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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3nuhB_

Fold library idPDB HeaderMoleculeTitle
c3nuhB_PDB header: isomeraseChain: B: PDB Molecule: dna gyrase subunit b;PDBTitle: a domain insertion in e. coli gyrb adopts a novel fold that plays a2 critical role in gyrase function


Added to library: Sun Aug 29 03:32:27 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGLSSQEVATLITALGRYHSIIIXT
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Known secondary structure (DSSP)

BTTBB

S

STTS
S
TTT







S

 .........80.........90.........100.........110.........120.........130.........140
Sequence DADVDGSHIRTLLLTFFYRQXPEIVERGHVYIAQPPLYKVKKGKQEQYIKDDEAXDQYQISIALDGATLH
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Known secondary structure (DSSP)
SSTTTT
TT



STT

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TNASAPALAGEALEKLVSEYNATQKXINRXERRYPKAXLKELIYQPTLTEADLSDEQTVTRWVNALVSEL
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Known secondary structure (DSSP) SSS
STTTTS
S




 .........220.........230.........240.........250.........260.........270.........280
Sequence NDKEQHGSQWKFDVHTNALFEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERG
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Known secondary structure (DSSP)

SS




SSS

STTTTSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ERRQPVASFEQALDWLVKESRRGLSIQRYKGLGEXNPEQLWETTXDPESRRXLRVTVKDAIAADQLFTTL
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Known secondary structure (DSSP) S
SSTTT

S
GGGS
T
TTT



 ....
Sequence XGDA
Predicted secondary structure



SS confidence



Known secondary structure (DSSP)
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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