Email l.a.kelley@imperial.ac.uk Description Q06065 Date Thu Jan 5 12:33:23 GMT 2012 Unique Job ID 11788e3ddcd53b11

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1ny5A_ 100.0 43 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state 2 c3dzdA_ 100.0 43 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state 3 c2c99A_ 100.0 45 PDB header:transcription regulation Chain: A: PDB Molecule:psp operon transcriptional activator; PDBTitle: structural basis of the nucleotide driven conformational2 changes in the aaa domain of transcription activator pspf 4 d1ny5a2 100.0 50 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 5 c1ojlF_ 100.0 55 PDB header:response regulator Chain: F: PDB Molecule:transcriptional regulatory protein zrar; PDBTitle: crystal structure of a sigma54-activator suggests the2 mechanism for the conformational switch necessary for3 sigma54 binding 6 c3co5B_ 99.9 26 PDB header:transcription regulator Chain: B: PDB Molecule:putative two-component system transcriptional response PDBTitle: crystal structure of sigma-54 interaction domain of putative2 transcriptional response regulator from neisseria gonorrhoeae 7 c2ayxA_ 99.9 31 PDB header:transferase Chain: A: PDB Molecule:sensor kinase protein rcsc; PDBTitle: solution structure of the e.coli rcsc c-terminus (residues2 700-949) containing linker region and phosphoreceiver3 domain 8 c1w25B_ 99.9 29 PDB header:signaling protein Chain: B: PDB Molecule:stalked-cell differentiation controlling protein; PDBTitle: response regulator pled in complex with c-digmp 9 c3eq2A_ 99.9 31 PDB header:signaling protein Chain: A: PDB Molecule:probable two-component response regulator; PDBTitle: structure of hexagonal crystal form of pseudomonas2 aeruginosa rssb 10 d1qkka_ 99.9 29 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 11 c2rjnA_ 99.9 22 PDB header:hydrolase Chain: A: PDB Molecule:response regulator receiver:metal-dependent PDBTitle: crystal structure of an uncharacterized protein q2bku2 from2 neptuniibacter caesariensis 12 c2qr3A_ 99.9 27 PDB header:transcription Chain: A: PDB Molecule:two-component system response regulator; PDBTitle: crystal structure of the n-terminal signal receiver domain of two-2 component system response regulator from bacteroides fragilis 13 d1ny5a1 99.9 29 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 14 c2jrlA_ 99.9 28 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: solution structure of the beryllofluoride-activated ntrc4 receiver2 domain dimer 15 d1ys7a2 99.9 35 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 16 d1dbwa_ 99.9 31 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 17 c3cfyA_ 99.9 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative luxo repressor protein; PDBTitle: crystal structure of signal receiver domain of putative luxo2 repressor protein from vibrio parahaemolyticus 18 c3jteA_ 99.9 26 PDB header:protein binding Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator receiver domain2 protein from clostridium thermocellum 19 d1w25a1 99.9 30 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 20 c3breA_ 99.9 21 PDB header:signaling protein Chain: A: PDB Molecule:probable two-component response regulator; PDBTitle: crystal structure of p.aeruginosa pa3702 21 d1peya_ not modelled 99.9 41 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 22 d1mvoa_ not modelled 99.9 33 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 23 c3crnA_ not modelled 99.9 25 PDB header:signaling protein Chain: A: PDB Molecule:response regulator receiver domain protein, chey-like; PDBTitle: crystal structure of response regulator receiver domain protein (chey-2 like) from methanospirillum hungatei jf-1 24 d2a9pa1 not modelled 99.8 35 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 25 c3r0jA_ not modelled 99.8 29 PDB header:dna binding protein Chain: A: PDB Molecule:possible two component system response transcriptional PDBTitle: structure of phop from mycobacterium tuberculosis 26 d2pl1a1 not modelled 99.8 28 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 27 d2ayxa1 not modelled 99.8 31 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 28 d1yioa2 not modelled 99.8 27 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 29 c2zwmA_ not modelled 99.8 36 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein yycf; PDBTitle: crystal structure of yycf receiver domain from bacillus2 subtilis 30 d1krwa_ not modelled 99.8 41 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 31 c3i5aA_ not modelled 99.8 25 PDB header:signaling protein Chain: A: PDB Molecule:response regulator/ggdef domain protein; PDBTitle: crystal structure of full-length wpsr from pseudomonas syringae 32 d1kgsa2 not modelled 99.8 34 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 33 c3hv2B_ not modelled 99.8 28 PDB header:signaling protein Chain: B: PDB Molecule:response regulator/hd domain protein; PDBTitle: crystal structure of signal receiver domain of hd domain-2 containing protein from pseudomonas fluorescens pf-5 34 c3b2nA_ not modelled 99.8 26 PDB header:transcription Chain: A: PDB Molecule:uncharacterized protein q99uf4; PDBTitle: crystal structure of dna-binding response regulator, luxr family, from2 staphylococcus aureus 35 c3c3mA_ not modelled 99.8 24 PDB header:signaling protein Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of the n-terminal domain of response regulator2 receiver protein from methanoculleus marisnigri jr1 36 c3gt7A_ not modelled 99.8 31 PDB header:hydrolase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of signal receiver domain of signal2 transduction histidine kinase from syntrophus3 aciditrophicus 37 c3nhzA_ not modelled 99.8 35 PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra 38 d1u0sy_ not modelled 99.8 36 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 39 c1a2oB_ not modelled 99.8 22 PDB header:bacterial chemotaxis Chain: B: PDB Molecule:cheb methylesterase; PDBTitle: structural basis for methylesterase cheb regulation by a2 phosphorylation-activated domain 40 d1zesa1 not modelled 99.8 31 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 41 c2jk1A_ not modelled 99.8 23 PDB header:dna-binding Chain: A: PDB Molecule:hydrogenase transcriptional regulatory protein hupr1; PDBTitle: crystal structure of the wild-type hupr receiver domain 42 c3kcnA_ not modelled 99.8 22 PDB header:lyase Chain: A: PDB Molecule:adenylate cyclase homolog; PDBTitle: the crystal structure of adenylate cyclase from2 rhodopirellula baltica 43 d1zh2a1 not modelled 99.8 35 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 44 d1jbea_ not modelled 99.8 32 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 45 c3rqiA_ not modelled 99.8 20 PDB header:transcription Chain: A: PDB Molecule:response regulator protein; PDBTitle: crystal structure of a response regulator protein from burkholderia2 pseudomallei with a phosphorylated aspartic acid, calcium ion and3 citrate 46 c3cu5B_ not modelled 99.8 31 PDB header:transcription regulator Chain: B: PDB Molecule:two component transcriptional regulator, arac family; PDBTitle: crystal structure of a two component transcriptional regulator arac2 from clostridium phytofermentans isdg 47 c1ys7B_ not modelled 99.8 33 PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulatory protein prra; PDBTitle: crystal structure of the response regulator protein prra comlexed with2 mg2+ 48 d1s8na_ not modelled 99.8 29 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 49 c2qzjC_ not modelled 99.8 26 PDB header:transcription Chain: C: PDB Molecule:two-component response regulator; PDBTitle: crystal structure of a two-component response regulator from2 clostridium difficile 50 c3lteH_ not modelled 99.8 26 PDB header:transcription Chain: H: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator (signal receiver domain) from2 bermanella marisrubri 51 c3t6kB_ not modelled 99.8 31 PDB header:signaling protein Chain: B: PDB Molecule:response regulator receiver; PDBTitle: crystal structure of a hypothetical response regulator (caur_3799)2 from chloroflexus aurantiacus j-10-fl at 1.86 a resolution 52 c2zayA_ not modelled 99.8 23 PDB header:signaling protein Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator from desulfuromonas2 acetoxidans 53 c3hdgE_ not modelled 99.8 27 PDB header:structural genomics, unknown function Chain: E: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the n-terminal domain of an2 uncharacterized protein (ws1339) from wolinella3 succinogenes 54 c3cg0A_ not modelled 99.8 26 PDB header:lyase Chain: A: PDB Molecule:response regulator receiver modulated diguanylate cyclase