Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	I	L	I	I	Y	A	H	P	Y	P	H	H	S	H	A	N	K	R	M	L	E	Q	A	R	T	L	E	G	V	E	I	R	S	L	Y	Q	L	Y	P	D	F	N	I	D	I	A	A	E	Q	E	A	L	S	R	A	D	L	I	V
Secondary structure
SS confidence
Disorder		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		W	Q	H	P	M	Q	W	Y	S	I	P	P	L	L	K	L	W	I	D	K	V	F	S	H	G	W	A	Y	G	H	G	G	T	A	L	H	G	K	H	L	L	W	A	V	T	T	G	G	G	E	S	H	F	E	I	G	A	H	P	G
Secondary structure
SS confidence
Disorder																															?	?	?	?																					?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Sequence		F	D	V	L	S	Q	P	L	Q	A	T	A	I	Y	C	G	L	N	W	L	P	P	F	A	M	H	C	T	F	I	C	D	D	E	T	L	E	G	Q	A	R	H	Y	K	Q	R	L	L	E	W	Q	E	A	H	H	G
Secondary structure
SS confidence
Disorder																																?																								?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 3eyw chain A Region: 1 - 174 Aligned: 174 Modelled: 174 Confidence: 100.0% Identity: 100% PDB header:transport protein Chain: A: PDB Molecule:c-terminal domain of glutathione-regulated potassium-efflux PDBTitle: crystal structure of the c-terminal domain of e. coli kefc in complex2 with keff Phyre2 PDB 3f2v chain A Region: 2 - 170 Aligned: 168 Modelled: 169 Confidence: 100.0% Identity: 35% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:general stress protein 14; PDBTitle: crystal structure of the general stress protein 142 (tde0354) in complex with fmn from treponema denticola,3 northeast structural genomics consortium target tdr58. Phyre2 PDB 1dxq chain A Region: 2 - 173 Aligned: 172 Modelled: 172 Confidence: 100.0% Identity: 27% Fold: Flavodoxin-like Superfamily: Flavoproteins Family: Quinone reductase Phyre2 PDB 1qrd chain A Region: 2 - 173 Aligned: 172 Modelled: 172 Confidence: 100.0% Identity: 27% Fold: Flavodoxin-like Superfamily: Flavoproteins Family: Quinone reductase Phyre2 PDB 3ha2 chain B Region: 2 - 168 Aligned: 161 Modelled: 167 Confidence: 100.0% Identity: 30% PDB header:oxidoreductase Chain: B: PDB Molecule:nadph-quinone reductase; PDBTitle: crystal structure of protein (nadph-quinone reductase) from2 p.pentosaceus, northeast structural genomics consortium target ptr24a Phyre2 PDB 1d4a chain A Region: 2 - 173 Aligned: 172 Modelled: 172 Confidence: 100.0% Identity: 27% Fold: Flavodoxin-like Superfamily: Flavoproteins Family: Quinone reductase Phyre2 PDB 2amj chain D Region: 2 - 170 Aligned: 160 Modelled: 169 Confidence: 100.0% Identity: 26% PDB header:oxidoreductase Chain: D: PDB Molecule:modulator of drug activity b; PDBTitle: crystal structure of modulator of drug activity b from escherichia2 coli o157:h7 Phyre2 PDB 3rpe chain A Region: 2 - 170 Aligned: 167 Modelled: 169 Confidence: 100.0% Identity: 30% PDB header:oxidoreductase Chain: A: PDB Molecule:modulator of drug activity b; PDBTitle: 1.1 angstrom crystal structure of putative modulator of drug activity2 (mdab) from yersinia pestis co92. Phyre2 PDB 2qwx chain A domain 1 Region: 2 - 173 Aligned: 172 Modelled: 172 Confidence: 100.0% Identity: 33% Fold: Flavodoxin-like Superfamily: Flavoproteins Family: Quinone reductase Phyre2 PDB 3lcm chain B Region: 2 - 170 Aligned: 165 Modelled: 165 Confidence: 100.0% Identity: 21% PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of smu.1420 from streptococcus mutans ua159 Phyre2 PDB 3p0r chain A Region: 2 - 174 Aligned: 169 Modelled: 173 Confidence: 100.0% Identity: 15% PDB header:oxidoreductase Chain: A: PDB Molecule:azoreductase; PDBTitle: crystal structure of azoreductase from bacillus anthracis str. sterne Phyre2 PDB 2hpv chain A Region: 2 - 174 Aligned: 164 Modelled: 173 Confidence: 100.0% Identity: 21% PDB header:oxidoreductase Chain: A: PDB Molecule:fmn-dependent