Email l.a.kelley@imperial.ac.uk Description P0AAS0 Date Thu Jan 5 11:13:38 GMT 2012 Unique Job ID 1e87f017522fc46f

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1df6a_ 61.5 100 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Cyclotides Family:Cycloviolacin 2 c1df6A_ 61.5 100 PDB header:plant protein Chain: A: PDB Molecule:cycloviolacin o1; PDBTitle: 1h nmr solution structure of cycloviolacin o1 3 d2bjca1 48.6 19 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator 4 d1lcda_ 48.5 16 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator 5 d1qpza1 47.0 19 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator 6 c2l8nA_ 45.2 23 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional repressor cytr; PDBTitle: nmr structure of the cytidine repressor dna binding domain in presence2 of operator half-site dna 7 d1nbja_ 43.9 100 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Cyclotides Family:Cycloviolacin 8 c1nbjA_ 43.9 100 PDB header:plant protein Chain: A: PDB Molecule:cycloviolacin o1; PDBTitle: high-resolution solution structure of cycloviolacin o1 9 c2c3hC_ 41.0 36 PDB header:carbohydrate-binding module Chain: C: PDB Molecule:alpha-amylase g-6; PDBTitle: structure of cbm26 from bacillus halodurans amylase in2 complex with maltose 10 d1uxca_ 38.6 19 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator 11 c2b5kA_ 37.8 55 PDB header:antimicrobial protein Chain: A: PDB Molecule:polyphemusin-1; PDBTitle: pv5 nmr solution structure in dpc micelles 12 d2phcb1 36.4 36 Fold:Cyclophilin-like Superfamily:Cyclophilin-like Family:PH0987 C-terminal domain-like 13 c2lcvA_ 31.9 23 PDB header:transcription regulator Chain: A: PDB Molecule:hth-type transcriptional repressor cytr; PDBTitle: structure of the cytidine repressor dna-binding domain; an alternate2 calculation 14 d1efaa1 29.6 16 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator 15 c3bd1B_ 24.4 14 PDB header:transcription Chain: B: PDB Molecule:cro protein; PDBTitle: structure of the cro protein from putative prophage element xfaso 1 in2 xylella fastidiosa strain ann-1 16 c2zp2B_ 22.1 42 PDB header:transferase inhibitor Chain: B: PDB Molecule:kinase a inhibitor; PDBTitle: c-terminal domain of kipi from bacillus subtilis 17 c2vt1A_ 22.0 22 PDB header:membrane protein Chain: A: PDB Molecule:surface presentation of antigens protein spas; PDBTitle: crystal structure of the cytoplasmic domain of spa40, the2 specificity switch for the shigella flexneri type iii3 secretion system 18 c3h9xB_ 20.8 28 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein pspto_3016; PDBTitle: crystal structure of the pspto_3016 protein from2 pseudomonas syringae, northeast structural genomics3 consortium target psr293 19 d1uxda_ 19.6 19 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator 20 c3hgtA_ 18.5 29 PDB header:transcription Chain: A: PDB Molecule:hda1 complex subunit 3; PDBTitle: structural and functional studies of the yeast class ii hda12 hdac complex 21 c2phcB_ not modelled 16.6 33 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein ph0987; PDBTitle: crystal structure of conserved uncharacterized protein ph0987 from2 pyrococcus horikoshii 22 d2ptda_ not modelled 16.4 10 Fold:TIM beta/alpha-barrel Superfamily:PLC-like phosphodiesterases Family:Bacterial PLC 23 d2duca1 not modelled 16.2 37 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral cysteine protease of trypsin fold 24 d2hsga1 not modelled 16.0 29 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator 25 d2elca1 not modelled 15.5 20 Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 26 c2rp4C_ not modelled 15.5 20 PDB header:transcription Chain: C: PDB Molecule:transcription factor p53; PDBTitle: solution structure of the oligomerization domain in dmp53 27 d1vb8a_ not modelled 15.0 100 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Cyclotides Family:Cycloviolacin 28 c1vb8A_ not modelled 