Email l.a.kelley@imperial.ac.uk Description P0AFU8 Date Thu Jan 5 11:27:19 GMT 2012 Unique Job ID 2d5ea66f0091f510

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1i8dB_ 100.0 100 PDB header:transferase Chain: B: PDB Molecule:riboflavin synthase; PDBTitle: crystal structure of riboflavin synthase 2 c1kzlA_ 100.0 35 PDB header:transferase Chain: A: PDB Molecule:riboflavin synthase; PDBTitle: riboflavin synthase from s.pombe bound to2 carboxyethyllumazine 3 c3a35B_ 100.0 31 PDB header:luminescent protein Chain: B: PDB Molecule:lumazine protein; PDBTitle: crystal structure of lump complexed with riboflavin 4 c3ddyA_ 100.0 32 PDB header:luminescent protein Chain: A: PDB Molecule:lumazine protein; PDBTitle: structure of lumazine protein, an optical transponder of luminescent2 bacteria 5 d1i8da2 100.0 100 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Riboflavin synthase 6 d1kzla2 100.0 33 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Riboflavin synthase 7 c1hzeB_ 100.0 100 PDB header:transferase Chain: B: PDB Molecule:riboflavin synthase alpha chain; PDBTitle: solution structure of the n-terminal domain of riboflavin synthase2 from e. coli 8 c1i18B_ 100.0 100 PDB header:transferase Chain: B: PDB Molecule:riboflavin synthase alpha chain; PDBTitle: solution structure of the n-terminal domain of riboflavin synthase2 from e. coli 9 d1i8da1 100.0 100 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Riboflavin synthase 10 c1pkvA_ 100.0 100 PDB header:transferase Chain: A: PDB Molecule:riboflavin synthase alpha chain; PDBTitle: the n-terminal domain of riboflavin synthase in complex with2 riboflavin 11 c1pkvB_ 100.0 100 PDB header:transferase Chain: B: PDB Molecule:riboflavin synthase alpha chain; PDBTitle: the n-terminal domain of riboflavin synthase in complex with2 riboflavin 12 d1kzla1 100.0 38 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Riboflavin synthase 13 d2g50a1 68.8 16 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 14 c3nrfA_ 64.0 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:apag protein; PDBTitle: crystal structure of an apag protein (pa1934) from pseudomonas2 aeruginosa pao1 at 1.50 a resolution 15 d1pkla1 48.6 11 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 16 d1e0ta1 46.2 31 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 17 d1liua1 43.7 22 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 18 d1a3xa1 34.7 15 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 19 c3o44G_ 33.8 36 PDB header:toxin Chain: G: PDB Molecule:hemolysin; PDBTitle: crystal structure of the vibrio cholerae cytolysin (hlya) heptameric2 pore 20 d2hx0a1 30.6 17 Fold:AF0104/ALDC/Ptd012-like Superfamily:AF0104/ALDC/Ptd012-like Family:AF0104-like 21 d1pkma1 not modelled 29.2 20 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 22 c1xezA_ not modelled 28.2 36 PDB header:toxin Chain: A: PDB Molecule:hemolysin; PDBTitle: crystal structure of the vibrio cholerae cytolysin (hlya)2 pro-toxin with octylglucoside bound 23 c1hn0A_ not modelled 27.4 14 PDB header:lyase Chain: A: PDB Molecule:chondroitin abc lyase i; PDBTitle: crystal structure of chondroitin abc lyase i from proteus2 vulgaris at 1.9 angstroms resolution 24 d1zbfa1 not modelled 26.8 10 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Ribonuclease H 25 d3bzka4 not modelled 25.2 16 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 26 d1hn0a3 not modelled 23.5 11 Fold:Hyaluronate lyase-like, C-terminal domain Superfamily:Hyaluronate lyase-like, C-terminal domain Family:Hyaluronate lyase-like, C-terminal domain 27 c1v0eB_ not modelled 20.2 26 PDB header:hydrolase Chain: B: PDB Molecule:endo-alpha-sialidase; PDBTitle: endosialidase of bacteriophage k1f 28 d1zrua1 not modelled 17.9 24 Fold:Virus attachment protein globular domain Superfamily:Virus attachment protein globular domain Family:Lactophage receptor-binding protein head domain 29 c2izpB_ not modelled 16.9 25 PDB header:toxin Chain: B: PDB Molecule:putative membrane antigen; PDBTitle: bipd - an invasion prtein associated with the type-iii2 secretion system of burkholderia pseudomallei. 30 d2izpa1 not modelled 15.4 25 Fold:IpaD-like Superfamily:IpaD-like Family:IpaD-like 31 d1vqoq1 not modelled 15.2 24 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:Ribosomal proteins L24p and L21e 32 c3da0C_ not modelled 13.8 24 PDB header:viral protein Chain: C: PDB Molecule:cleaved chimeric receptor binding protein from PDBTitle: crystal structure of a cleaved form of a chimeric receptor binding2 protein from lactococcal phages subspecies tp901-1 and p2 33 c2khiA_ not modelled 13.7 10 PDB header:ribosomal protein Chain: A: PDB Molecule:30s ribosomal protein s1; PDBTitle: nmr structure of the domain 4 of the e. coli ribosomal2 protein s1 34 c3h43F_ not modelled 13.2 20 PDB header:hydrolase Chain: F: PDB Molecule:proteasome-activating nucleotidase; PDBTitle: n-terminal domain of the proteasome-activating nucleotidase2 of methanocaldococcus jannaschii 35 c2zkrq_ not modelled 12.8 29 PDB header:ribosomal protein/rna Chain: Q: PDB Molecule:rna expansion segment es31 part ii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 36 d1qfja1 not modelled 12.8 7 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 37 d1xpna_ not modelled 12.7 25 Fold:Prealbumin-like Superfamily:Hypothetical protein PA1324 Family:Hypothetical protein PA1324 38 c2jz2A_ not modelled 12.4 44 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ssl0352 protein; PDBTitle: solution nmr structure of ssl0352 protein from synechocystis sp. pcc2 6803. northeast structural genomics consortium target sgr42 39 d1xsza2 not modelled 11.9 25 Fold:TBP-like Superfamily:RalF, C-terminal domain Family:RalF, C-terminal domain 40 d1yq2a3 not modelled 11.6 21 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:beta-Galactosidase/glucuronidase, N-terminal domain 41 c3kf8D_ not modelled 11.4 27 PDB header:structural protein Chain: D: PDB Molecule:protein ten1; PDBTitle: crystal structure of c. tropicalis stn1-ten1 complex 42 c1s1iQ_ not modelled 11.2 35 PDB header:ribosome Chain: Q: PDB Molecule:60s ribosomal protein l21-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. 43 c2dycA_ not modelled 11.1 20 PDB header:sugar binding protein Chain: A: PDB Molecule:galectin-4; PDBTitle: crystal structure of the n-terminal domain of mouse galectin-4 44 d1ulea_ not modelled 10.9 12 Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:Galectin (animal S-lectin) 45 d2f0ca1 not modelled 10.6 20 Fold:Virus attachment protein globular domain Superfamily:Virus attachment protein globular domain Family:Lactophage receptor-binding protein head domain 46 c3d8mA_ not modelled 10.4 24 PDB header:virus/viral protein Chain: A: PDB Molecule:baseplate protein, receptor binding protein; PDBTitle: crystal structure of a chimeric receptor binding protein from2 lactococcal phages subspecies tp901-1 and p2 47 d1s04a_ not modelled 10.2 22 Fold:PUA domain-like Superfamily:PUA domain-like Family:ProFAR isomerase associated domain 48 c3iz5U_ not modelled 9.4 29 PDB header:ribosome Chain: U: PDB Molecule:60s ribosomal protein l21 (l21e); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 49 d1r9fa_ not modelled 9.4 36 Fold:Tombusvirus P19 core protein, VP19 Superfamily:Tombusvirus P19 core protein, VP19 Family:Tombusvirus P19 core protein, VP19 50 c2p6yA_ not modelled 9.3 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein vca0587; PDBTitle: x-ray structure of the protein q9km02_vibch from vibrio cholerae at2 the resolution 1.63 a. northeast structural genomics consortium3 target vcr80. 51 c2r7fA_ not modelled 9.3 5 PDB header:hydrolase Chain: A: PDB Molecule:ribonuclease ii family protein; PDBTitle: crystal structure of ribonuclease ii family protein from deinococcus2 radiodurans, hexagonal crystal form. northeast structural genomics3 target drr63 52 c3izcU_ not modelled 9.2 35 PDB header:ribosome Chain: U: PDB Molecule:60s ribosomal protein rpl21 (l21e); PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome 53 c4a1aP_ not modelled 9.0 35 PDB header:ribosome Chain: P: PDB Molecule:60s ribosomal protein l21; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 3. 