nadh-azoreductase; PDBTitle: crystal structure of fmn-dependent azoreductase from enterococcus2 faecalis Phyre2 PDB 2v9c chain A Region: 2 - 173 Aligned: 164 Modelled: 172 Confidence: 100.0% Identity: 23% PDB header:oxidoreductase Chain: A: PDB Molecule:fmn-dependent nadh-azoreductase 1; PDBTitle: x-ray crystallographic structure of a pseudomonas2 aeruginosa azoreductase in complex with methyl red. Phyre2 PDB 2z98 chain A domain 1 Region: 2 - 173 Aligned: 165 Modelled: 172 Confidence: 100.0% Identity: 18% Fold: Flavodoxin-like Superfamily: Flavoproteins Family: Quinone reductase Phyre2 PDB 1t5b chain A Region: 2 - 173 Aligned: 165 Modelled: 172 Confidence: 100.0% Identity: 20% Fold: Flavodoxin-like Superfamily: Flavoproteins Family: Quinone reductase Phyre2 PDB 1rli chain A Region: 2 - 165 Aligned: 146 Modelled: 157 Confidence: 100.0% Identity: 16% Fold: Flavodoxin-like Superfamily: Flavoproteins Family: Hypothetical protein YwqN Phyre2 PDB 1nni chain 1 Region: 2 - 173 Aligned: 152 Modelled: 171 Confidence: 99.9% Identity: 18% Fold: Flavodoxin-like Superfamily: Flavoproteins Family: NADPH-dependent FMN reductase Phyre2 PDB 1rtt chain A Region: 2 - 173 Aligned: 157 Modelled: 159 Confidence: 99.9% Identity: 17% Fold: Flavodoxin-like Superfamily: Flavoproteins Family: NADPH-dependent FMN reductase Phyre2 PDB 3fvw chain A Region: 2 - 172 Aligned: 158 Modelled: 158 Confidence: 99.9% Identity: 17% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative nad(p)h-dependent fmn reductase; PDBTitle: crystal structure of the q8dwd8_strmu protein from2 streptococcus mutans. northeast structural genomics3 consortium target smr99. Phyre2 PDB 1sqs chain A Region: 2 - 167 Aligned: 151 Modelled: 166 Confidence: 99.9% Identity: 18% Fold: Flavodoxin-like Superfamily: Flavoproteins Family: Hypothetical protein SP1951 Phyre2 1 c3eywA_ 2 c3f2vA_ 3 d1dxqa_ 4 d1qrda_ 5 c3ha2B_ 6 d1d4aa_ 7 c2amjD_ 8 c3rpeA_ 9 d2qwxa1 10 c3lcmB_ 11 c3p0rA_ 12 c2hpvA_ 13 c2v9cA_ 14 d2z98a1 15 d1t5ba_ 16 d1rlia_ 17 d1nni1_ 18 d1rtta_ 19 c3fvwA_ 20 d1sqsa_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3eywA_ 100.0 100 PDB header:transport protein Chain: A: PDB Molecule:c-terminal domain of glutathione-regulated potassium-efflux PDBTitle: crystal structure of the c-terminal domain of e. coli kefc in complex2 with keff 2 c3f2vA_ 100.0 35 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:general stress protein 14; PDBTitle: crystal structure of the general stress protein 142 (tde0354) in complex with fmn from treponema denticola,3 northeast structural genomics consortium target tdr58. 3 d1dxqa_ 100.0 27 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Quinone reductase 4 d1qrda_ 100.0 27 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Quinone reductase 5 c3ha2B_ 100.0 30 PDB header:oxidoreductase Chain: B: PDB Molecule:nadph-quinone reductase; PDBTitle: crystal structure of protein (nadph-quinone reductase) from2 p.pentosaceus, northeast structural genomics consortium target ptr24a 6 d1d4aa_ 100.0 27 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Quinone reductase 7 c2amjD_ 100.0 26 PDB header:oxidoreductase Chain: D: PDB Molecule:modulator of drug activity b; PDBTitle: crystal structure of modulator of drug activity b from escherichia2 coli o157:h7 8 c3rpeA_ 100.0 30 PDB header:oxidoreductase Chain: A: PDB Molecule:modulator of drug activity b; PDBTitle: 1.1 angstrom crystal structure of putative modulator of drug activity2 (mdab) from yersinia pestis co92. 