Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	L	K	P	E	M	I	E	K	L	N	E	Q	M	N	L	E	L	Y	S	S	L	L	Y	Q	Q	M	S	A	W	C	S	Y	H	T	F	E	G	A	A	A	F	L	R	R	H	A	Q	E	E	M	T	H	M	Q	R	L	F	D	Y
Secondary structure
SS confidence
Disorder		?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		L	T	D	T	G	N	L	P	R	I	N	T	V	E	S	P	F	A	E	Y	S	S	L	D	E	L	F	Q	E	T	Y	K	H	E	Q	L	I	T	Q	K	I	N	E	L	A	H	A	A	M	T	N	Q	D	Y	P	T	F	N	F	L
Secondary structure
SS confidence
Disorder																	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Sequence		Q	W	Y	V	S	E	Q	H	E	E	E	K	L	F	K	S	I	I	D	K	L	S	L	A	G	K	S	G	E	G	L	Y	F	I	D	K	E	L	S	T	L	D	T	Q	N
Secondary structure
SS confidence
Disorder																														?												?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 3qz3 chain A Region: 1 - 164 Aligned: 164 Modelled: 163 Confidence: 100.0% Identity: 59% PDB header:oxidoreductase Chain: A: PDB Molecule:ferritin; PDBTitle: the crystal structure of ferritin from vibrio cholerae o1 biovar el2 tor str. n16961 Phyre2 PDB 3bvk chain C Region: 1 - 163 Aligned: 163 Modelled: 163 Confidence: 100.0% Identity: 42% PDB header:oxidoreductase Chain: C: PDB Molecule:ferritin; PDBTitle: structural basis for the iron uptake mechanism of helicobacter pylori2 ferritin Phyre2 PDB 1eum chain A Region: 2 - 162 Aligned: 161 Modelled: 161 Confidence: 100.0% Identity: 100% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 2jd8 chain C Region: 1 - 165 Aligned: 165 Modelled: 165 Confidence: 100.0% Identity: 38% PDB header:metal transport Chain: C: PDB Molecule:ferritin homolog; PDBTitle: crystal structure of the zn-soaked ferritin from the2 hyperthermophilic archaeal anaerobe pyrococcus furiosus Phyre2 PDB 1s3q chain A domain 1 Region: 2 - 160 Aligned: 159 Modelled: 159 Confidence: 100.0% Identity: 37% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 1krq chain A Region: 1 - 162 Aligned: 162 Modelled: 162 Confidence: 100.0% Identity: 47% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 1vlg chain A Region: 1 - 160 Aligned: 160 Modelled: 160 Confidence: 100.0% Identity: 31% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 3a9q chain R Region: 2 - 160 Aligned: 158 Modelled: 159 Confidence: 100.0% Identity: 25% PDB header:oxidoreductase Chain: R: PDB Molecule: PDBTitle: crystal structure analysis of e173a variant of the soybean2 ferritin sfer4 Phyre2 PDB 1r03 chain A Region: 2 - 158 Aligned: 157 Modelled: 157 Confidence: 100.0% Identity: 23% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 1rcd chain A Region: 2 - 158 Aligned: 157 Modelled: 157 Confidence: 100.0% Identity: 25% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 3qd8 chain M Region: 5 - 163 Aligned: 156 Modelled: 159 Confidence: 100.0% Identity: 19% PDB header:metal binding protein Chain: M: PDB Molecule:probable bacterioferritin bfrb; PDBTitle: crystal structure of mycobacterium tuberculosis bfrb Phyre2 PDB 1lb3 chain A Region: 2 - 160 Aligned: 157 Modelled: 158 Confidence: 100.0% Identity: 20% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 2cei chain A domain 1 Region: 1 - 158 Aligned: 158 Modelled: 158 Confidence: 100.0% Identity: 23% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 1mfr chain A Region: 1 - 158 Aligned: 158 Modelled: 158 Confidence: 100.0% Identity: 26% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 2za7 chain A domain 1 Region: 1 - 158 Aligned: 158 Modelled: 158 Confidence: 100.0% Identity: 19% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 1z6o chain M domain 1 Region: 1 - 161 Aligned: 161 Modelled: 161 Confidence: 100.0% Identity: 21% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 3e6s chain D Region: 3 - 157 Aligned: 155 Modelled: 155 Confidence: 100.0% Identity: 27% PDB header:oxidoreductase Chain: D: PDB Molecule:ferritin; PDBTitle: crystal structure of ferritin soaked with iron from pseudo-2 nitzschia multiseries Phyre2 PDB 1z6o chain A domain 1 Region: 6 - 160 Aligned: 155 Modelled: 155 Confidence: 100.0% Identity: 15% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 1bg7 chain A Region: 2 - 160 Aligned: 140 Modelled: 140 Confidence: 100.0% Identity: 25% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 1jgc chain A Region: 3 - 160 Aligned: 157 Modelled: 158 Confidence: 100.0% Identity: 15% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 1 c3qz3A_ 2 c3bvkC_ 3 d1euma_ 4 c2jd8C_ 5 d1s3qa1 6 d1krqa_ 7 d1vlga_ 8 c3a9qR_ 9 d1r03a_ 10 d1rcda_ 11 c3qd8M_ 12 d1lb3a_ 13 d2ceia1 14 d1mfra_ 15 d2za7a1 16 d1z6om1 17 c3e6sD_ 18 d1z6oa1 19 d1bg7a_ 20 d1jgca_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3qz3A_ 100.0 59 PDB header:oxidoreductase Chain: A: PDB Molecule:ferritin; PDBTitle: the crystal structure of ferritin from vibrio cholerae o1 biovar el2 tor str. n16961 2 c3bvkC_ 100.0 42 PDB header:oxidoreductase Chain: C: PDB Molecule:ferritin; PDBTitle: structural basis for the iron uptake mechanism of helicobacter pylori2 ferritin 3 d1euma_ 100.0 100 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 4 c2jd8C_ 100.0 38 PDB header:metal transport Chain: C: PDB Molecule:ferritin homolog; PDBTitle: crystal structure of the zn-soaked ferritin from the2 hyperthermophilic archaeal anaerobe pyrococcus furiosus 5 d1s3qa1 100.0 37 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 6 d1krqa_ 100.0 47 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 7 d1vlga_ 100.0 31 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 8 c3a9qR_ 100.0 25 PDB header:oxidoreductase Chain: R: PDB Molecule: PDBTitle: crystal structure analysis of e173a variant of the soybean2 ferritin sfer4 9 d1r03a_ 100.0 23 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 10 d1rcda_ 100.0 25 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 11 c3qd8M_ 100.0 19 PDB header:metal binding protein Chain: M: PDB Molecule:probable bacterioferritin bfrb; PDBTitle: crystal structure of mycobacterium tuberculosis bfrb 12 d1lb3a_ 100.0 20 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 13 d2ceia1 100.0 23 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 14 d1mfra_ 100.0 26 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 15 d2za7a1 100.0 19 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 16 d1z6om1 100.0 21 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 17 c3e6sD_ 100.0 27 PDB header:oxidoreductase Chain: D: PDB Molecule:ferritin; PDBTitle: crystal structure of ferritin soaked with iron from pseudo-2 nitzschia multiseries 18 d1z6oa1 100.0 15 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 19 d1bg7a_ 100.0 25 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 20 d1jgca_ 100.0 15 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 21 c3r2rA_ not modelled 100.0 17 PDB header:metal binding protein Chain: A: PDB Molecule:bacterioferritin; PDBTitle: 1.65a resolution structure of iron soaked ftna from pseudomonas2 aeruginosa (ph 6.0) 22 c3gvyC_ not modelled 100.0 18 PDB header:metal binding protein Chain: C: PDB Molecule:bacterioferritin; PDBTitle: crystal structure of bacterioferritin from r.sphaeroides 23 d2htna1 not modelled 100.0 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 24 d1nf4a_ not modelled 100.0 17 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 25 c3fvbB_ not modelled 100.0 21 PDB header:metal binding protein Chain: B: PDB Molecule:bacterioferritin; PDBTitle: crystal structure of ferritin (bacterioferritin) from2 brucella melitensis 26 d2fkza1 not modelled 100.0 16 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 27 c3bknB_ not modelled 100.0 20 PDB header:metal binding protein Chain: B: PDB Molecule:bacterioferritin; PDBTitle: the structure of mycobacterial bacterioferritin 28 d1j30a_ not modelled 99.9 15 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 29 c2qqyA_ not modelled 99.9 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:sigma