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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3floG_

Fold library idPDB HeaderMoleculeTitle
c3floG_PDB header: transferaseChain: G: PDB Molecule: dna polymerase alpha subunit b;PDBTitle: crystal structure of the carboxyl-terminal domain of yeast2 dna polymerase alpha in complex with its b subunit


Added to library: Sat Aug 28 19:55:36 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RTMRQNLQEASDVLDDQIESFTKIIQNHYKLSPNDFADPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLS
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Known secondary structure (DSSP)

S


TT

GGGB

TTS

SS
SSSS

S


TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LETSRMGGVGRRVRLDLSQVNELSFFLGQIVAFKGKNANGDYFTVNSILPLPYPNSPVSTSQELQEFQAN
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Known secondary structure (DSSP)

TT

TT

S
TT

SSSS










 .........150.........160.........170.........180.........190.........200.........210
Sequence LEGSSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQ
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Known secondary structure (DSSP) TSS
S

S
TT



TT

SS
SSBTTST




TT
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PKTLDELFLKLFTPILKTISPHIQTVLIPSTKDAISNHAAYPQASLIRKALQLPKRNFKCMANPSSFQIN
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Known secondary structure (DSSP)
SSTTTS
TTS

TTBTT
S

SBSB



T

TTT

BST
 .........290.........300.........310.........320.........330.........340.........350
Sequence EIYFGCSNVDTFKDLKEVIKGGTTSSRYRLDRVSEHILQQRRYYPIFPGSIRTHISGADLDVSYLGLTEF
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Known secondary structure (DSSP) T

S




S
TBS


SS






B
GGGGGGGB
 .........360.........370.........380.........390.........400.........410.........420
Sequence VGGFSPDIMIIPSELQHFARVVQNVVVINPGRFIRATGNRGSYAQITVQCPDLEDGKLTLVEGEEPVYLH
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Known secondary structure (DSSP) GGG


S


SS

TT


SB
TTS
B




SSSS
S
SSS

 .........430...
Sequence NVWKRARVDLIAS
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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