Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	K	Q	P	A	P	V	Y	Q	R	I	A	G	H	Q	W	R	H	I	W	L	S	G	D	I	H	G	C	L	E	Q	L	R	R	K	L	W	H	C	R	F	D	P	W	R	D	L	L	I	S	V	G	D	V	I	D	R	G	P	Q
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		S	L	R	C	L	Q	L	L	E	Q	H	W	V	C	A	V	R	G	N	H	E	Q	M	A	M	D	A	L	A	S	Q	Q	M	S	L	W	L	M	N	G	G	D	W	F	I	A	L	A	D	N	Q	Q	K	Q	A	K	T	A	L	E
Secondary structure
SS confidence
Disorder																																		?																?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		K	C	Q	H	L	P	F	I	L	E	V	H	S	R	T	G	K	H	V	I	A	H	A	D	Y	P	D	D	V	Y	E	W	Q	K	D	V	D	L	H	Q	V	L	W	S	R	S	R	L	G	E	R	Q	K	G	Q	G	I	T	G	A
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Sequence		D	H	F	W	F	G	H	T	P	L	R	H	R	V	D	I	G	N	L	H	Y	I	D	T	G	A	V	F	G	G	E	L	T	L	V	Q	L	Q
Secondary structure
SS confidence
Disorder																																							?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1g5b chain A Region: 8 - 218 Aligned: 211 Modelled: 211 Confidence: 100.0% Identity: 48% Fold: Metallo-dependent phosphatases Superfamily: Metallo-dependent phosphatases Family: Protein serine/threonine phosphatase Phyre2 PDB 2qjc chain A Region: 8 - 218 Aligned: 192 Modelled: 197 Confidence: 100.0% Identity: 22% PDB header:hydrolase Chain: A: PDB Molecule:diadenosine tetraphosphatase, putative; PDBTitle: crystal structure of a putative diadenosine tetraphosphatase Phyre2 PDB 2dfj chain A Region: 19 - 218 Aligned: 192 Modelled: 200 Confidence: 100.0% Identity: 28% PDB header:hydrolase Chain: A: PDB Molecule:diadenosinetetraphosphatase; PDBTitle: crystal structure of the diadenosine tetraphosphate2 hydrolase from shigella flexneri 2a Phyre2 PDB 2zbm chain A Region: 1 - 218 Aligned: 213 Modelled: 218 Confidence: 100.0% Identity: 17% PDB header:hydrolase Chain: A: PDB Molecule:protein-tyrosine-phosphatase; PDBTitle: crystal structure of i115m mutant cold-active protein2 tyrosine phosphatase Phyre2 PDB 1jk7 chain A Region: 5 - 218 Aligned: 195 Modelled: 203 Confidence: 100.0% Identity: 24% Fold: Metallo-dependent phosphatases Superfamily: Metallo-dependent phosphatases Family: Protein serine/threonine phosphatase Phyre2 PDB 3c5w chain C domain 1 Region: 2 - 218 Aligned: 199 Modelled: 217 Confidence: 100.0% Identity: 20% Fold: Metallo-dependent phosphatases Superfamily: Metallo-dependent phosphatases Family: Protein serine/threonine phosphatase Phyre2 PDB 1s95 chain A Region: 2 - 196 Aligned: 181 Modelled: 195 Confidence: 100.0% Identity: 20% Fold: Metallo-dependent phosphatases Superfamily: Metallo-dependent phosphatases Family: Protein serine/threonine phosphatase Phyre2 PDB 1s70 chain A Region: 2 - 218 Aligned: 198 Modelled: 206 Confidence: 100.0% Identity: 24% Fold: Metallo-dependent phosphatases Superfamily: Metallo-dependent phosphatases Family: Protein serine/threonine phosphatase Phyre2 PDB 2jog chain A Region: 1 - 217 Aligned: 198 Modelled: 206 Confidence: 100.0% Identity: 17% PDB header:hydrolase Chain: A: PDB Molecule:calmodulin-dependent calcineurin a subunit alpha PDBTitle: structure of the calcineurin-nfat complex Phyre2 PDB 3icf chain B Region: 2 - 196 Aligned: 181 Modelled: 194 Confidence: 100.0% Identity: 18% PDB header:hydrolase Chain: B: PDB Molecule:serine/threonine-protein phosphatase t; PDBTitle: structure of protein serine/threonine phosphatase from saccharomyces2 cerevisiae with similarity to human phosphatase pp5 Phyre2 PDB 1aui chain A Region: 1 - 218 Aligned: 199 Modelled: 207 Confidence: 100.0% Identity: 17% Fold: Metallo-dependent phosphatases Superfamily: Metallo-dependent phosphatases