b operon; PDBTitle: crystal structure of ferritin like, diiron-carboxylate proteins from2 bacillus anthracis str. ames 30 d1lkoa1 not modelled 99.9 12 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 31 c2vzbA_ not modelled 99.9 16 PDB header:metal transport Chain: A: PDB Molecule:putative bacterioferritin-related protein; PDBTitle: a dodecameric thioferritin in the bacterial domain, characterization2 of the bacterioferritin-related protein from bacteroides fragilis 32 d1yv1a1 not modelled 99.9 13 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 33 c2clbP_ not modelled 99.9 15 PDB header:metal binding protein Chain: P: PDB Molecule:dps-like protein; PDBTitle: the structure of the dps-like protein from sulfolobus2 solfataricus reveals a bacterioferritin-like di-metal3 binding site within a dps-like dodecameric assembly 34 d1yuza1 not modelled 99.9 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 35 d1nnqa1 not modelled 99.9 15 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 36 c1dvbA_ not modelled 99.9 13 PDB header:electron transport Chain: A: PDB Molecule:rubrerythrin; PDBTitle: rubrerythrin 37 c1yuzB_ not modelled 99.8 11 PDB header:oxidoreductase Chain: B: PDB Molecule:nigerythrin; PDBTitle: partially reduced state of nigerythrin 38 d1o9ra_ not modelled 99.8 10 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 39 c2hr5B_ not modelled 99.8 15 PDB header:metal binding protein Chain: B: PDB Molecule:rubrerythrin; PDBTitle: pf1283- rubrerythrin from pyrococcus furiosus iron bound form 40 c2c41K_ not modelled 99.8 14 PDB header:iron-binding/oxidation protein Chain: K: PDB Molecule:dps family dna-binding stress response protein; PDBTitle: x-ray structure of dps from thermosynechococcus elongatus 41 d1jiga_ not modelled 99.8 15 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 42 c2vxxB_ not modelled 99.8 15 PDB header:dna-binding protein Chain: B: PDB Molecule:starvation induced dna binding protein; PDBTitle: x-ray structure of dpsa from thermosynechococcus elongatus 43 c3iq1A_ not modelled 99.8 10 PDB header:metal transport Chain: A: PDB Molecule:dps family protein; PDBTitle: crystal structure of dps protein from vibrio cholerae o1, a member of2 a broad superfamily of ferritin-like diiron-carboxylate proteins 44 d1ji5a_ not modelled 99.8 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 45 c2d5kC_ not modelled 99.8 13 PDB header:metal binding protein Chain: C: PDB Molecule:dps family protein; PDBTitle: crystal structure of dps from staphylococcus aureus 46 d1tjoa_ not modelled 99.7 13 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 47 c2chpC_ not modelled 99.7 15 PDB header:dna-binding protein Chain: C: PDB Molecule:metalloregulation dna-binding stress protein; PDBTitle: crystal structure of the dodecameric ferritin mrga from2 b.subtilis 168 48 d2oh3a1 not modelled 99.7 13 Fold:Ferritin-like Superfamily:Ferritin-like Family:AMB4284-like 49 c3qhbA_ not modelled 99.7 11 PDB header:metal transport Chain: A: PDB Molecule:symerythrin; PDBTitle: crystal structure of oxidized symerythrin from cyanophora paradoxa 50 d1n1qa_ not modelled 99.7 11 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 51 c2c6rA_ not modelled 99.7 11 PDB header:dna-binding protein Chain: A: PDB Molecule:dna-binding stress response protein, dps family; PDBTitle: fe-soaked crystal structure of the dps92 from deinococcus2 radiodurans 52 d1vela_ not modelled 99.7 9 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 53 c3kwoA_ not modelled 99.7 9 PDB header:oxidoreductase Chain: A: PDB Molecule:putative bacterioferritin; PDBTitle: crystal structure of putative bacterioferritin from2 campylobacter jejuni 54 d2fjca1 not modelled 99.6 7 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 55 c3oghB_ not modelled 99.6 12 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:protein ycie; PDBTitle: crystal structure of ycie protein