PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c1bcrA_

Fold library id	PDB Header	Molecule	Title
c1bcrA_	PDB header: complex (serine protease/inhibitor)	Chain: A: PDB Molecule: serine carboxypeptidase ii;	PDBTitle: complex of the wheat serine carboxypeptidase, cpdw-ii, with2 the microbial peptide aldehyde inhibitor, antipain, and3 arginine at room temperature

Links to external resources
Added to library: Tue Mar 16 13:25:16 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence H A A D R I A R L P G Q P A V D F D M Y S G Y I T V D E G A G R S L F Y L L Q E A P E D A Q P A P L V L W L N G G P G C S S V A Y G A S E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G B
T T
S S
T T T T
G G G
S
T T T
T T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L G A F R V K P R G A G L V L N E Y R W N K V A N V L F L D S P A G V G F S Y T N T S S D I Y T S G D N R T A H D S Y A F L A K W F E R F P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
G G G
T T
G G G T S
S T T S T T
B
S S G G G G G T
S G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence H Y K Y R D F Y I A G E S Y A G H Y V P E L S Q L V H R S K N P V I N L K G F M V G N G L I D D Y H D Y V G T F E F W W N H G I V S D D T Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G T T
T T T
S S
S
T T T
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . .

Sequence R R L K E A C L H D S F I H P S P A C D A A T D V A T A E Q G N I D M Y S L Y T P V C N R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S S
S S
T T S T T S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	A	A	D	R	I	A	R	L	P	G	Q	P	A	V	D	F	D	M	Y	S	G	Y	I	T	V	D	E	G	A	G	R	S	L	F	Y	L	L	Q	E	A	P	E	D	A	Q	P	A	P	L	V	L	W	L	N	G	G	P	G	C	S	S	V	A	Y	G	A	S	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	B					T	T					S	S											T	T	T	T												G	G	G		S										T	T	T			T	T	T	T					T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	G	A	F	R	V	K	P	R	G	A	G	L	V	L	N	E	Y	R	W	N	K	V	A	N	V	L	F	L	D	S	P	A	G	V	G	F	S	Y	T	N	T	S	S	D	I	Y	T	S	G	D	N	R	T	A	H	D	S	Y	A	F	L	A	K	W	F	E	R	F	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S					G	G	G							T	T		G	G	G	T	S								S	T	T	S	T	T		B		S	S	G	G	G	G	G	T																					S	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	Y	K	Y	R	D	F	Y	I	A	G	E	S	Y	A	G	H	Y	V	P	E	L	S	Q	L	V	H	R	S	K	N	P	V	I	N	L	K	G	F	M	V	G	N	G	L	I	D	D	Y	H	D	Y	V	G	T	F	E	F	W	W	N	H	G	I	V	S	D	D	T	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	T	T									T	T																T		S	S										S																		T	T	T		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Sequence	R	R	L	K	E	A	C	L	H	D	S	F	I	H	P	S	P	A	C	D	A	A	T	D	V	A	T	A	E	Q	G	N	I	D	M	Y	S	L	Y	T	P	V	C	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S		S	S	S																		S	S		T	T	S	T	T	S