15.0 100 PDB header:plant protein Chain: A: PDB Molecule:viola hederacea root peptide 1; PDBTitle: solution structure of vhr1, the first cyclotide from root2 tissue 29 c1bdhA_ not modelled 14.4 19 PDB header:transcription/dna Chain: A: PDB Molecule:protein (purine repressor); PDBTitle: purine repressor mutant-hypoxanthine-palindromic operator2 complex 30 c1bcrA_ not modelled 13.2 15 PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:serine carboxypeptidase ii; PDBTitle: complex of the wheat serine carboxypeptidase, cpdw-ii, with the2 microbial peptide aldehyde inhibitor, antipain, and arginine at room3 temperature 31 d1us7b_ not modelled 12.9 8 Fold:Hsp90 co-chaperone CDC37 Superfamily:Hsp90 co-chaperone CDC37 Family:Hsp90 co-chaperone CDC37 32 c1us7B_ not modelled 12.9 8 PDB header:chaperone Chain: B: PDB Molecule:hsp90 co-chaperone cdc37; PDBTitle: complex of hsp90 and p50 33 c1t3jA_ not modelled 12.0 18 PDB header:membrane protein Chain: A: PDB Molecule:mitofusin 1; PDBTitle: mitofusin domain hr2 v686m/i708m mutant 34 c3odnA_ not modelled 11.7 25 PDB header:membrane protein Chain: A: PDB Molecule:dally-like protein; PDBTitle: the crystal structure of drosophila dally-like protein core domain 35 c2l27A_ not modelled 11.3 50 PDB header:membrane protein, peptide binding protei Chain: A: PDB Molecule:seven transmembrane helix receptor; PDBTitle: nmr structure of the ecd1 of crf-r1 in complex with a peptide agonist 36 c3e90B_ not modelled 11.2 63 PDB header:hydrolase Chain: B: PDB Molecule:ns3 protease; PDBTitle: west nile vi rus ns2b-ns3protease in complexed with2 inhibitor naph-kkr-h 37 d2ijob1 not modelled 11.0 63 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 38 d2fp7b1 not modelled 10.9 63 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 39 d1xp8a2 not modelled 10.9 16 Fold:Anti-LPS factor/recA domain Superfamily:RecA protein, C-terminal domain Family:RecA protein, C-terminal domain 40 c3n7sB_ not modelled 10.7 27 PDB header:membrane protein Chain: B: PDB Molecule:calcitonin gene-related peptide type 1 receptor; PDBTitle: crystal structure of the ectodomain complex of the cgrp receptor, a2 class-b gpcr, reveals the site of drug antagonism 41 d2ok5a4 not modelled 10.6 50 Fold:Complement control module/SCR domain Superfamily:Complement control module/SCR domain Family:Complement control module/SCR domain 42 c3q7tB_ not modelled 10.5 20 PDB header:transcription Chain: B: PDB Molecule:transcriptional regulatory protein; PDBTitle: 2.15a resolution structure (i41 form) of the chxr receiver domain from2 chlamydia trachomatis 43 d1f37b_ not modelled 10.2 30 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioredoxin-like 2Fe-2S ferredoxin 44 c3d23A_ not modelled 10.1 26 PDB header:hydrolase Chain: A: PDB Molecule:3c-like proteinase; PDBTitle: main protease of hcov-hku1 45 c2q6fB_ not modelled 9.7 26 PDB header:hydrolase Chain: B: PDB Molecule:infectious bronchitis virus (ibv) main protease; PDBTitle: crystal structure of infectious bronchitis virus (ibv) main2 protease in complex with a michael acceptor inhibitor n3 46 d1lvoa_ not modelled 9.6 26 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral cysteine protease of trypsin fold 47 d2vgna2 not modelled 9.4 17 Fold:Ribonuclease H-like motif Superfamily:Translational machinery components Family:ERF1/Dom34 middle domain-like 48 c2re3A_ not modelled 9.3 27 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a duf1285 family protein (spo_0140) from2 silicibacter pomeroyi dss-3 at 2.50 a resolution 49 d1q0qa1 not modelled 9.2 31 Fold:Left-handed superhelix Superfamily:1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain Family:1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 50 d1hfia_ not modelled 9.1 50 Fold:Complement control module/SCR domain Superfamily:Complement control module/SCR domain Family:Complement control module/SCR domain 51 d1mo6a2 not modelled 