Email l.a.kelley@imperial.ac.uk Description P76575 Date Thu Jan 5 12:24:44 GMT 2012 Unique Job ID 3542d782480ba9fc

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2jnea1 100.0 100 Fold:Rubredoxin-like Superfamily:YfgJ-like Family:YfgJ-like 2 c2jneA_ 100.0 100 PDB header:metal binding protein Chain: A: PDB Molecule:hypothetical protein yfgj; PDBTitle: nmr structure of e.coli yfgj modelled with two zn+2 bound.2 northeast structural genomics consortium target er317. 3 c2jrpA_ 100.0 63 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative cytoplasmic protein; PDBTitle: solution nmr structure of yfgj from salmonella typhimurium2 modeled with two zn+2 bound, northeast structural genomics3 consortium target str86 4 c2eciA_ 73.7 33 PDB header:metal binding protein Chain: A: PDB Molecule:tnf receptor-associated factor 6; PDBTitle: solution structure of the ring domain of the human tnf2 receptor-associated factor 6 protein 5 c2djbA_ 72.6 23 PDB header:gene regulation Chain: A: PDB Molecule:polycomb group ring finger protein 6; PDBTitle: solution structure of the ring domain of the human polycomb2 group ring finger protein 6 6 c2ecwA_ 71.4 35 PDB header:apoptosis Chain: A: PDB Molecule:tripartite motif-containing protein 30; PDBTitle: solution structure of the zinc finger, c3hc4 type (ring2 finger) domain tripartite motif protein 30 7 d1dgsa1 70.4 32 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:NAD+-dependent DNA ligase, domain 3 8 c2f42A_ 69.6 18 PDB header:chaperone Chain: A: PDB Molecule:stip1 homology and u-box containing protein 1; PDBTitle: dimerization and u-box domains of zebrafish c-terminal of hsp702 interacting protein 9 d2jnya1 69.6 15 Fold:Trm112p-like Superfamily:Trm112p-like Family:Trm112p-like 10 c2jr6A_ 69.0 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0434 protein nma0874; PDBTitle: solution structure of upf0434 protein nma0874. northeast structural2 genomics target mr32 11 d2pk7a1 67.4 23 Fold:Trm112p-like Superfamily:Trm112p-like Family:Trm112p-like 12 c2js4A_ 66.1 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0434 protein bb2007; PDBTitle: solution nmr structure of bordetella bronchiseptica protein2 bb2007. northeast structural genomics consortium target3 bor54 13 d1rmda2 64.4 33 Fold:RING/U-box Superfamily:RING/U-box Family:RING finger domain, C3HC4 14 d1t1ha_ 62.7 20 Fold:RING/U-box Superfamily:RING/U-box Family:U-box 15 d2hf1a1 61.3 27 Fold:Trm112p-like Superfamily:Trm112p-like Family:Trm112p-like 16 c2xeuA_ 60.6 25 PDB header:transcription Chain: A: PDB Molecule:ring finger protein 4; PDBTitle: ring domain 17 c2ecvA_ 58.2 38 PDB header:ligase Chain: A: PDB Molecule:tripartite motif-containing protein 5; PDBTitle: solution structure of the zinc finger, c3hc4 type (ring2 finger) domain of tripartite motif-containing protein 5 18 c3a44D_ 57.0 31 PDB header:metal binding protein Chain: D: PDB Molecule:hydrogenase nickel incorporation protein hypa; PDBTitle: crystal structure of hypa in the dimeric form 19 d2baya1 56.2 15 Fold:RING/U-box Superfamily:RING/U-box Family:U-box 20 d1p91a_ 55.6 23 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:rRNA methyltransferase RlmA 21 c3fl2A_ not modelled 55.2 24 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase uhrf1; PDBTitle: crystal structure of the ring domain of the e3 ubiquitin-2 protein ligase uhrf1 22 c2y43B_ not modelled 54.8 28 PDB header:ligase Chain: B: PDB Molecule:e3 ubiquitin-protein ligase rad18; PDBTitle: rad18 ubiquitin ligase ring domain structure 23 d2dkta1 not modelled 54.8 27 Fold:CHY zinc finger-like Superfamily:CHY zinc finger-like Family:CHY zinc finger 24 c2cklA_ not modelled 54.6 23 PDB header:transcription Chain: A: PDB Molecule:polycomb group ring finger protein 4; PDBTitle: ring1b-bmi1 e3 catalytic domain structure 25 c3ztgA_ not modelled 52.5 30 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase rbbp6; PDBTitle: solution structure of the ring finger-like domain of2 retinoblastoma binding protein-6 (rbbp6) 26 c2kreA_ not modelled 52.4 20 PDB header:protein binding