Email l.a.kelley@imperial.ac.uk Description P0ADU5 Date Thu Jan 5 11:21:52 GMT 2012 Unique Job ID 3d8a265d58a59ce0

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1nnxa_ 100.0 97 Fold:OB-fold Superfamily:Hypothetical protein YgiW Family:Hypothetical protein YgiW 2 d1l0wa1 97.4 17 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Anticodon-binding domain 3 d1b8aa1 97.4 17 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Anticodon-binding domain 4 c1wydB_ 97.3 17 PDB header:ligase Chain: B: PDB Molecule:hypothetical aspartyl-trna synthetase; PDBTitle: crystal structure of aspartyl-trna synthetase from sulfolobus tokodaii 5 c1b8aB_ 97.2 18 PDB header:ligase Chain: B: PDB Molecule:protein (aspartyl-trna synthetase); PDBTitle: aspartyl-trna synthetase 6 d1c0aa1 97.1 19 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Anticodon-binding domain 7 d1n9wa1 97.0 20 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Anticodon-binding domain 8 c3bjuB_ 96.8 15 PDB header:ligase Chain: B: PDB Molecule:lysyl-trna synthetase; PDBTitle: crystal structure of tetrameric form of human lysyl-trna2 synthetase 9 c1eqrC_ 96.8 17 PDB header:ligase Chain: C: PDB Molecule:aspartyl-trna synthetase; PDBTitle: crystal structure of free aspartyl-trna synthetase from2 escherichia coli 10 c3e9hB_ 96.8 16 PDB header:ligase Chain: B: PDB Molecule:lysyl-trna synthetase; PDBTitle: lysyl-trna synthetase from bacillus stearothermophilus2 complexed with l-lysylsulfamoyl adenosine 11 c3m4qA_ 96.7 19 PDB header:ligase Chain: A: PDB Molecule:asparaginyl-trna synthetase, putative; PDBTitle: entamoeba histolytica asparaginyl-trna synthetase (asnrs) 12 d1e1oa1 96.6 16 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Anticodon-binding domain 13 c3i7fA_ 96.6 23 PDB header:ligase Chain: A: PDB Molecule:aspartyl-trna synthetase; PDBTitle: aspartyl trna synthetase from entamoeba histolytica 14 d1bbua1 96.5 15 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Anticodon-binding domain 15 c3kf6A_ 96.5 19 PDB header:structural protein Chain: A: PDB Molecule:protein stn1; PDBTitle: crystal structure of s. pombe stn1-ten1 complex 16 c1n9wA_ 96.4 19 PDB header:biosynthetic protein Chain: A: PDB Molecule:aspartyl-trna synthetase 2; PDBTitle: crystal structure of the non-discriminating and archaeal-2 type aspartyl-trna synthetase from thermus thermophilus 17 d1eova1 96.2 15 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Anticodon-binding domain 18 c1x55A_ 96.2 16 PDB header:ligase Chain: A: PDB Molecule:asparaginyl-trna synthetase; PDBTitle: crystal structure of asparaginyl-trna synthetase from pyrococcus2 horikoshii complexed with asparaginyl-adenylate analogue 19 c1e22A_ 96.0 18 PDB header:ligase Chain: A: PDB Molecule:lysyl-trna synthetase; PDBTitle: lysyl-trna synthetase (lysu) hexagonal form complexed with2 lysine and the non-hydrolysable atp analogue amp-pcp 20 d2pi2a1 96.0 21 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 21 c1efwA_ not modelled 95.7 17 PDB header:ligase/rna Chain: A: PDB Molecule:aspartyl-trna synthetase; PDBTitle: crystal structure of aspartyl-trna synthetase from thermus2 thermophilus complexed to trnaasp from escherichia coli 22 c2pi2A_ not modelled 95.6 21 PDB header:replication, dna binding protein Chain: A: PDB Molecule:replication protein a 32 kda subunit; PDBTitle: full-length replication protein a subunits rpa14 and rpa32 23 c2xgtB_ not modelled 95.2 21 PDB header:ligase Chain: B: PDB Molecule:asparaginyl-trna synthetase, cytoplasmic; PDBTitle: asparaginyl-trna synthetase from brugia malayi complexed2 with the sulphamoyl analogue of asparaginyl-adenylate 24 c3mxnB_ not modelled 95.0 17 PDB header:replication Chain: B: PDB Molecule:recq-mediated genome instability protein 2; PDBTitle: crystal structure of the rmi core complex 25 c3e0eA_ not modelled 94.9 23 PDB header:replication Chain: A: PDB Molecule:replication protein a; PDBTitle: crystal structure of a domain of replication protein a from2 methanococcus maripaludis. northeast structural genomics3 targe mrr110b 26 c1asyA_ not modelled 94.6 17 PDB header:complex (aminoacyl-trna synthase/trna) Chain: A: PDB Molecule:aspartyl-trna synthetase; PDBTitle: class ii aminoacyl transfer rna synthetases: crystal2 structure of yeast aspartyl-trna