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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1rmdA_

Fold library idPDB HeaderMoleculeTitle
c1rmdA_PDB header: dna-binding proteinChain: A: PDB Molecule: rag1;PDBTitle: rag1 dimerization domain


Added to library: Tue Mar 16 12:09:48 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NCSKIHLSTKLLAVDFPAHFVKSISCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFP
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Known secondary structure (DSSP)
GGGTS

GGGBSS


TB
TTT
SB
SS
TTS
T
SB
TTT

B

G
 .........80.........90.........100.........110......
Sequence TDLESPVKSFLNILNSLMVKCPAQDCNEEVSLEKYNHHVSSHKESK
Predicted secondary structure














SS confidence













































Known secondary structure (DSSP) GG
B





STT


TS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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