Chain: A: PDB Molecule:ubiquitin conjugation factor e4 b; PDBTitle: solution structure of e4b/ufd2a u-box domain 27 c2h0dB_ not modelled 52.3 33 PDB header:metal binding protein/ligase Chain: B: PDB Molecule:ubiquitin ligase protein ring2; PDBTitle: structure of a bmi-1-ring1b polycomb group ubiquitin ligase complex 28 c3lrqB_ not modelled 52.0 31 PDB header:ligase Chain: B: PDB Molecule:e3 ubiquitin-protein ligase trim37; PDBTitle: crystal structure of the u-box domain of human ubiquitin-2 protein ligase (e3), northeast structural genomics3 consortium target hr4604d. 29 d1jm7a_ not modelled 51.0 25 Fold:RING/U-box Superfamily:RING/U-box Family:RING finger domain, C3HC4 30 c2ecyA_ not modelled 50.6 28 PDB header:apoptosis Chain: A: PDB Molecule:tnf receptor-associated factor 3; PDBTitle: solution structure of the zinc finger, c3hc4 type (ring2 finger)" domain of tnf receptor-associated factor 3 31 c2kpiA_ not modelled 50.6 27 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein sco3027; PDBTitle: solution nmr structure of streptomyces coelicolor sco30272 modeled with zn+2 bound, northeast structural genomics3 consortium target rr58 32 d2c2la2 not modelled 50.2 18 Fold:RING/U-box Superfamily:RING/U-box Family:U-box 33 c1z6uA_ not modelled 46.8 28 PDB header:ligase Chain: A: PDB Molecule:np95-like ring finger protein isoform b; PDBTitle: np95-like ring finger protein isoform b [homo sapiens] 34 d1g25a_ not modelled 46.4 33 Fold:RING/U-box Superfamily:RING/U-box Family:RING finger domain, C3HC4 35 c2yurA_ not modelled 45.3 30 PDB header:protein binding Chain: A: PDB Molecule:retinoblastoma-binding protein 6; PDBTitle: solution structure of the ring finger of human2 retinoblastoma-binding protein 6 36 c2csyA_ not modelled 44.9 27 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:zinc finger protein 183-like 1; PDBTitle: solution structure of the ring domain of the zinc finger2 protein 183-like 1 37 d2ct7a1 not modelled 44.5 24 Fold:RING/U-box Superfamily:RING/U-box Family:IBR domain 38 d1jm7b_ not modelled 43.4 28 Fold:RING/U-box Superfamily:RING/U-box Family:RING finger domain, C3HC4 39 d2c2vv1 not modelled 43.1 18 Fold:RING/U-box Superfamily:RING/U-box Family:U-box 40 c3htkC_ not modelled 42.7 27 PDB header:recombination/replication/ligase Chain: C: PDB Molecule:e3 sumo-protein ligase mms21; PDBTitle: crystal structure of mms21 and smc5 complex 41 c2owoA_ not modelled 42.3 34 PDB header:ligase/dna Chain: A: PDB Molecule:dna ligase; PDBTitle: last stop on the road to repair: structure of e.coli dna ligase bound2 to nicked dna-adenylate 42 c2lcqA_ not modelled 40.7 30 PDB header:metal binding protein Chain: A: PDB Molecule:putative toxin vapc6; PDBTitle: solution structure of the endonuclease nob1 from p.horikoshii 43 d1bora_ not modelled 40.3 34 Fold:RING/U-box Superfamily:RING/U-box Family:RING finger domain, C3HC4 44 d1l1ta3 not modelled 39.6 21 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins 45 c3tsuA_ not modelled 39.0 29 PDB header:transferase Chain: A: PDB Molecule:transcriptional regulatory protein; PDBTitle: crystal structure of e. coli hypf with amp-pnp and carbamoyl phosphate 46 d1tdza3 not modelled 38.7 29 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins 47 d1r2za3 not modelled 38.7 21 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins 48 d1lv3a_ not modelled 38.4 15 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Hypothetical zinc finger protein YacG 49 d1ee8a3 not modelled 38.3 29 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins 50 c2ct2A_ not modelled 37.7 36 PDB header:ligase Chain: A: PDB Molecule:tripartite motif protein 32; PDBTitle: solution structure of the ring domain of the tripartite2 motif protein 32 51 c3l11A_ not modelled 37.7 33 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase rnf168; PDBTitle: crystal structure of the ring domain of rnf168 52 c1v9pB_ not modelled 37.7 33 PDB header:ligase Chain: B: PDB Molecule:dna ligase; PDBTitle: crystal structure of nad+-dependent dna ligase 53 c2ep4A_ not modelled 37.4 