9 d2qwxa1 100.0 33 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Quinone reductase 10 c3lcmB_ 100.0 21 PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of smu.1420 from streptococcus mutans ua159 11 c3p0rA_ 100.0 15 PDB header:oxidoreductase Chain: A: PDB Molecule:azoreductase; PDBTitle: crystal structure of azoreductase from bacillus anthracis str. sterne 12 c2hpvA_ 100.0 21 PDB header:oxidoreductase Chain: A: PDB Molecule:fmn-dependent nadh-azoreductase; PDBTitle: crystal structure of fmn-dependent azoreductase from enterococcus2 faecalis 13 c2v9cA_ 100.0 23 PDB header:oxidoreductase Chain: A: PDB Molecule:fmn-dependent nadh-azoreductase 1; PDBTitle: x-ray crystallographic structure of a pseudomonas2 aeruginosa azoreductase in complex with methyl red. 14 d2z98a1 100.0 18 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Quinone reductase 15 d1t5ba_ 100.0 20 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Quinone reductase 16 d1rlia_ 100.0 16 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Hypothetical protein YwqN 17 d1nni1_ 99.9 18 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:NADPH-dependent FMN reductase 18 d1rtta_ 99.9 17 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:NADPH-dependent FMN reductase 19 c3fvwA_ 99.9 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative nad(p)h-dependent fmn reductase; PDBTitle: crystal structure of the q8dwd8_strmu protein from2 streptococcus mutans. northeast structural genomics3 consortium target smr99. 20 d1sqsa_ 99.9 18 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Hypothetical protein SP1951 21 c2q62A_ not modelled 99.9 15 PDB header:flavoprotein Chain: A: PDB Molecule:arsh; PDBTitle: crystal structure of arsh from sinorhizobium meliloti 22 c3k1yE_ not modelled 99.9 19 PDB header:oxidoreductase Chain: E: PDB Molecule:oxidoreductase; PDBTitle: x-ray structure of oxidoreductase from corynebacterium2 diphtheriae. orthorombic crystal form, northeast structural3 genomics consortium target cdr100d 23 d1t0ia_ not modelled 99.9 19 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:NADPH-dependent FMN reductase 24 d1ydga_ not modelled 99.9 19 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:WrbA-like 25 c2vzhA_ not modelled 99.9 19 PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-dependent fmn reductase; PDBTitle: structures of nadh:fmn oxidoreductase (emob)-fmn complex 26 c2fzvC_ not modelled 99.9 18 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:putative arsenical resistance protein; PDBTitle: crystal structure of an apo form of a flavin-binding protein from2 shigella flexneri 27 d2fzva1 not modelled 99.8 18 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:NADPH-dependent FMN reductase 28 c3b6iB_ not modelled 99.8 18 PDB header:flavoprotein Chain: B: PDB Molecule:flavoprotein wrba; PDBTitle: wrba from escherichia coli, native structure 29 d2a5la1 not modelled 99.8 19 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:WrbA-like 30 c2zkiH_ not modelled 99.8 22 PDB header:transcription Chain: H: PDB Molecule:199aa long hypothetical trp repressor binding PDBTitle: crystal structure of hypothetical trp repressor binding2 protein from sul folobus tokodaii (st0872) 31 c3d7nA_ not modelled 99.8 16 PDB header:electron transport Chain: A: PDB Molecule:flavodoxin, wrba-like protein; PDBTitle: the crystal structure of the flavodoxin, wrba-like protein from2 agrobacterium tumefaciens 32 d1e5da1 not modelled 99.7 11 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavodoxin-related 33 d1ycga1 not modelled 99.7 13 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavodoxin-related 34 d2arka1 not modelled 99.7 20 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:WrbA-like 35 c1ychD_ not modelled 99.7 13 PDB