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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1gg4A_

Fold library idPDB HeaderMoleculeTitle
c1gg4A_PDB header: ligaseChain: A: PDB Molecule: udp-n-acetylmuramoylalanyl-d-glutamyl-2,6-PDBTitle: crystal structure of escherichia coli udpmurnac-tripeptide2 d-alanyl-d-alanine-adding enzyme (murf) at 2.3 angstrom3 resolution


Added to library: Tue Mar 16 12:15:00 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XISVTLSQLTDILNGELQGADITLDAVTTDTRKLTPGCLFVALKGERFDAHDFADQAKAGGAGALLVSRP
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Known secondary structure (DSSP)


TTS


S
S
GGG

TT


B
SS
BTTTTTT

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LDIDLPQLIVKDTRLAFGELAAWVRQQVPARVVALTGSSGKTSVKEXTAAILSQCGNTLYTAGNLNNDIG
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Known secondary structure (DSSP)
S
SS
S
S


SS
TTTS


TT

STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VPXTLLRLTPEYDYAVIELGANHQGEIAWTVSLTRPEAALVNNLASLAGVAKAKGEIFSGLPENGIAIXN
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Known secondary structure (DSSP) TT

TT
S


SSSS

S




GGGGG

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ADNNDWLNWQSVIGSRKVWRFSPNAANSDFTATNIHVTSHGTEFTLQTPTGSVDVLLPLPGRHNIANALA
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Known secondary structure (DSSP) TTB

TTS
SS
TT
SB
SSSTT
SSST
 .........290.........300.........310.........320.........330.........340.........350
Sequence AAALSXSVGATLDAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYNANVGSXTAAVQVLAEXPGYRVLVV
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Known secondary structure (DSSP) TT

TT



TTSSTT

S


SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence GDXAELGAESEACHVQVGEAAKAAGIDRVLSVGKQSHAISTASGVGEHFADKTALITRLKLLIAEQQVIT
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Known secondary structure (DSSP)





TTT
SSSSTTTS
SS
SS
 .........430.........
Sequence ILVKGSRSAAXEEVVRALQ
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Known secondary structure (DSSP)

GGGTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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