from e. coli cft073, a member of2 ferritine-like superfamily of diiron-containing four-helix-bundle3 proteins 56 d1ji4a_ not modelled 99.6 11 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 57 c2wlaA_ not modelled 99.6 8 PDB header:oxidoreductase Chain: A: PDB Molecule:dps-like peroxide resistance protein; PDBTitle: streptococcus pyogenes dpr 58 d2bk6a1 not modelled 99.6 18 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 59 d1dpsa_ not modelled 99.6 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 60 c2xgwA_ not modelled 99.6 8 PDB header:metal binding protein Chain: A: PDB Molecule:peroxide resistance protein; PDBTitle: zinc-bound crystal structure of streptococcus pyogenes dpr 61 d1umna_ not modelled 99.6 9 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 62 c2z90D_ not modelled 99.6 15 PDB header:dna binding protein Chain: D: PDB Molecule:starvation-inducible dna-binding protein or fine PDBTitle: crystal structure of the second dps from mycobacterium2 smegmatis 63 c2f7nA_ not modelled 99.6 13 PDB header:dna binding protein Chain: A: PDB Molecule:dna-binding stress response protein, dps family; PDBTitle: structure of d. radiodurans dps-1 64 d2yw6a1 not modelled 99.5 9 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 65 c2yjkF_ not modelled 99.5 6 PDB header:metal-binding protein Chain: F: PDB Molecule:afp; PDBTitle: structure of dps from microbacterium arborescens in the2 high iron form 66 c2pybC_ not modelled 99.4 13 PDB header:metal transport Chain: C: PDB Molecule:neutrophil activating protein; PDBTitle: napa protein from borrelia burgdorferi 67 d2fzfa1 not modelled 99.3 11 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 68 d1vjxa_ not modelled 99.1 12 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 69 d1zs3a1 not modelled 98.9 15 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 70 d1jkva_ not modelled 98.9 19 Fold:Ferritin-like Superfamily:Ferritin-like Family:Manganese catalase (T-catalase) 71 d1zuja1 not modelled 98.8 16 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 72 c2ib0A_ not modelled 98.6 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical alanine rich protein; PDBTitle: crystal structure of a conserved hypothetical protein, rv2844, from2 mycobacterium tuberculosis 73 d2ib0a1 not modelled 98.6 12 Fold:Ferritin-like Superfamily:Ferritin-like Family:Rv2844-like 74 d2cwla1 not modelled 98.4 10 Fold:Ferritin-like Superfamily:Ferritin-like Family:Manganese catalase (T-catalase) 75 c3q4nA_ not modelled 98.3 13 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein mj0754; PDBTitle: crystal structure of hypothetical protein mj0754 from methanococcus2 jannaschii dsm 2661 76 c3hiuB_ not modelled 98.1 10 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of protein (xcc3681) from xanthomonas2 campestris pv. campestris str. atcc 33913 77 d1za0a1 not modelled 97.1 16 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 78 d1zpya1 not modelled 96.7 23 Fold:Ferritin-like Superfamily:Ferritin-like Family:half-ferritin 79 d2gs4a1 not modelled 96.6 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:YciF-like 80 d2gyqa1 not modelled 95.8 12 Fold:Ferritin-like Superfamily:Ferritin-like Family:YciF-like 81 c3hl1B_ not modelled 95.8 17 PDB header:metal binding protein Chain: B: PDB Molecule:ferritin like protein; PDBTitle: crystal structure of a ferritin like protein (cc_0557) from2 caulobacter vibrioides at 1.95 a resolution 82 d2itba1 not modelled 95.1 13 Fold:Ferritin-like Superfamily:Ferritin-like Family:MiaE-like 83 d1afra_ not modelled 94.7 20 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 84 c3dhiA_ not modelled 89.8 12 PDB header:oxidoreductase Chain: A: PDB Molecule:toluene 4-monooxygenase hydroxylase alpha subunit; PDBTitle: crystal structure of reduced toluene 4-monoxygenase hydroxylase2 complexed with effector protein 85 c1u7mB_ not modelled 78.1 21 PDB