Family: Protein serine/threonine phosphatase Phyre2 PDB 1aui chain A Region: 1 - 218 Aligned: 199 Modelled: 207 Confidence: 100.0% Identity: 17% PDB header:hydrolase Chain: A: PDB Molecule:serine/threonine phosphatase 2b; PDBTitle: human calcineurin heterodimer Phyre2 PDB 1nnw chain A Region: 18 - 217 Aligned: 192 Modelled: 200 Confidence: 99.9% Identity: 11% Fold: Metallo-dependent phosphatases Superfamily: Metallo-dependent phosphatases Family: Phosphoesterase-related Phyre2 PDB 1wao chain 4 Region: 1 - 210 Aligned: 196 Modelled: 199 Confidence: 99.9% Identity: 19% PDB header:hydrolase Chain: 4: PDB Molecule:serine/threonine protein phosphatase 5; PDBTitle: pp5 structure Phyre2 PDB 2p6b chain C Region: 5 - 198 Aligned: 175 Modelled: 183 Confidence: 99.9% Identity: 19% PDB header:hydrolase/hydrolase regulator Chain: C: PDB Molecule:calmodulin-dependent calcineurin a subunit alpha PDBTitle: crystal structure of human calcineurin in complex with2 pvivit peptide Phyre2 PDB 2p6b chain A domain 1 Region: 5 - 198 Aligned: 175 Modelled: 183 Confidence: 99.9% Identity: 19% Fold: Metallo-dependent phosphatases Superfamily: Metallo-dependent phosphatases Family: Protein serine/threonine phosphatase Phyre2 PDB 3rqz chain C Region: 18 - 207 Aligned: 165 Modelled: 190 Confidence: 99.9% Identity: 21% PDB header:hydrolase Chain: C: PDB Molecule:metallophosphoesterase; PDBTitle: crystal structure of metallophosphoesterase from sphaerobacter2 thermophilus Phyre2 PDB 1uf3 chain A Region: 15 - 218 Aligned: 186 Modelled: 190 Confidence: 99.9% Identity: 16% Fold: Metallo-dependent phosphatases Superfamily: Metallo-dependent phosphatases Family: TT1561-like Phyre2 PDB 3qfn chain A Region: 18 - 207 Aligned: 179 Modelled: 181 Confidence: 99.9% Identity: 18% PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of streptococcal asymmetric ap4a hydrolase and2 phosphodiesterase spr1479/saph in complex with inorganic phosphate Phyre2 PDB 1su1 chain A Region: 18 - 218 Aligned: 146 Modelled: 147 Confidence: 99.9% Identity: 25% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein yfce; PDBTitle: structural and biochemical characterization of yfce, a2 phosphoesterase from e. coli Phyre2 1 d1g5ba_ 2 c2qjcA_ 3 c2dfjA_ 4 c2zbmA_ 5 d1jk7a_ 6 d3c5wc1 7 d1s95a_ 8 d1s70a_ 9 c2jogA_ 10 c3icfB_ 11 d1auia_ 12 c1auiA_ 13 d1nnwa_ 14 c1wao4_ 15 c2p6bC_ 16 d2p6ba1 17 c3rqzC_ 18 d1uf3a_ 19 c3qfnA_ 20 c1su1A_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1g5ba_ 100.0 48 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Protein serine/threonine phosphatase 2 c2qjcA_ 100.0 22 PDB header:hydrolase Chain: A: PDB Molecule:diadenosine tetraphosphatase, putative; PDBTitle: crystal structure of a putative diadenosine tetraphosphatase 3 c2dfjA_ 100.0 28 PDB header:hydrolase Chain: A: PDB Molecule:diadenosinetetraphosphatase; PDBTitle: crystal structure of the diadenosine tetraphosphate2 hydrolase from shigella flexneri 2a 4 c2zbmA_ 100.0 17 PDB header:hydrolase Chain: A: PDB Molecule:protein-tyrosine-phosphatase; PDBTitle: crystal structure of i115m mutant cold-active protein2 tyrosine phosphatase 5 d1jk7a_ 100.0 24 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Protein serine/threonine phosphatase 6 d3c5wc1 100.0 20 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Protein serine/threonine phosphatase 7 d1s95a_ 100.0 20 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Protein serine/threonine phosphatase 8 d1s70a_ 100.0 24 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Protein serine/threonine phosphatase 9 