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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2zjtB_

Fold library idPDB HeaderMoleculeTitle
c2zjtB_PDB header: isomeraseChain: B: PDB Molecule: dna gyrase subunit b;PDBTitle: crystal structure of dna gyrase b' domain sheds lights on2 the mechanism for t-segment navigation


Added to library: Tue Mar 16 12:02:28 2010
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence FTDPRKSELYVVEGDMFQAILPLRGKDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDG
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Known secondary structure (DSSP)


GGG









GGGS
S

GGG

GGG


S

SSSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence QHISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKKINKEDGI
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Known secondary structure (DSSP)
TTTTSTTT



S

SSS

SSTTT



TTTS
 .........150.........160.........170.........180.....
Sequence QRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILM
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Known secondary structure (DSSP)

SSSSS
TTTTT
TTT



T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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