synthetase complexed with3 trna asp 27 d1krta_ not modelled 93.0 15 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Anticodon-binding domain 28 c3dm3A_ not modelled 92.5 18 PDB header:replication Chain: A: PDB Molecule:replication factor a; PDBTitle: crystal structure of a domain of a replication factor a2 protein, from methanocaldococcus jannaschii. northeast3 structural genomics target mjr118e 29 d1gm5a2 not modelled 91.8 14 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:RecG "wedge" domain 30 d2oq0a1 not modelled 91.1 16 Fold:OB-fold Superfamily:HIN-2000 domain-like Family:HIN-200/IF120x domain 31 c3kf8C_ not modelled 90.2 29 PDB header:structural protein Chain: C: PDB Molecule:protein stn1; PDBTitle: crystal structure of c. tropicalis stn1-ten1 complex 32 c2oq0D_ not modelled 86.0 16 PDB header:protein binding Chain: D: PDB Molecule:gamma-interferon-inducible protein ifi-16; PDBTitle: crystal structure of the first hin-200 domain of interferon-inducible2 protein 16 33 c3b6yB_ not modelled 85.4 19 PDB header:protein binding Chain: B: PDB Molecule:gamma-interferon-inducible protein ifi-16; PDBTitle: crystal structure of the second hin-200 domain of interferon-inducible2 protein 16 34 c2k50A_ not modelled 81.2 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:replication factor a related protein; PDBTitle: solution nmr structure of the replication factor a related2 protein from methanobacterium thermoautotrophicum.3 northeast structural genomics target tr91a. 35 c3e0jG_ not modelled 79.5 18 PDB header:transferase Chain: G: PDB Molecule:dna polymerase subunit delta-2; PDBTitle: x-ray structure of the complex of regulatory subunits of2 human dna polymerase delta 36 c2k75A_ not modelled 74.2 16 PDB header:dna binding protein Chain: A: PDB Molecule:uncharacterized protein ta0387; PDBTitle: solution nmr structure of the ob domain of ta0387 from2 thermoplasma acidophilum. northeast structural genomics3 consortium target tar80b. 37 c1gm5A_ not modelled 71.5 14 PDB header:helicase Chain: A: PDB Molecule:recg; PDBTitle: structure of recg bound to three-way dna junction 38 d2pi2e1 not modelled 54.5 14 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 39 c3hbcA_ not modelled 51.4 15 PDB header:hydrolase Chain: A: PDB Molecule:choloylglycine hydrolase; PDBTitle: crystal structure of choloylglycine hydrolase from bacteroides2 thetaiotaomicron vpi 40 c2pqaB_ not modelled 49.9 14 PDB header:replication Chain: B: PDB Molecule:replication protein a 14 kda subunit; PDBTitle: crystal structure of full-length human rpa 14/32 heterodimer 41 c2kenA_ not modelled 46.1 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein; PDBTitle: solution nmr structure of the ob domain (residues 67-166)2 of mm0293 from methanosarcina mazei. northeast structural3 genomics consortium target mar214a. 42 d1t9ha1 not modelled 44.7 23 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 43 c2hezB_ not modelled 38.9 17 PDB header:hydrolase Chain: B: PDB Molecule:bile salt hydrolase; PDBTitle: bifidobacterium longum bile salt hydrolase 44 c3cp0A_ not modelled 37.7 21 PDB header:membrane protein Chain: A: PDB Molecule:membrane protein implicated in regulation of membrane PDBTitle: crystal structure of the soluble domain of membrane protein implicated2 in regulation of membrane protease activity from corynebacterium3 glutamicum 45 d1cz5a1 not modelled 37.0 23 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Cdc48 N-terminal domain-like 46 c2k14A_ not modelled 36.9 20 PDB header:unknown function Chain: A: PDB Molecule:yuaf protein; PDBTitle: solution structure of the soluble domain of the nfed2 protein yuaf from bacillus subtilis 47 d1jt8a_ not modelled 36.6 17 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 48 c3h43F_ not modelled 32.2 21 PDB header:hydrolase Chain: F: PDB Molecule:proteasome-activating nucleotidase; PDBTitle: n-terminal domain of the proteasome-activating nucleotidase2 of methanocaldococcus jannaschii 49 c3ka5A_ not modelled 31.1 28 PDB header:chaperone Chain: A: PDB Molecule:ribosome-associated protein y (psrp-1); PDBTitle: crystal structure of ribosome-associated protein y (psrp-1)2 from clostridium acetobutylicum. northeast structural3 genomics consortium target id car123a 50 c2wg6L_ not modelled 27.7 19 PDB header:transcription,hydrolase Chain: L: PDB Molecule:general control protein gcn4, PDBTitle: proteasome-activating nucleotidase (pan) n-domain (57-134)2 from archaeoglobus fulgidus fused to gcn4, p61a mutant 51 c3obyB_ not modelled 27.2 18 PDB header:hydrolase Chain: B: PDB Molecule:protein pelota homolog; PDBTitle: crystal structure of archaeoglobus fulgidus pelota reveals inter-2 domain structural plasticity 52 d2pvaa_ not modelled 25.1 44 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Penicillin V acylase 53 d2do3a1 not modelled 25.0 21 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:SPT5 KOW domain-like 54 d2cs7a1 not modelled 24.6 16 Fold:IL8-like Superfamily:PhtA domain-like Family:PhtA domain-like 55 d2exda1 not modelled 24.1 18 Fold:OB-fold Superfamily:NfeD domain-like Family:NfeD domain-like 56 c2oqkA_ not modelled 24.0 19 PDB header:translation Chain: A: PDB Molecule:putative translation initiation factor eif-1a; PDBTitle: crystal structure of putative cryptosporidium parvum translation2 initiation factor eif-1a 57 c2bx6A_ not modelled 23.8 10 PDB header:transduction protein Chain: A: PDB Molecule:xrp2 protein; PDBTitle: crystal structure of the human retinitis pigmentosa2 protein 2 (rp2) 58 d1qcsa1 not modelled 23.4 17 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Cdc48 N-terminal domain-like 59 c2bjgB_ not modelled 23.3 22 PDB header:hydrolase Chain: B: PDB Molecule:choloylglycine hydrolase; PDBTitle: crystal structure of conjugated bile acid hydrolase from2 clostridium perfringens in complex with reaction products3 taurine and deoxycholate 60 d1qkia2 not modelled 22.9 27 Fold:FwdE/GAPDH domain-like Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Family:Glucose 6-phosphate dehydrogenase-like 61 c2jqoA_ not modelled 22.0 15 PDB header:structural genomics Chain: A: PDB Molecule:hypothetical protein yoba; PDBTitle: nmr solution structure of bacillus subtilis yoba 21-120:2 northeast structural genomics consortium target sr547 62 c3k2tA_ not modelled 21.4 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lmo2511 protein; PDBTitle: crystal structure of lmo2511 protein from listeria2 monocytogenes, northeast structural genomics consortium3 target lkr84a 63 c1cz5A_ not modelled 21.3 23 PDB header:hydrolase Chain: A: PDB Molecule:vcp-like atpase; PDBTitle: nmr structure of vat-n: the n-terminal domain of vat (vcp-2 like atpase of thermoplasma) 64 d1h9aa2 not modelled 21.2 33 Fold:FwdE/GAPDH domain-like Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Family:Glucose 6-phosphate dehydrogenase-like 65 c1ltlE_ not modelled 20.0 23 PDB header:replication Chain: E: PDB Molecule:dna replication initiator (cdc21/cdc54); PDBTitle: the dodecamer structure of mcm from archaeal m.2 thermoautotrophicum 66 d1vr3a1 not modelled 19.9 13 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Acireductone dioxygenase 67 c3f6hA_ not modelled 19.4 12 PDB header:transferase Chain: A: PDB Molecule:alpha-isopropylmalate synthase; PDBTitle: crystal structure of the regulatory domain of licms in2 complexed with isoleucine - type iii 68 d2vgna1 not modelled 19.0 17 Fold:Sm-like fold Superfamily:Dom34/Pelota N-terminal domain-like Family:Dom34/Pelota N-terminal domain-like 69 d1g4ma2 not modelled 18.8 12 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Arrestin/Vps26-like 70 c3e0dA_ not modelled 18.7 19 PDB header:transferase/dna Chain: A: PDB Molecule:dna polymerase iii subunit alpha; PDBTitle: insights into the replisome from the crystral structure of2 the ternary complex of the eubacterial dna polymerase iii3 alpha-subunit 71 d1sr3a_ not modelled 18.3 19 Fold:OB-fold Superfamily:Heme chaperone CcmE Family:Heme chaperone CcmE 72 c3lgjA_ not modelled 18.3 23 PDB header:dna binding protein Chain: A: PDB Molecule:single-stranded dna-binding protein; PDBTitle: crystal structure of single-stranded binding protein (ssb) from2 bartonella henselae 73 c1h9aA_ not modelled 18.3 33 PDB header:oxidoreductase (choh(d) - nad(p)) Chain: A: PDB Molecule:glucose 6-phosphate 1-dehydrogenase; PDBTitle: complex of active mutant (q365->c) of glucose 6-phosphate2 dehydrogenase from l. mesenteroides with coenzyme nadp 74 c2k5hA_ not modelled 18.1 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein; PDBTitle: solution nmr structure of protein encoded by mth693 from2 methanobacterium thermoautotrophicum: northeast structural3 genomics consortium target tt824a 75 d1ltla_ not modelled 18.0 23 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:DNA replication initiator (cdc21/cdc54) N-terminal domain 76 d1v1qa_ not modelled 17.8 13 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 77 c2vgmA_ not modelled 17.5 13 PDB header:cell cycle Chain: A: PDB Molecule:dom34; PDBTitle: structure of yeast dom34 : a protein related to translation2 termination factor erf1 and involved in no-go decay. 