c2jogA_ 100.0 17 PDB header:hydrolase Chain: A: PDB Molecule:calmodulin-dependent calcineurin a subunit alpha PDBTitle: structure of the calcineurin-nfat complex 10 c3icfB_ 100.0 18 PDB header:hydrolase Chain: B: PDB Molecule:serine/threonine-protein phosphatase t; PDBTitle: structure of protein serine/threonine phosphatase from saccharomyces2 cerevisiae with similarity to human phosphatase pp5 11 d1auia_ 100.0 17 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Protein serine/threonine phosphatase 12 c1auiA_ 100.0 17 PDB header:hydrolase Chain: A: PDB Molecule:serine/threonine phosphatase 2b; PDBTitle: human calcineurin heterodimer 13 d1nnwa_ 99.9 11 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Phosphoesterase-related 14 c1wao4_ 99.9 19 PDB header:hydrolase Chain: 4: PDB Molecule:serine/threonine protein phosphatase 5; PDBTitle: pp5 structure 15 c2p6bC_ 99.9 19 PDB header:hydrolase/hydrolase regulator Chain: C: PDB Molecule:calmodulin-dependent calcineurin a subunit alpha PDBTitle: crystal structure of human calcineurin in complex with2 pvivit peptide 16 d2p6ba1 99.9 19 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Protein serine/threonine phosphatase 17 c3rqzC_ 99.9 21 PDB header:hydrolase Chain: C: PDB Molecule:metallophosphoesterase; PDBTitle: crystal structure of metallophosphoesterase from sphaerobacter2 thermophilus 18 d1uf3a_ 99.9 16 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:TT1561-like 19 c3qfnA_ 99.9 18 PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of streptococcal asymmetric ap4a hydrolase and2 phosphodiesterase spr1479/saph in complex with inorganic phosphate 20 c1su1A_ 99.9 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein yfce; PDBTitle: structural and biochemical characterization of yfce, a2 phosphoesterase from e. coli 21 d1su1a_ not modelled 99.9 25 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:YfcE-like 22 d3ck2a1 not modelled 99.9 20 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:YfcE-like 23 c2kknA_ not modelled 99.8 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of themotoga maritima protein tm1076:2 northeast structural genomics consortium target vt57 24 d2a22a1 not modelled 99.8 19 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:YfcE-like 25 c1s3mA_ not modelled 99.8 21 PDB header:phosphodiesterase Chain: A: PDB Molecule:hypothetical protein mj0936; PDBTitle: structural and functional characterization of a novel2 archaeal phosphodiesterase 26 d1s3la_ not modelled 99.8 21 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:YfcE-like 27 d2yvta1 not modelled 99.8 14 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:TT1561-like 28 d1z2wa1 not modelled 99.7 22 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:YfcE-like 29 d1xm7a_ not modelled 99.5 14 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Hypothetical protein aq 1666 30 c3av0A_ not modelled 99.5 15 PDB header:recombination Chain: A: PDB Molecule:dna double-strand break repair protein mre11; PDBTitle: crystal structure of mre11-rad50 bound to atp s 31 c3auzA_ not modelled 99.4 15 PDB header:recombination Chain: A: PDB Molecule:dna double-strand break repair protein mre11; PDBTitle: crystal structure of mre11 with manganese 32 d1ii7a_ not modelled 99.4 19 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:DNA double-strand break repair nuclease 33 c3rl4A_ not modelled 99.4 17 PDB header:hydrolase Chain: A: PDB Molecule:metallophosphoesterase mpped2; PDBTitle: rat metallophosphodiesterase mpped2 g252h mutant 34 c3ib7A_ not modelled 99.4 15 PDB header:hydrolase Chain: A: PDB Molecule:icc protein; PDBTitle: crystal structure of full length rv0805 35 d2hy1a1 not modelled 99.3 16 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:GpdQ-like 36 c2hy1A_ not modelled 99.3 16 PDB header:hydrolase Chain: A: PDB Molecule:rv0805; PDBTitle: crystal structure of rv0805 37 d3d03a1 not modelled 99.2 10 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:GpdQ-like 38 c2xmoB_ not modelled 99.1 17 PDB header:hydrolase Chain: B: PDB Molecule:lmo2642 protein; PDBTitle: the crystal structure of lmo2642 39 c2q8uA_ not modelled 99.0 16 PDB header:hydrolase Chain: A: PDB Molecule:exonuclease, putative; PDBTitle: crystal structure of mre11 from thermotoga maritima msb8 (tm1635) at2 2.20 a resolution 40 d2nxfa1 not modelled 99.0 16 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:ADPRibase-Mn-like 41 c1oidA_ not modelled 98.8 12 PDB header:hydrolase Chain: A: PDB Molecule:protein usha; PDBTitle: 5'-nucleotidase (e. coli) with an engineered disulfide2 bridge (s228c, p513c) 42 c3qfkA_ not modelled 98.8 17 PDB header:hydrolase Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: 2.05 angstrom crystal structure of putative 5'-nucleotidase from2 staphylococcus aureus in complex with alpha-ketoglutarate 43 d1xzwa2 not modelled 98.8 15 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Purple acid phosphatase-like 44 c3ivdA_ not modelled 98.7 15 PDB header:hydrolase Chain: A: PDB Molecule:nucleotidase; PDBTitle: putative 5'-nucleotidase (c4898) from escherichia coli in2 complex with uridine 45 d2qfra2 not modelled 98.7 12 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Purple acid phosphatase-like 46 d1usha2 not modelled 98.6 16 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain 47 c3qg5D_ not modelled 98.6 27 PDB header:hydrolase Chain: D: PDB Molecule:mre11; PDBTitle: the mre11:rad50 complex forms an atp dependent molecular clamp in dna2 double-strand break repair 48 d1qhwa_ not modelled 98.5 15 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Purple acid phosphatase-like 49 c1qhwA_ not modelled 98.5 15 PDB header:hydrolase Chain: A: PDB Molecule:protein (purple acid phosphatase); PDBTitle: purple acid phosphatase from rat bone 50 c2z1aA_ not modelled 98.5 19 PDB header:hydrolase Chain: A: PDB Molecule:5'-nucleotidase; PDBTitle: crystal structure of 5'-nucleotidase precursor from thermus2 thermophilus hb8 51 d1utea_ not modelled 98.4 17 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Purple acid phosphatase-like 52 d2z1aa2 not modelled 98.4 16 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain 53 c3jyfB_ not modelled 98.3 21 PDB header:hydrolase Chain: B: PDB Molecule:2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- PDBTitle: the crystal structure of a 2,3-cyclic nucleotide 2-2 phosphodiesterase/3-nucleotidase bifunctional periplasmic precursor3 protein from klebsiella pneumoniae subsp. pneumoniae mgh 78578 54 c3t1iC_ not modelled 98.3 30 PDB header:hydrolase Chain: C: PDB Molecule:double-strand break repair protein mre11a; PDBTitle: crystal structure of human mre11: understanding tumorigenic mutations 55 c3gveB_ not modelled 98.3 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:yfkn protein; PDBTitle: crystal structure of calcineurin-like phosphoesterase yfkn from2 bacillus subtilis 56 c3zu0A_ not modelled 98.2 17 PDB header:hydrolase Chain: A: PDB Molecule:nad nucleotidase; PDBTitle: structure of haemophilus influenzae nad nucleotidase (nadn) 57 c2wdfA_ not modelled 98.1 15 PDB