Email l.a.kelley@imperial.ac.uk Description P0AAB4 Date Thu Jan 5 11:12:26 GMT 2012 Unique Job ID 214ea8dd1d264932

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2idbB_ 100.0 98 PDB header:lyase Chain: B: PDB Molecule:3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PDBTitle: crystal structure of 3-octaprenyl-4-hydroxybenzoate decarboxylase2 (ubid) from escherichia coli, northeast structural genomics target3 er459. 2 d2idba1 100.0 98 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:UbiD middle domain-like 3 d2idba2 100.0 97 Fold:UbiD C-terminal domain-like Superfamily:UbiD C-terminal domain-like Family:UbiD C-terminal domain-like 4 c3bpkB_ 68.5 15 PDB header:oxidoreductase Chain: B: PDB Molecule:nitrilotriacetate monooxygenase component b; PDBTitle: crystal structure of nitrilotriacetate monooxygenase2 component b from bacillus cereus 5 c3e4vA_ 59.7 15 PDB header:flavoprotein Chain: A: PDB Molecule:nadh:fmn oxidoreductase like protein; PDBTitle: crystal structure of nadh:fmn oxidoreductase like protein in complex2 with fmn (yp_544701.1) from methylobacillus flagellatus kt at 1.40 a3 resolution 6 d1ejea_ 57.5 14 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:NADH:FMN oxidoreductase-like 7 c3ibpA_ 35.8 22 PDB header:cell cycle Chain: A: PDB Molecule:chromosome partition protein mukb; PDBTitle: the crystal structure of the dimerization domain of escherichia coli2 structural maintenance of chromosomes protein mukb 8 c3fgeA_ 17.1 7 PDB header:oxidoreductase Chain: A: PDB Molecule:putative flavin reductase with split barrel domain; PDBTitle: crystal structure of putative flavin reductase with split barrel2 domain (yp_750721.1) from shewanella frigidimarina ncimb 400 at 1.743 a resolution 9 c2k29A_ 16.8 14 PDB header:transcription Chain: A: PDB Molecule:antitoxin relb; PDBTitle: structure of the dbd domain of e. coli antitoxin relb 10 c2iu6B_ 16.6 19 PDB header:transferase Chain: B: PDB Molecule:dihydroxyacetone kinase; PDBTitle: regulation of the dha operon of lactococcus lactis 11 c2i46A_ 16.5 23 PDB header:protein binding Chain: A: PDB Molecule:adrenocortical dysplasia protein homolog; PDBTitle: crystal structure of human tpp1 12 d1j98a_ 16.4 67 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:Autoinducer-2 production protein LuxS 13 c1uv7A_ 15.8 10 PDB header:transport Chain: A: PDB Molecule:general secretion pathway protein m; PDBTitle: periplasmic domain of epsm from vibrio cholerae 14 d1uv7a_ 15.8 10 Fold:RRF/tRNA synthetase additional domain-like Superfamily:General secretion pathway protein M, EpsM Family:General secretion pathway protein M, EpsM 15 d1oi2a_ 15.7 26 Fold:DAK1/DegV-like Superfamily:DAK1/DegV-like Family:DAK1 16 c3ct4B_ 15.1 24 PDB header:transferase Chain: B: PDB Molecule:pts-dependent dihydroxyacetone kinase, PDBTitle: structure of dha-kinase subunit dhak from l. lactis 17 d1vjea_ 15.1 56 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:Autoinducer-2 production protein LuxS 18 c2pjpA_ 14.5 21 PDB header:translation/rna Chain: A: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: structure of the mrna-binding domain of elongation factor2 selb from e.coli in complex with secis rna 19 d1lvaa3 14.5 26 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:C-terminal fragment of elongation factor SelB 20 d1un8a4 14.2 19 Fold:DAK1/DegV-like Superfamily:DAK1/DegV-like Family:DAK1 21 d1h32a1 not modelled 13.1 18 Fold:Cytochrome c Superfamily:Cytochrome c Family:Di-heme cytochrome c SoxA 22 d2bj7a1 not modelled 12.5 19 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:CopG-like 23 d2ezwa1 not modelled 12.4 28 Fold:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit Superfamily:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit Family:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit 24 c1iweB_ not modelled 12.1 14 PDB header:ligase Chain: B: PDB Molecule:adenylosuccinate synthetase; PDBTitle: imp complex of the recombinant mouse-muscle2 adenylosuccinate synthetase 25 d1cf1a1 not modelled 10.7 11 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Arrestin/Vps26-like 26 c2ixaA_ not modelled 10.4 20 PDB header:hydrolase Chain: A: PDB Molecule:alpha-n-acetylgalactosaminidase; PDBTitle: a-zyme, n-acetylgalactosaminidase 27 d1iwea_ not modelled 9.5 14 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nitrogenase iron protein-like 28 c2b7fD_ not modelled 9.4 23 PDB header:hydrolase/hydrolase inhibitor Chain: D: PDB Molecule:htlv protease; PDBTitle: crystal