecule:vacuolar protein-sorting-associated protein 25;
PDBTitle: integrated structural and functional model of the human escrt-ii2 complex
40c2zkrl_



not modelled 5.9 16 PDB header:ribosomal protein/rna
Chain: L: PDB Molecule:rna expansion segment es20;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
41d2c5wb1



not modelled 5.7 18 Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
42c3aa0C_



not modelled 5.6 63 PDB header:protein binding
Chain: C: PDB Molecule:21mer peptide from leucine-rich repeat-containing protein
PDBTitle: crystal structure of actin capping protein in complex with the cp-2 binding motif derived from carmil
43c2wmyH_



not modelled 5.4 19 PDB header:hydrolase
Chain: H: PDB Molecule:putative acid phosphatase wzb;
PDBTitle: crystal structure of the tyrosine phosphatase wzb from2 escherichia coli k30 in complex with sulphate.
44c3lk2T_



not modelled 5.2 63 PDB header:protein binding
Chain: T: PDB Molecule:leucine-rich repeat-containing protein 16a;
PDBTitle: crystal structure of capz bound to the uncapping motif from carmil
45d1vqqa3



not modelled 5.2 18 Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
46c3pp5A_



not modelled 5.1 19 PDB header:structural protein
Chain: A: PDB Molecule:brk1;
PDBTitle: high-resolution structure of the trimeric scar/wave complex precursor2 brk1
47d2olua2



not modelled 5.1 24 Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase