PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2izpB_

Fold library id	PDB Header	Molecule	Title
c2izpB_	PDB header: toxin	Chain: B: PDB Molecule: putative membrane antigen;	PDBTitle: bipd - an invasion prtein associated with the type-iii2 secretion system of burkholderia pseudomallei.

Links to external resources
Added to library: Tue Mar 16 13:00:25 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D D D L R A A G V D R R V P E Q K L G A A I D E F A S L R L P D R I D G R F V D G R R A N L T V F D D A R V A V R G H A R A Q R N L L E R L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S
T T
T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E T E L L G G T L D T A G D E G G I Q P D P I L Q G L V D V I G Q G K S D I D A Y A T I V E G L T K Y F Q S V A D V M S K L Q D Y I S A K D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S T T T T T T
G G G T B
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D K N M K I D G G K I K A L I Q Q V I D H L P T M Q L P K G A D I A R W R K E L G D A V S I S D S G V V T I N P D K L I K M R D S L P P D G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T
T T
T T
S S S
T T T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . .

Sequence T V W D T A R Y Q A W N T A F S G Q K D N I Q N D V Q T L V E K Y S H Q N S N F D N L V K V L S G A I S T L T D T A K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	D	D	L	R	A	A	G	V	D	R	R	V	P	E	Q	K	L	G	A	A	I	D	E	F	A	S	L	R	L	P	D	R	I	D	G	R	F	V	D	G	R	R	A	N	L	T	V	F	D	D	A	R	V	A	V	R	G	H	A	R	A	Q	R	N	L	L	E	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		S	S	S			T																T								T	T										T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	T	E	L	L	G	G	T	L	D	T	A	G	D	E	G	G	I	Q	P	D	P	I	L	Q	G	L	V	D	V	I	G	Q	G	K	S	D	I	D	A	Y	A	T	I	V	E	G	L	T	K	Y	F	Q	S	V	A	D	V	M	S	K	L	Q	D	Y	I	S	A	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S	S	S	T	T	T	T	T	T																																										G	G	G	T	B				S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	K	N	M	K	I	D	G	G	K	I	K	A	L	I	Q	Q	V	I	D	H	L	P	T	M	Q	L	P	K	G	A	D	I	A	R	W	R	K	E	L	G	D	A	V	S	I	S	D	S	G	V	V	T	I	N	P	D	K	L	I	K	M	R	D	S	L	P	P	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																			T								T	T												T	T					S	S	S						T								T	T				T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Sequence	T	V	W	D	T	A	R	Y	Q	A	W	N	T	A	F	S	G	Q	K	D	N	I	Q	N	D	V	Q	T	L	V	E	K	Y	S	H	Q	N	S	N	F	D	N	L	V	K	V	L	S	G	A	I	S	T	L	T	D	T	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																						T	T