structure of human t-cell leukemia virus protease, a novel2 target for anti-cancer design 29 c2wmmA_ not modelled 9.2 25 PDB header:cell cycle Chain: A: PDB Molecule:chromosome partition protein mukb; PDBTitle: crystal structure of the hinge domain of mukb 30 d1p9ba_ not modelled 9.2 13 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nitrogenase iron protein-like 31 c2rjzA_ not modelled 9.1 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:pilo protein; PDBTitle: crystal structure of the type 4 fimbrial biogenesis protein pilo from2 pseudomonas aeruginosa 32 c3nuhB_ not modelled 9.1 18 PDB header:isomerase Chain: B: PDB Molecule:dna gyrase subunit b; PDBTitle: a domain insertion in e. coli gyrb adopts a novel fold that plays a2 critical role in gyrase function 33 c3ip3D_ not modelled 8.3 21 PDB header:oxidoreductase Chain: D: PDB Molecule:oxidoreductase, putative; PDBTitle: structure of putative oxidoreductase (tm_0425) from2 thermotoga maritima 34 c1un9B_ not modelled 8.1 19 PDB header:kinase Chain: B: PDB Molecule:dihydroxyacetone kinase; PDBTitle: crystal structure of the dihydroxyacetone kinase from c.2 freundii in complex with amp-pnp and mg2+ 35 d1ldda_ not modelled 7.8 35 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:SCF ubiquitin ligase complex WHB domain 36 d1kwga1 not modelled 7.8 13 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 37 c5acnA_ not modelled 7.0 18 PDB header:lyase(carbon-oxygen) Chain: A: PDB Molecule:aconitase; PDBTitle: structure of activated aconitase. formation of the (4fe-4s)2 cluster in the crystal 38 d1acoa2 not modelled 7.0 18 Fold:Aconitase iron-sulfur domain Superfamily:Aconitase iron-sulfur domain Family:Aconitase iron-sulfur domain 39 d1g8fa3 not modelled 6.9 9 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:ATP sulfurylase C-terminal domain 40 c1ayrA_ not modelled 6.8 12 PDB header:sensory transduction Chain: A: PDB Molecule:arrestin; PDBTitle: arrestin from bovine rod outer segments 41 d1vjja3 not modelled 6.8 24 Fold:Immunoglobulin-like beta-sandwich Superfamily:Transglutaminase, two C-terminal domains Family:Transglutaminase, two C-terminal domains 42 d2gaxa1 not modelled 6.5 31 Fold:Peptidyl-tRNA hydrolase II Superfamily:Peptidyl-tRNA hydrolase II Family:Peptidyl-tRNA hydrolase II 43 c2zjtB_ not modelled 6.4 21 PDB header:isomerase Chain: B: PDB Molecule:dna gyrase subunit b; PDBTitle: crystal structure of dna gyrase b' domain sheds lights on2 the mechanism for t-segment navigation 44 d1qmga1 not modelled 6.2 43 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:Acetohydroxy acid isomeroreductase (ketol-acid reductoisomerase, KARI) 45 d1na6a1 not modelled 5.9 33 Fold:DNA-binding pseudobarrel domain Superfamily:DNA-binding pseudobarrel domain Family:Type II restriction endonuclease effector domain 46 d3bvua3 not modelled 5.9 19 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:alpha-mannosidase 47 d1ex0a3 not modelled 5.9 21 Fold:Immunoglobulin-like beta-sandwich Superfamily:Transglutaminase, two C-terminal domains Family:Transglutaminase, two C-terminal domains 48 c2ow7A_ not modelled 5.9 21 PDB header:hydrolase Chain: A: PDB Molecule:alpha-mannosidase 2; PDBTitle: golgi alpha-mannosidase ii complex with (1r,6s,7r,8s)-1-2 thioniabicyclo[4.3.0]nonan-7,8-diol chloride 49 c3fofD_ not modelled 5.8 11 PDB header:isomerase/dna Chain: D: PDB Molecule:dna topoisomerase 4 subunit b; PDBTitle: structural insight into the quinolone-dna cleavage complex2 of type iia topoisomerases 50 d2hzab1 not modelled 5.7 19 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:CopG-like 51 c3bnkB_ not modelled 5.7 14 PDB header:electron transport Chain: B: PDB Molecule:flavoredoxin; PDBTitle: x-ray crystal structure of flavoredoxin from methanosarcina2 acetivorans 52 c1htyA_ not modelled 5.6 18 PDB header:hydrolase Chain: A: PDB Molecule:alpha-mannosidase ii; PDBTitle: golgi alpha-mannosidase ii 53 c2zkra_ not modelled 5.6 18 PDB header:ribosomal protein/rna Chain: A: PDB Molecule:rna expansion segment es3; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 54 d1rl6a1 not modelled 5.4 30 Fold:Ribosomal protein L6 Superfamily:Ribosomal protein L6 Family:Ribosomal protein L6 55 d1vqoe1 not modelled 5.3 26 Fold:Ribosomal protein L6 Superfamily:Ribosomal protein L6 Family:Ribosomal protein L6 56 c3r7tA_ not modelled 5.1 20 PDB header:ligase Chain: A: PDB Molecule:adenylosuccinate synthetase; PDBTitle: crystal structure of adenylosuccinate synthetase from campylobacter2 jejuni