header:de novo protein Chain: B: PDB Molecule:four-helix bundle model; PDBTitle: solution structure of a diiron protein model: due ferri(ii)2 turn mutant 86 c3fseB_ not modelled 77.1 16 PDB header:hydrolase Chain: B: PDB Molecule:two-domain protein containing dj-1/thij/pfpi-like and PDBTitle: crystal structure of a two-domain protein containing dj-1/thij/pfpi-2 like and ferritin-like domains (ava_4496) from anabaena variabilis3 atcc 29413 at 1.90 a resolution 87 d1mxra_ not modelled 56.6 17 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 88 c1lt1G_ not modelled 56.3 16 PDB header:de novo protein Chain: G: PDB Molecule:l13g-df1; PDBTitle: sliding helix induced change of coordination geometry in a2 model di-mn(ii) protein 89 c3dhgB_ not modelled 56.2 8 PDB header:oxidoreductase Chain: B: PDB Molecule:toluene 4-monooxygenase hydroxylase beta subunit; PDBTitle: crystal struture of toluene 4-monoxygenase hydroxylase 90 c3ddeB_ not modelled 56.1 11 PDB header:unknown function Chain: B: PDB Molecule:tena/thi-4 protein, domain of unknown function with a heme PDBTitle: crystal structure of a domain of unknown function with a heme2 oxygenase-like fold (sden_3740) from shewanella denitrificans os2173 at 2.30 a resolution 91 c1yfdA_ not modelled 50.8 17 PDB header:oxidoreductase Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase 1 beta PDBTitle: crystal structure of the y122h mutant of ribonucleotide2 reductase r2 protein from e. coli 92 c2vuxB_ not modelled 50.5 6 PDB header:oxidoreductase Chain: B: PDB Molecule:ribonucleoside-diphosphate reductase subunit m2 b; PDBTitle: human ribonucleotide reductase, subunit m2 b 93 d1mhyb_ not modelled 42.6 11 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 94 c1smqD_ not modelled 41.5 14 PDB header:oxidoreductase Chain: D: PDB Molecule:ribonucleoside-diphosphate reductase small chain PDBTitle: structure of the ribonucleotide reductase rnr2 homodimer2 from saccharomyces cerevisiae 95 d2inca1 not modelled 41.4 13 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 96 d1syya_ not modelled 40.0 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 97 c1syyA_ not modelled 40.0 14 PDB header:replication,oxidoreductase Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase beta chain; PDBTitle: crystal structure of the r2 subunit of ribonucleotide reductase from2 chlamydia trachomatis 98 d2incb1 not modelled 35.8 9 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 99 d1smsa_ not modelled 32.5 13 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 100 d1jk0a_ not modelled 32.4 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 101 c2o1zA_ not modelled 31.8 12 PDB header:oxidoreductase Chain: A: PDB Molecule:ribonucleotide reductase subunit r2; PDBTitle: plasmodium vivax ribonucleotide reductase subunit r22 (pv086155) 102 c3b5oA_ not modelled 31.1 17 PDB header:oxidoreductase Chain: A: PDB Molecule:cadd-like protein of unknown function; PDBTitle: crystal structure of a cadd-like protein of unknown function2 (npun_f6505) from nostoc punctiforme pcc 73102 at 1.35 a resolution 103 c2rccC_ not modelled 29.3 7 PDB header:oxidoreductase Chain: C: PDB Molecule:ribonucleoside-diphosphate reductase subunit beta; PDBTitle: crystal structure of putative class i ribonucleotide reductase2 (np_241368.1) from bacillus halodurans at 1.90 a resolution 104 c2rf4B_ not modelled 28.7 22 PDB header:transferase Chain: B: PDB Molecule:dna-directed rna polymerase i subunit rpa4; PDBTitle: crystal structure of the rna polymerase i subcomplex a14/43 105 c2p1iA_ not modelled 25.0 12 PDB header:oxidoreductase Chain: A: PDB Molecule:ribonucleotide reductase, small chain; PDBTitle: plasmodium yoelii ribonucleotide reductase subunit r2 (py03671) 106 d1jk0b_ not modelled 24.1 13 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 107 d1w68a_ not modelled 23.6 13 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0