54 d1cb8a2 not modelled 8.8 13 Fold:Hyaluronate lyase-like, C-terminal domain Superfamily:Hyaluronate lyase-like, C-terminal domain Family:Hyaluronate lyase-like, C-terminal domain 55 d1fnda1 not modelled 8.7 17 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 56 c2wg6L_ not modelled 8.1 22 PDB header:transcription,hydrolase Chain: L: PDB Molecule:general control protein gcn4, PDBTitle: proteasome-activating nucleotidase (pan) n-domain (57-134)2 from archaeoglobus fulgidus fused to gcn4, p61a mutant 57 c3htnA_ not modelled 7.9 17 PDB header:metal binding protein Chain: A: PDB Molecule:putative dna binding protein; PDBTitle: crystal structure of a putative dna binding protein (bt_1116) from2 bacteroides thetaiotaomicron vpi-5482 at 1.50 a resolution 58 d1krha1 not modelled 7.8 16 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 59 c2z14A_ not modelled 7.7 13 PDB header:signaling protein Chain: A: PDB Molecule:ef-hand domain-containing family member c2; PDBTitle: crystal structure of the n-terminal duf1126 in human ef-2 hand domain containing 2 protein 60 d1gawa1 not modelled 7.6 17 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 61 c3ca9A_ not modelled 7.5 21 PDB header:hydrolase Chain: A: PDB Molecule:deoxyuridine triphosphatase; PDBTitle: evolution of chlorella virus dutpase 62 d2plia1 not modelled 7.5 21 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 63 d2c9aa2 not modelled 7.4 23 Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:MAM domain 64 d2oaia1 not modelled 7.0 13 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 65 d1pk6a_ not modelled 6.9 17 Fold:TNF-like Superfamily:TNF-like Family:TNF-like 66 c1aqfB_ not modelled 6.9 17 PDB header:transferase Chain: B: PDB Molecule:pyruvate kinase; PDBTitle: pyruvate kinase from rabbit muscle with mg, k, and l-2 phospholactate 67 d2p13a1 not modelled 6.7 14 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 68 c3ftjA_ not modelled 6.7 11 PDB header:hydrolase Chain: A: PDB Molecule:macrolide export atp-binding/permease protein PDBTitle: crystal structure of the periplasmic region of macb from2 actinobacillus actinomycetemcomitans 69 c3m9bK_ not modelled 6.7 25 PDB header:chaperone Chain: K: PDB Molecule:proteasome-associated atpase; PDBTitle: crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa 70 d1k8kg_ not modelled 6.5 14 Fold:alpha-alpha superhelix Superfamily:Arp2/3 complex 16 kDa subunit ARPC5 Family:Arp2/3 complex 16 kDa subunit ARPC5 71 d1fdra1 not modelled 6.4 16 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 72 c1t5aB_ not modelled 6.3 17 PDB header:transferase Chain: B: PDB Molecule:pyruvate kinase, m2 isozyme; PDBTitle: human pyruvate kinase m2 73 c2khjA_ not modelled 6.3 13 PDB header:ribosomal protein Chain: A: PDB Molecule:30s ribosomal protein s1; PDBTitle: nmr structure of the domain 6 of the e. coli ribosomal2 protein s1 74 d1j8hd1 not modelled 6.0 27 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:V set domains (antibody variable domain-like) 75 d2plsa1 not modelled 6.0 17 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 76 c2k4vA_ not modelled 5.9 27 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein pa1076; PDBTitle: solution structure of uncharacterized protein pa1076 from2 pseudomonas aeruginosa. northeast structural genomics3 consortium (nesg) target pat3, ontario center for4 structural proteomics target pa1076 . 77 d1duna_ not modelled 5.8 13 Fold:beta-clip Superfamily:dUTPase-like Family:dUTPase-like 78 c2l0dA_ not modelled 5.8 12 PDB header:cell adhesion Chain: A: PDB Molecule:cell surface protein; PDBTitle: solution nmr structure of putative cell surface protein ma_4588 (272-2 376 domain) from methanosarcina acetivorans, northeast structural3 genomics consortium target mvr254a 79 d1qfza1 not modelled 5.6 17 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 80 c3lgjA_ not modelled 5.4 20 PDB header:dna binding protein Chain: A: PDB Molecule:single-stranded dna-binding protein; PDBTitle: crystal structure of single-stranded binding protein (ssb) from2 bartonella henselae 81 c2zzfA_ not modelled 5.3 18 PDB header:ligase Chain: A: PDB Molecule:alanyl-trna synthetase; PDBTitle: crystal structure of alanyl-trna synthetase without2 oligomerization domain 82 c2aklA_ not modelled 5.3 30 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:phna-like protein pa0128; PDBTitle: solution structure for phn-a like protein pa0128 from2 pseudomonas aeruginosa 83 d3deda1 not modelled 5.1 17 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 84 d1am2a_ not modelled 5.0 19 Fold:Hedgehog/intein (Hint) domain Superfamily:Hedgehog/intein (Hint) domain Family:Intein (protein splicing domain) 85 c2vl6C_ not modelled 5.0 27 PDB header:dna binding protein Chain: C: PDB Molecule:minichromosome maintenance protein mcm; PDBTitle: structural analysis of the sulfolobus solfataricus mcm2 protein n-terminal domain