header:oxidoreductase Chain: D: PDB Molecule:nitric oxide reductase; PDBTitle: x-ray crystal structures of moorella thermoacetica fpra.2 novel diiron site structure and mechanistic insights into3 a scavenging nitric oxide reductase 36 c2ohiB_ not modelled 99.6 13 PDB header:oxidoreductase Chain: B: PDB Molecule:type a flavoprotein fpra; PDBTitle: crystal structure of coenzyme f420h2 oxidase (fpra), a diiron2 flavoprotein, reduced state 37 d1vmea1 not modelled 99.6 13 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavodoxin-related 38 c2q9uB_ not modelled 99.6 13 PDB header:oxidoreductase Chain: B: PDB Molecule:a-type flavoprotein; PDBTitle: crystal structure of the flavodiiron protein from giardia2 intestinalis 39 c1e5dA_ not modelled 99.4 14 PDB header:oxidoreductase Chain: A: PDB Molecule:rubredoxin\:oxygen oxidoreductase; PDBTitle: rubredoxin oxygen:oxidoreductase (roo) from anaerobe2 desulfovibrio gigas 40 c3fniA_ not modelled 99.4 18 PDB header:oxidoreductase Chain: A: PDB Molecule:putative diflavin flavoprotein a 3; PDBTitle: crystal structure of a diflavin flavoprotein a3 (all3895) from nostoc2 sp., northeast structural genomics consortium target nsr431a 41 c3klbA_ not modelled 99.4 15 PDB header:flavoprotein Chain: A: PDB Molecule:putative flavoprotein; PDBTitle: crystal structure of putative flavoprotein in complex with fmn2 (yp_213683.1) from bacteroides fragilis nctc 9343 at 1.75 a3 resolution 42 c1vmeB_ not modelled 99.3 13 PDB header:electron transport Chain: B: PDB Molecule:flavoprotein; PDBTitle: crystal structure of flavoprotein (tm0755) from thermotoga maritima at2 1.80 a resolution 43 c3hlyA_ not modelled 99.3 22 PDB header:flavoprotein Chain: A: PDB Molecule:flavodoxin-like domain; PDBTitle: crystal structure of the flavodoxin-like domain from2 synechococcus sp q5mzp6_synp6 protein. northeast structural3 genomics consortium target snr135d. 44 c3edoA_ not modelled 99.3 17 PDB header:flavoprotein Chain: A: PDB Molecule:putative trp repressor binding protein; PDBTitle: crystal structure of flavoprotein in complex with fmn2 (yp_193882.1) from lactobacillus acidophilus ncfm at 1.203 a resolution 45 d2fz5a1 not modelled 99.2 11 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavodoxin-related 46 d5nula_ not modelled 99.0 11 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavodoxin-related 47 c3f6sI_ not modelled 98.8 12 PDB header:electron transport Chain: I: PDB Molecule:flavodoxin; PDBTitle: desulfovibrio desulfuricans (atcc 29577) oxidized flavodoxin2 alternate conformers 48 d1ag9a_ not modelled 98.6 9 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavodoxin-related 49 c3hr4C_ not modelled 98.5 8 PDB header:oxidoreductase/metal binding protein Chain: C: PDB Molecule:nitric oxide synthase, inducible; PDBTitle: human inos reductase and calmodulin complex 50 d1tlla2 not modelled 98.5 11 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Cytochrome p450 reductase N-terminal domain-like 51 d1oboa_ not modelled 98.5 11 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavodoxin-related 52 d1ykga1 not modelled 98.4 11 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Cytochrome p450 reductase N-terminal domain-like 53 d1czna_ not modelled 98.4 13 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavodoxin-related 54 c1bvyF_ not modelled 98.4 12 PDB header:oxidoreductase Chain: F: PDB Molecule:protein (cytochrome p450 bm-3); PDBTitle: complex of the heme and fmn-binding domains of the2 cytochrome p450(bm-3) 55 d1bvyf_ not modelled 98.4 12 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavodoxin-related 56 d1b1ca_ not modelled 98.2 10 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Cytochrome p450 reductase N-terminal domain-like 57 c2wc1A_ not modelled 98.2 10 PDB header:electron transport Chain: A: PDB Molecule:flavodoxin; PDBTitle: three-dimensional structure of the nitrogen fixation2 flavodoxin (niff) from rhodobacter capsulatus at 2.2 a 58 d1f4pa_ not modelled 98.1 11 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavodoxin-related 59 d2fcra_ not modelled 98.0 10 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavodoxin-related 60 c1tllA_ not modelled 98.0 12 PDB header:oxidoreductase Chain: A: PDB Molecule:nitric-oxide synthase, brain; PDBTitle: crystal structure of rat neuronal nitric-oxide synthase2 reductase module at 2.3 a resolution. 61 d1yoba1 not modelled 97.9 10 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavodoxin-related 62 d1fuea_ not modelled 97.9 8 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavodoxin-related 63 d1ja1a2 not modelled 97.9 10 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Cytochrome p450 reductase N-terminal domain-like 64 c2hnbA_ not modelled 97.7 13 PDB header:electron transport Chain: A: PDB Molecule:protein mioc; PDBTitle: solution structure of a bacterial holo-flavodoxin 65 c2bpoA_ not modelled 94.7 13 PDB header:reductase Chain: A: PDB Molecule:nadph-cytochrom p450 reductase; PDBTitle: crystal structure of the yeast cpr triple mutant: d74g,2 y75f, k78a. 66 c1j9zB_ not modelled 94.3 9 PDB header:oxidoreductase Chain: B: PDB Molecule:nadph-cytochrome p450 reductase; PDBTitle: cypor-w677g 67 c2x2oA_ not modelled 90.6 12 PDB header:flavoprotein Chain: A: PDB Molecule:nrdi protein; PDBTitle: the flavoprotein nrdi from bacillus cereus with the2 initially oxidized fmn cofactor in an intermediate3 radiation reduced state 68 d1rlja_ not modelled 78.4 15 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavoprotein NrdI 69 d1yrba1 not modelled 77.0 11 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nitrogenase iron protein-like 70 d1yqea1 not modelled 65.4 11 Fold:Phosphorylase/hydrolase-like Superfamily:AF0625-like Family:AF0625-like 71 c1q7tA_ not modelled 56.6 15 PDB header:hydrolase Chain: A: PDB Molecule:hypothetical protein rv1170; PDBTitle: rv1170 (mshb) from mycobacterium tuberculosis 72 d1q74a_ not modelled 56.0 15 Fold:LmbE-like Superfamily:LmbE-like Family:LmbE-like 73 c3dfiA_ not modelled 55.8 15 PDB header:hydrolase Chain: A: PDB Molecule:pseudoaglycone deacetylase dbv21; PDBTitle: the crystal structure of antimicrobial reagent a40926 pseudoaglycone2 deacetylase dbv21 74 c3mw8A_ not modelled 50.5 16 PDB header:lyase Chain: A: PDB Molecule:uroporphyrinogen-iii synthase; PDBTitle: crystal structure of an uroporphyrinogen-iii synthase (sama_3255) from2 shewanella amazonensis sb2b at 1.65 a resolution 75 d2r4qa1 not modelled 42.8 21 Fold:Phosphotyrosine protein phosphatases I-like Superfamily:PTS system IIB component-like Family:PTS system, Fructose specific IIB subunit-like 76 c3dfmA_ not modelled 40.5 15 PDB header:hydrolase Chain: A: PDB Molecule:teicoplanin pseudoaglycone deacetylase orf2; PDBTitle: the crystal structure of the zinc inhibited form of2 teicoplanin deacetylase orf2 77 d1uana_ not modelled 38.5 11 Fold:LmbE-like Superfamily:LmbE-like Family:LmbE-like 78 c2kokA_ not modelled 30.6 13 PDB header:oxidoreductase Chain: A: PDB Molecule:arsenate reductase; PDBTitle: solution structure of an arsenate reductase (arsc) related protein2 from brucella melitensis. seattle structural genomics center for3 infectious disease target braba.00007.a. 79 c3l4eA_ not modelled 29.8 11 PDB header:hydrolase Chain: A: PDB Molecule:uncharacterized peptidase