30 PDB header:protein binding Chain: A: PDB Molecule:ring finger protein 24; PDBTitle: solution structure of ring finger from human ring finger2 protein 24 54 d1k82a3 not modelled 37.3 21 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins 55 c2z2sD_ not modelled 36.4 30 PDB header:transcription Chain: D: PDB Molecule:anti-sigma factor chrr, transcriptional activator chrr; PDBTitle: crystal structure of rhodobacter sphaeroides sige in complex with the2 anti-sigma chrr 56 d1e4ua_ not modelled 36.0 40 Fold:RING/U-box Superfamily:RING/U-box Family:RING finger domain, C3HC4 57 d1wd2a_ not modelled 35.8 32 Fold:RING/U-box Superfamily:RING/U-box Family:RING finger domain, C3HC4 58 c1dgsB_ not modelled 35.5 32 PDB header:ligase Chain: B: PDB Molecule:dna ligase; PDBTitle: crystal structure of nad+-dependent dna ligase from t.2 filiformis 59 c2egpA_ not modelled 34.8 38 PDB header:antiviral protein Chain: A: PDB Molecule:tripartite motif-containing protein 34; PDBTitle: solution structure of the ring-finger domain from human2 tripartite motif protein 34 60 c3pihA_ not modelled 34.5 46 PDB header:hydrolase/dna Chain: A: PDB Molecule:uvrabc system protein a; PDBTitle: t. maritima uvra in complex with fluorescein-modified dna 61 d1wfka_ not modelled 34.2 25 Fold:FYVE/PHD zinc finger Superfamily:FYVE/PHD zinc finger Family:FYVE, a phosphatidylinositol-3-phosphate binding domain 62 c3kp9A_ not modelled 33.8 26 PDB header:blood coagulation,oxidoreductase Chain: A: PDB Molecule:vkorc1/thioredoxin domain protein; PDBTitle: structure of a bacterial homolog of vitamin k epoxide reductase 63 d1dl6a_ not modelled 33.5 30 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Transcriptional factor domain 64 c2cklB_ not modelled 32.7 33 PDB header:transcription Chain: B: PDB Molecule:ubiquitin ligase protein ring2; PDBTitle: ring1b-bmi1 e3 catalytic domain structure 65 c2xb1A_ not modelled 32.7 14 PDB header:transcription Chain: A: PDB Molecule:pygopus homolog 2, b-cell cll/lymphoma 9-like protein; PDBTitle: crystal structure of the human pygo2 phd finger in complex with the2 b9l hd1 domain 66 c3hugJ_ not modelled 31.9 32 PDB header:transcription/membrane protein Chain: J: PDB Molecule:probable conserved membrane protein; PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl 67 c2kdxA_ not modelled 31.3 17 PDB header:metal-binding protein Chain: A: PDB Molecule:hydrogenase/urease nickel incorporation protein PDBTitle: solution structure of hypa protein 68 c2opfA_ not modelled 31.2 21 PDB header:hydrolase/dna Chain: A: PDB Molecule:endonuclease viii; PDBTitle: crystal structure of the dna repair enzyme endonuclease-viii (nei)2 from e. coli (r252a) in complex with ap-site containing dna substrate 69 c1zr9A_ not modelled 30.7 30 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 593; PDBTitle: solution structure of a human c2h2-type zinc finger protein 70 d1zr9a1 not modelled 30.7 30 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:HkH motif-containing C2H2 finger 71 c2jmdA_ not modelled 30.3 33 PDB header:ligase Chain: A: PDB Molecule:tnf receptor-associated factor 6; PDBTitle: solution structure of the ring domain of human traf6 72 d1k3xa3 not modelled 30.1 17 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins 73 c3k7aM_ not modelled 29.8 32 PDB header:transcription Chain: M: PDB Molecule:transcription initiation factor iib; PDBTitle: crystal structure of an rna polymerase ii-tfiib complex 74 c2f5qA_ not modelled 29.7 26 PDB header:hydrolase/dna Chain: A: PDB Molecule:formamidopyrimidine-dna glycosidase; PDBTitle: catalytically inactive (e3q) mutm crosslinked to oxog:c2 containing dna cc2 75 d1wgma_ not modelled 29.3 18 Fold:RING/U-box Superfamily:RING/U-box Family:U-box 76 c2riqA_ not modelled 28.7 24 PDB header:transferase Chain: A: PDB Molecule:poly [adp-ribose] polymerase 1; PDBTitle: crystal structure of the third zinc-binding domain of human parp-1 77 c1rmdA_ not modelled 27.8 30 PDB header:dna-binding protein Chain: A: PDB Molecule:rag1; PDBTitle: rag1 dimerization domain 78 c3bvoA_ not modelled 27.0 12 PDB header:chaperone Chain: A: PDB Molecule:co-chaperone protein hscb, mitochondrial precursor; PDBTitle: crystal structure of human co-chaperone protein hscb 79 c2jvnA_ not modelled 26.9 22 PDB header:transferase Chain: A: PDB Molecule:poly [adp-ribose] polymerase 1; PDBTitle: domain c of human parp-1 80 c2gb5B_ not modelled 26.3 23 PDB header:hydrolase Chain: B: PDB Molecule:nadh pyrophosphatase; PDBTitle: crystal structure of nadh pyrophosphatase (ec 3.6.1.22) (1790429) from2 escherichia coli k12 at 2.30 a resolution 81 c3cngC_ not modelled 25.2 23 PDB header:hydrolase Chain: C: PDB Molecule:nudix hydrolase; PDBTitle: crystal structure of nudix hydrolase from nitrosomonas europaea 82 c2ectA_ not modelled 24.8 25 PDB header:metal binding protein Chain: A: PDB Molecule:ring finger protein 126; PDBTitle: solution structure of the zinc finger, c3hc4 type (ring2 finger) domain of ring finger protein 126 83 c2ecmA_ not modelled 24.5 28 PDB header:metal binding protein Chain: A: PDB Molecule:ring finger and chy zinc finger domain- PDBTitle: solution structure of the ring domain of the ring finger2 and chy zinc finger domain-containing protein 1 from mus3 musculus 84 c1loiA_ not modelled 23.6 50 PDB header:hydrolase Chain: A: PDB Molecule:cyclic 3',5'-amp specific phosphodiesterase rd1; PDBTitle: n-terminal splice region of rat c-amp phosphodiesterase,2 nmr, 7 structures 85 d1x4ka1 not modelled 23.5 25 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 86 c2vpdA_ not modelled 23.3 17 PDB header:gene regulation Chain: A: PDB Molecule:pygopus homolog 1; PDBTitle: decoding of methylated histone h3 tail by the pygo-bcl9 wnt2 signaling complex 87 c2k5rA_ not modelled 22.6 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein xf2673; PDBTitle: solution nmr structure of xf2673 from xylella fastidiosa.2 northeast structural genomics consortium target xfr39 88 c1k82D_ not modelled 21.5 21 PDB header:hydrolase/dna Chain: D: PDB Molecule:formamidopyrimidine-dna glycosylase; PDBTitle: crystal structure of e.coli formamidopyrimidine-dna2 glycosylase (fpg) covalently trapped with dna 89 c3knvA_ not modelled 21.0 30 PDB header:signaling protein Chain: A: PDB Molecule:tnf receptor-associated factor 2; PDBTitle: crystal structure of the ring and first zinc finger domains2 of traf2 90 c2l0bA_ not modelled 20.8 25 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase praja-1; PDBTitle: solution nmr structure of zinc finger domain of e3 ubiquitin-protein2 ligase praja-1 from homo sapiens, northeast structural genomics3 consortium (nesg) target hr4710b 91 d2cu8a1 not modelled 20.4 33 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 92 c2d8tA_ not modelled 20.3 20 PDB header:metal binding protein Chain: A: PDB Molecule:ring finger protein 146; PDBTitle: solution structure of the ring domain of the human ring2 finger protein 146 93 d1jnia_ not modelled 20.0 57 Fold:Multiheme cytochromes Superfamily:Multiheme cytochromes Family:Di-heme elbow motif 94 c1jniA_ not modelled 20.0 57 PDB header:oxidoreductase Chain: A: PDB Molecule:diheme cytochrome c napb; PDBTitle: structure of the napb subunit of the periplasmic nitrate2 reductase from haemophilus influenzae. 95 d3d85d1 not modelled 18.5 24 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:I set domains 96 d1pfta_ not modelled 18.5 30 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Transcriptional factor domain 97 c1ee8A_ not modelled 18.5 27 PDB header:dna binding protein Chain: A: PDB Molecule:mutm (fpg) protein; PDBTitle: crystal structure of mutm (fpg) protein from thermus thermophilus hb8 98 c2yslA_ not modelled 17.8 35 PDB header:protein binding Chain: A: PDB Molecule:tripartite motif-containing protein 31; PDBTitle: solution structure of the ring domain (1-66) from2 tripartite motif-containing protein 31 99 c1nnjA_ not modelled 17.4 29 PDB header:hydrolase Chain: A: PDB Molecule:formamidopyrimidine-dna glycosylase; PDBTitle: crystal structure complex between the lactococcus lactis fpg and an2 abasic site containing dna