header:hydrolase Chain: A: PDB Molecule:sulfur oxidation protein soxb; PDBTitle: termus thermophilus sulfate thiohydrolase soxb 58 d3c9fa2 not modelled 97.0 23 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain 59 c1xzwB_ not modelled 96.7 19 PDB header:hydrolase Chain: B: PDB Molecule:purple acid phosphatase; PDBTitle: sweet potato purple acid phosphatase/phosphate complex 60 c1kbpB_ not modelled 96.6 17 PDB header:hydrolase (phosphoric monoester) Chain: B: PDB Molecule:purple acid phosphatase; PDBTitle: kidney bean purple acid phosphatase 61 c3c9fB_ not modelled 96.2 23 PDB header:hydrolase Chain: B: PDB Molecule:5'-nucleotidase; PDBTitle: crystal structure of 5'-nucleotidase from candida albicans sc5314 62 d2z06a1 not modelled 95.6 31 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:TTHA0625-like 63 c3e0jG_ not modelled 95.2 15 PDB header:transferase Chain: G: PDB Molecule:dna polymerase subunit delta-2; PDBTitle: x-ray structure of the complex of regulatory subunits of2 human dna polymerase delta 64 d1t71a_ not modelled 95.1 22 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:DR1281-like 65 d1t70a_ not modelled 95.0 21 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:DR1281-like 66 c3floG_ not modelled 91.7 20 PDB header:transferase Chain: G: PDB Molecule:dna polymerase alpha subunit b; PDBTitle: crystal structure of the carboxyl-terminal domain of yeast2 dna polymerase alpha in complex with its b subunit 67 d1gg4a1 not modelled 63.8 15 Fold:MurD-like peptide ligases, peptide-binding domain Superfamily:MurD-like peptide ligases, peptide-binding domain Family:MurCDEF C-terminal domain 68 c3nh8A_ not modelled 47.0 18 PDB header:hydrolase Chain: A: PDB Molecule:aspartoacylase-2; PDBTitle: crystal structure of murine aminoacylase 3 in complex with n-acetyl-s-2 1,2-dichlorovinyl-l-cysteine 69 d1ylea1 not modelled 35.0 29 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:AstA-like 70 c2issF_ not modelled 29.4 21 PDB header:lyase, transferase Chain: F: PDB Molecule:glutamine amidotransferase subunit pdxt; PDBTitle: structure of the plp synthase holoenzyme from thermotoga maritima 71 c2qj8B_ not modelled 23.3 16 PDB header:hydrolase Chain: B: PDB Molecule:mlr6093 protein; PDBTitle: crystal structure of an aspartoacylase family protein (mlr6093) from2 mesorhizobium loti maff303099 at 2.00 a resolution 72 c1z9bA_ not modelled 22.6 19 PDB header:translation Chain: A: PDB Molecule:translation initiation factor if-2; PDBTitle: solution structure of the c1-subdomain of bacillus2 stearothermophilus translation initiation factor if2 73 c3cdxB_ not modelled 19.9 14 PDB header:hydrolase Chain: B: PDB Molecule:succinylglutamatedesuccinylase/aspartoacylase; PDBTitle: crystal structure of2 succinylglutamatedesuccinylase/aspartoacylase from3 rhodobacter sphaeroides 74 c3na6A_ not modelled 19.0 23 PDB header:hydrolase Chain: A: PDB Molecule:succinylglutamate desuccinylase/aspartoacylase; PDBTitle: crystal structure of a succinylglutamate desuccinylase (tm1040_2694)2 from silicibacter sp. tm1040 at 2.00 a resolution 75 c2dlcX_ not modelled 17.8 13 PDB header:ligase/trna Chain: X: PDB Molecule:tyrosyl-trna synthetase, cytoplasmic; PDBTitle: crystal structure of the ternary complex of yeast tyrosyl-trna2 synthetase 76 d3beda1 not modelled 15.2 11 Fold:PTS system fructose IIA component-like Superfamily:PTS system fructose IIA component-like Family:EIIA-man component-like 77 c3n9iA_ not modelled 14.6 20 PDB header:ligase Chain: A: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl-trna