8.9 14 Fold:Anti-LPS factor/recA domain Superfamily:RecA protein, C-terminal domain Family:RecA protein, C-terminal domain 52 d2fomb1 not modelled 8.8 38 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 53 c2d56A_ not modelled 8.6 57 PDB header:antibiotic Chain: A: PDB Molecule:asabf; PDBTitle: solution structure of asabf, antibacterial peptide isolated2 from a nematode, ascaris suum 54 d1dgna_ not modelled 8.6 11 Fold:DEATH domain Superfamily:DEATH domain Family:Caspase recruitment domain, CARD 55 d1u94a2 not modelled 8.5 17 Fold:Anti-LPS factor/recA domain Superfamily:RecA protein, C-terminal domain Family:RecA protein, C-terminal domain 56 d1p9sa_ not modelled 8.4 26 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral cysteine protease of trypsin fold 57 d1v86a_ not modelled 8.3 7 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 58 c1zvvA_ not modelled 8.3 29 PDB header:transcription/dna Chain: A: PDB Molecule:glucose-resistance amylase regulator; PDBTitle: crystal structure of a ccpa-crh-dna complex 59 c2auvA_ not modelled 8.3 29 PDB header:oxidoreductase Chain: A: PDB Molecule:potential nad-reducing hydrogenase subunit; PDBTitle: solution structure of hndac : a thioredoxin-like [2fe-2s]2 ferredoxin involved in the nadp-reducing hydrogenase3 complex 60 d1gx5a_ not modelled 8.2 31 Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:RNA-dependent RNA-polymerase 61 d1r0ka1 not modelled 8.1 23 Fold:Left-handed superhelix Superfamily:1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain Family:1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 62 d2ffga1 not modelled 8.0 38 Fold:YkuJ-like Superfamily:YkuJ-like Family:YkuJ-like 63 d1mdwa_ not modelled 7.9 21 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Calpain large subunit, catalytic domain (domain II) 64 c3dl8D_ not modelled 7.8 26 PDB header:protein transport Chain: D: PDB Molecule:sece; PDBTitle: structure of the complex of aquifex aeolicus secyeg and2 bacillus subtilis seca 65 d1ubea2 not modelled 7.7 14 Fold:Anti-LPS factor/recA domain Superfamily:RecA protein, C-terminal domain Family:RecA protein, C-terminal domain 66 c2fgtA_ not modelled 7.7 29 PDB header:signaling protein Chain: A: PDB Molecule:two-component system yycf/yycg regulatory PDBTitle: crystal structure of yych from bacillus subtilis 67 c3lkwA_ not modelled 7.4 38 PDB header:viral protein,hydrolase Chain: A: PDB Molecule:fusion protein of nonstructural protein 2b and PDBTitle: crystal structure of dengue virus 1 ns2b/ns3 protease active2 site mutant 68 d2fbea1 not modelled 7.4 22 Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:SPRY domain 69 c1ct9D_ not modelled 7.4 30 PDB header:ligase Chain: D: PDB Molecule:asparagine synthetase b; PDBTitle: crystal structure of asparagine synthetase b from2 escherichia coli 70 d1nb4a_ not modelled 7.3 31 Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:RNA-dependent RNA-polymerase 71 d1befa_ not modelled 7.3 38 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 72 d1kgda_ not modelled 7.2 16 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nucleotide and nucleoside kinases 73 c2wl1A_ not modelled 7.1 44 PDB header:signaling protein Chain: A: PDB Molecule:pyrin; PDBTitle: pyrin pryspry domain 74 d1jgta2 not modelled 7.0 19 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Class II glutamine amidotransferases 75 d1mj4a_ not modelled 6.8 44 Fold:Cytochrome b5-like heme/steroid binding domain Superfamily:Cytochrome b5-like heme/steroid binding domain Family:Cytochrome b5 76 d2iwgb1 not modelled 6.7 56 Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:SPRY domain 77 d1v4sa2 not modelled 6.7 28 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase 78 c3rkoA_ not modelled 6.5 16 PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-quinone oxidoreductase subunit a; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution 79 