lmo0363; PDBTitle: 1.5a crystal structure of a putative peptidase e protein from listeria2 monocytogenes egd-e 80 d1jala1 not modelled 29.6 15 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 81 d1mv8a3 not modelled 22.0 18 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:UDP-glucose/GDP-mannose dehydrogenase C-terminal domain Family:UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 82 c3iprC_ not modelled 21.8 18 PDB header:transferase Chain: C: PDB Molecule:pts system, iia component; PDBTitle: crystal structure of the enterococcus faecalis gluconate2 specific eiia phosphotransferase system component 83 c2ixdB_ not modelled 21.5 18 PDB header:hydrolase Chain: B: PDB Molecule:lmbe-related protein; PDBTitle: crystal structure of the putative deacetylase bc1534 from2 bacilus cereus 84 c2gedB_ not modelled 20.8 7 PDB header:protein transport, signaling protein Chain: B: PDB Molecule:signal recognition particle receptor beta PDBTitle: signal recognition particle receptor beta-subunit in2 nucleotide-free dimerized form 85 d1jr2a_ not modelled 20.0 5 Fold:HemD-like Superfamily:HemD-like Family:HemD-like 86 c1jr2A_ not modelled 20.0 5 PDB header:lyase Chain: A: PDB Molecule:uroporphyrinogen-iii synthase; PDBTitle: structure of uroporphyrinogen iii synthase 87 d1ir6a_ not modelled 18.8 10 Fold:DHH phosphoesterases Superfamily:DHH phosphoesterases Family:Exonuclease RecJ 88 c1ir6A_ not modelled 18.8 10 PDB header:hydrolase Chain: A: PDB Molecule:exonuclease recj; PDBTitle: crystal structure of exonuclease recj bound to manganese 89 c3gg2B_ not modelled 17.4 7 PDB header:oxidoreductase Chain: B: PDB Molecule:sugar dehydrogenase, udp-glucose/gdp-mannose PDBTitle: crystal structure of udp-glucose 6-dehydrogenase from2 porphyromonas gingivalis bound to product udp-glucuronate 90 d1z3ea1 not modelled 15.7 14 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:ArsC-like 91 c2gfqC_ not modelled 15.3 12 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:upf0204 protein ph0006; PDBTitle: structure of protein of unknown function ph0006 from pyrococcus2 horikoshii 92 c3n39D_ not modelled 15.2 12 PDB header:oxidoreductase Chain: D: PDB Molecule:protein nrdi; PDBTitle: ribonucleotide reductase dimanganese(ii)-nrdf from escherichia coli in2 complex with nrdi 93 c3mtqA_ not modelled 15.1 15 PDB header:transferase Chain: A: PDB Molecule:putative phosphoenolpyruvate-dependent sugar PDBTitle: crystal structure of a putative phosphoenolpyruvate-dependent sugar2 phosphotransferase system (pts) permease (kpn_04802) from klebsiella3 pneumoniae subsp. pneumoniae mgh 78578 at 1.70 a resolution 94 d1t4za_ not modelled 13.1 15 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:KaiB-like 95 d2r48a1 not modelled 12.3 21 Fold:Phosphotyrosine protein phosphatases I-like Superfamily:PTS system IIB component-like Family:PTS system, Fructose specific IIB subunit-like 96 c3l78A_ not modelled 11.7 12 PDB header:transcription Chain: A: PDB Molecule:regulatory protein spx; PDBTitle: the crystal structure of smu.1142c from streptococcus mutans ua159 97 c3g79A_ not modelled 11.3 12 PDB header:oxidoreductase Chain: A: PDB Molecule:ndp-n-acetyl-d-galactosaminuronic acid dehydrogenase; PDBTitle: crystal structure of ndp-n-acetyl-d-galactosaminuronic acid2 dehydrogenase from methanosarcina mazei go1 98 d1t3ta3 not modelled 10.4 18 Fold:PurS-like Superfamily:PurS-like Family:FGAM synthase PurL, PurS-like domain 99 c2yvuA_ not modelled 10.1 8 PDB header:transferase Chain: A: PDB Molecule:probable adenylyl-sulfate kinase; PDBTitle: crystal structure of ape1195

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0