78 c2bhlB_ not modelled 17.5 27 PDB header:oxidoreductase (choh(d)-nadp) Chain: B: PDB Molecule:glucose-6-phosphate 1-dehydrogenase; PDBTitle: x-ray structure of human glucose-6-phosphate dehydrogenase2 (deletion variant) complexed with glucose-6-phosphate 79 d2cu3a1 not modelled 17.4 15 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:ThiS 80 d1u0la1 not modelled 17.1 24 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 81 d1o7ia_ not modelled 17.1 12 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 82 c2kl0A_ not modelled 16.5 30 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative thiamin biosynthesis this; PDBTitle: solution nmr structure of rhodopseudomonas palustris rpa3574,2 northeast structural genomics consortium (nesg) target rpr325 83 d1cf1a2 not modelled 16.2 16 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Arrestin/Vps26-like 84 c3cl5A_ not modelled 16.0 38 PDB header:hydrolase Chain: A: PDB Molecule:hemagglutinin-esterase; PDBTitle: structure of coronavirus hemagglutinin-esterase in complex with 4,9-o-2 diacetyl sialic acid 85 c1qkiE_ not modelled 15.9 27 PDB header:oxidoreductase Chain: E: PDB Molecule:glucose-6-phosphate 1-dehydrogenase; PDBTitle: x-ray structure of human glucose 6-phosphate dehydrogenase2 (variant canton r459l) complexed with structural nadp+ 86 d1j6qa_ not modelled 15.9 21 Fold:OB-fold Superfamily:Heme chaperone CcmE Family:Heme chaperone CcmE 87 c1j6qA_ not modelled 15.9 21 PDB header:chaperone Chain: A: PDB Molecule:cytochrome c maturation protein e; PDBTitle: solution structure and characterization of the heme2 chaperone ccme 88 c1tygG_ not modelled 15.9 32 PDB header:biosynthetic protein Chain: G: PDB Molecule:yjbs; PDBTitle: structure of the thiazole synthase/this complex 89 d1tygb_ not modelled 15.5 30 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:ThiS 90 c2oqcB_ not modelled 15.1 12 PDB header:hydrolase Chain: B: PDB Molecule:penicillin v acylase; PDBTitle: crystal structure of penicillin v acylase from bacillus subtilis 91 d1hr0w_ not modelled 14.7 20 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 92 d1y9qa2 not modelled 14.7 17 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Probable transcriptional regulator VC1968, C-terminal domain 93 c2pjhB_ not modelled 14.2 18 PDB header:transport protein Chain: B: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: strctural model of the p97 n domain- npl4 ubd complex 94 c3cwiA_ not modelled 14.1 25 PDB header:biosynthetic protein Chain: A: PDB Molecule:thiamine-biosynthesis protein this; PDBTitle: crystal structure of thiamine biosynthesis protein (this)2 from geobacter metallireducens. northeast structural3 genomics consortium target gmr137 95 c3i4oA_ not modelled 13.9 19 PDB header:translation Chain: A: PDB Molecule:translation initiation factor if-1; PDBTitle: crystal structure of translation initiation factor 1 from2 mycobacterium tuberculosis 96 c2gu9B_ not modelled 13.8 10 PDB header:immune system Chain: B: PDB Molecule:tetracenomycin polyketide synthesis protein; PDBTitle: crystal structure of xc5357 from xanthomonas campestris: a2 putative tetracenomycin polyketide synthesis protein3 adopting a novel cupin subfamily structure 97 c2yk5A_ not modelled 13.6 15 PDB header:transferase Chain: A: PDB Molecule:cmp-n-acetylneuraminate-beta-galactosamide-alpha-2,3- PDBTitle: structure of neisseria los-specific sialyltransferase (nst),2 in complex with cmp. 98 d1t44g_ not modelled 13.4 24 Fold:Gelsolin-like Superfamily:Actin depolymerizing proteins Family:Gelsolin-like 99 d1ah9a_ not modelled 13.2 16 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like