d1mhqa_ not modelled 6.5 8 Fold:alpha-alpha superhelix Superfamily:ENTH/VHS domain Family:VHS domain 80 c3kjxD_ not modelled 6.3 19 PDB header:transcription regulator Chain: D: PDB Molecule:transcriptional regulator, laci family; PDBTitle: crystal structure of a transcriptional regulator, lacl2 family protein from silicibacter pomeroyi 81 d1u34a_ not modelled 6.3 63 Fold:Hormone receptor domain Superfamily:Hormone receptor domain Family:Hormone receptor domain 82 c3ba3A_ not modelled 6.2 12 PDB header:oxidoreductase Chain: A: PDB Molecule:pyridoxamine 5'-phosphate oxidase-like protein; PDBTitle: crystal structure of pyridoxamine 5'-phosphate oxidase-like protein2 (np_783940.1) from lactobacillus plantarum at 1.55 a resolution 83 c3fotA_ not modelled 6.2 24 PDB header:transferase Chain: A: PDB Molecule:15-o-acetyltransferase; PDBTitle: structural and functional characterization of tri3 trichothecene 15-o-2 acetyltransferase from fusarium sporotrichioides 84 c1q15A_ not modelled 6.2 20 PDB header:biosynthetic protein Chain: A: PDB Molecule:cara; PDBTitle: carbapenam synthetase 85 c3cm8B_ not modelled 6.0 30 PDB header:rna binding protein/transferase Chain: B: PDB Molecule:peptide from rna-directed rna polymerase PDBTitle: a rna polymerase subunit structure from virus 86 c2k50A_ not modelled 6.0 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:replication factor a related protein; PDBTitle: solution nmr structure of the replication factor a related2 protein from methanobacterium thermoautotrophicum.3 northeast structural genomics target tr91a. 87 d1kxoa_ not modelled 6.0 8 Fold:Lipocalins Superfamily:Lipocalins Family:Retinol binding protein-like 88 c2bsjB_ not modelled 6.0 50 PDB header:chaperone Chain: B: PDB Molecule:chaperone protein syct; PDBTitle: native crystal structure of the type iii secretion2 chaperone syct from yersinia enterocolitica 89 d3c2wa2 not modelled 5.9 17 Fold:Profilin-like Superfamily:GAF domain-like Family:Phytochrome-specific domain 90 c3kb5A_ not modelled 5.8 67 PDB header:membrane protein Chain: A: PDB Molecule:tripartite motif-containing protein 72; PDBTitle: pry-spry domain of human trim72 91 d1q15a2 not modelled 5.7 20 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Class II glutamine amidotransferases 92 c3kzgB_ not modelled 5.7 8 PDB header:transport protein Chain: B: PDB Molecule:arginine 3rd transport system periplasmic binding PDBTitle: crystal structure of an arginine 3rd transport system2 periplasmic binding protein from legionella pneumophila 93 c1htrP_ not modelled 5.6 38 PDB header:aspartyl protease Chain: P: PDB Molecule:progastricsin (pro segment); PDBTitle: crystal and molecular structures of human progastricsin at 1.622 angstroms resolution 94 d1scjb_ not modelled 5.6 16 Fold:Ferredoxin-like Superfamily:Protease propeptides/inhibitors Family:Subtilase propeptides/inhibitors 95 c1gxsC_ not modelled 5.5 17 PDB header:lyase Chain: C: PDB Molecule:p-(s)-hydroxymandelonitrile lyase chain a; PDBTitle: crystal structure of hydroxynitrile lyase from sorghum2 bicolor in complex with inhibitor benzoic acid: a novel3 cyanogenic enzyme 96 c3jsrA_ not modelled 5.5 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:all0216 protein; PDBTitle: x-ray structure of all0216 protein from nostoc sp. pcc 7120 at the2 resolution 1.8a. northeast structural genomics consortium target3 nsr236 97 c1m1zB_ not modelled 5.5 44 PDB header:hydrolase Chain: B: PDB Molecule:beta-lactam synthetase; PDBTitle: beta-lactam synthetase apo enzyme 98 c3fcnA_ not modelled 5.4 36 PDB header:unknown function Chain: A: PDB Molecule:an alpha-helical protein of unknown function (pfam01724); PDBTitle: crystal structure of an alpha-helical protein of unknown function2 (rru_a3208) from rhodospirillum rubrum atcc 11170 at 1.45 a3 resolution 99 d1oqja_ not modelled 5.1 14 Fold:SAND domain-like Superfamily:SAND domain-like Family:SAND domain