synthetase from yersinia pestis2 co92 78 c3prhB_ not modelled 13.9 10 PDB header:ligase Chain: B: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: tryptophanyl-trna synthetase val144pro mutant from b. subtilis 79 d1q7ra_ not modelled 13.3 21 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT) 80 c2el7A_ not modelled 13.0 22 PDB header:ligase Chain: A: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl-trna synthetase from thermus2 thermophilus 81 c2cybA_ not modelled 12.9 17 PDB header:ligase Chain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: crystal structure of tyrosyl-trna synthetase complexed with2 l-tyrosine from archaeoglobus fulgidus 82 d1j1ua_ not modelled 12.2 27 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Nucleotidylyl transferase Family:Class I aminoacyl-tRNA synthetases (RS), catalytic domain 83 d1i6la_ not modelled 12.1 17 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Nucleotidylyl transferase Family:Class I aminoacyl-tRNA synthetases (RS), catalytic domain 84 d1otha2 not modelled 12.0 12 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 85 c3hp7A_ not modelled 10.5 43 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hemolysin, putative; PDBTitle: putative hemolysin from streptococcus thermophilus. 86 d1ux6a1 not modelled 10.1 33 Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:Thrombospondin C-terminal domain 87 c2vdwA_ not modelled 10.0 13 PDB header:transferase Chain: A: PDB Molecule:vaccinia virus capping enzyme d1 subunit; PDBTitle: guanosine n7 methyl-transferase sub-complex (d1-d12) of the2 vaccinia virus mrna capping enzyme 88 d2at2a2 not modelled 9.3 27 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 89 d2z1ca1 not modelled 8.6 40 Fold:OB-fold Superfamily:HupF/HypC-like Family:HupF/HypC-like 90 c3ujcA_ not modelled 8.5 36 PDB header:transferase Chain: A: PDB Molecule:phosphoethanolamine n-methyltransferase; PDBTitle: phosphoethanolamine methyltransferase mutant (h132a) from plasmodium2 falciparum in complex with phosphocholine 91 d2o57a1 not modelled 8.4 36 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Mycolic acid cyclopropane synthase 92 d3d3ra1 not modelled 7.8 30 Fold:OB-fold Superfamily:HupF/HypC-like Family:HupF/HypC-like 93 c1gg4A_ not modelled 7.8 14 PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramoylalanyl-d-glutamyl-2,6- PDBTitle: crystal structure of escherichia coli udpmurnac-tripeptide2 d-alanyl-d-alanine-adding enzyme (murf) at 2.3 angstrom3 resolution 94 c3fmcC_ not modelled 7.6 11 PDB header:hydrolase Chain: C: PDB Molecule:putative succinylglutamate desuccinylase / aspartoacylase; PDBTitle: crystal structure of a putative succinylglutamate desuccinylase /2 aspartoacylase family protein (sama_0604) from shewanella amazonensis3 sb2b at 1.80 a resolution 95 d1dxha2 not modelled 7.5 12 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 96 c3d3rA_ not modelled 7.4 30 PDB header:chaperone Chain: A: PDB Molecule:hydrogenase assembly chaperone hypc/hupf; PDBTitle: crystal structure of the hydrogenase assembly chaperone hypc/hupf2 family protein from shewanella oneidensis mr-1 97 d2i3ca1 not modelled 7.2 16 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:AstE/AspA-like 98 c3m5wB_ not modelled 7.0 13 PDB header:ligase Chain: B: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl-trna synthetase from2 campylobacter jejuni 99 d2ot2a1 not modelled 7.0 30 Fold:OB-fold Superfamily:HupF/HypC-like Family:HupF/HypC-like

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0