PDBTitle: crystal structure of signal receiver domain of modulated diguanylate2 cyclase from desulfovibrio desulfuricans g20, an example of alternate3 folding 55 c3hdvB_ not modelled 99.8 23 PDB header:transcription regulator Chain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator receiver protein from2 pseudomonas putida 56 d1zgza1 not modelled 99.8 27 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 57 d1xhfa1 not modelled 99.8 26 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 58 d1p6qa_ not modelled 99.8 25 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 59 c3eulB_ not modelled 99.8 32 PDB header:transcription Chain: B: PDB Molecule:possible nitrate/nitrite response transcriptional PDBTitle: structure of the signal receiver domain of the putative2 response regulator narl from mycobacterium tuberculosis 60 c3cz5B_ not modelled 99.8 27 PDB header:transcription regulator Chain: B: PDB Molecule:two-component response regulator, luxr family; PDBTitle: crystal structure of two-component response regulator, luxr family,2 from aurantimonas sp. si85-9a1 61 d1dz3a_ not modelled 99.8 27 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 62 d1a04a2 not modelled 99.8 24 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 63 c2qxyB_ not modelled 99.8 23 PDB header:transcription Chain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of a response regulator from thermotoga2 maritima 64 c2gwrA_ not modelled 99.8 31 PDB header:signaling protein Chain: A: PDB Molecule:dna-binding response regulator mtra; PDBTitle: crystal structure of the response regulator protein mtra from2 mycobacterium tuberculosis 65 c1kgsA_ not modelled 99.8 28 PDB header:dna binding protein Chain: A: PDB Molecule:dna binding response regulator d; PDBTitle: crystal structure at 1.50 a of an ompr/phob homolog from thermotoga2 maritima 66 c3cnbC_ not modelled 99.8 25 PDB header:dna binding protein Chain: C: PDB Molecule:dna-binding response regulator, merr family; PDBTitle: crystal structure of signal receiver domain of dna binding response2 regulator protein (merr) from colwellia psychrerythraea 34h 67 c3h1gA_ not modelled 99.8 30 PDB header:signaling protein Chain: A: PDB Molecule:chemotaxis protein chey homolog; PDBTitle: crystal structure of chey mutant t84a of helicobacter pylori 68 d1k66a_ not modelled 99.8 26 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 69 d1heya_ not modelled 99.8 28 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 70 c3a0rB_ not modelled 99.8 36 PDB header:transferase Chain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of histidine kinase thka (tm1359) in complex with2 response regulator protein trra (tm1360) 71 c3pfiB_ 99.8 15 PDB header:hydrolase Chain: B: PDB Molecule:holliday junction atp-dependent dna helicase ruvb; PDBTitle: 2.7 angstrom resolution crystal structure of a probable holliday2 junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni3 nctc 11168 in complex with adenosine-5'-diphosphate 72 c3cg4A_ not modelled 99.8 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:response regulator receiver domain protein (chey-like); PDBTitle: crystal structure of response regulator receiver domain protein (chey-2 like) from methanospirillum hungatei jf-1 73 c3khtA_ not modelled 99.8 19 PDB header:signaling protein Chain: A: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator from hahella chejuensis 74 d1p2fa2 not modelled 99.8 28 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 75 d1w25a2 not modelled 99.8 20 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 76 d2r25b1 not modelled 99.8 24 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 77 c3gl9B_ not modelled 99.8 34 PDB header:signaling protein Chain: B: PDB Molecule:response regulator; PDBTitle: the structure of a histidine kinase-response regulator2 complex sheds light into two-component signaling and3 reveals a novel cis autophosphorylation mechanism 78 c3grcD_ not modelled 99.8 22 PDB header:transferase Chain: D: PDB Molecule:sensor protein, kinase; PDBTitle: crystal structure of a sensor protein from polaromonas sp.2 js666 79 c2qv0A_ not modelled 99.8 25 PDB header:transcription Chain: A: PDB Molecule:protein mrke; PDBTitle: crystal structure of the response regulatory domain of2 protein mrke from klebsiella pneumoniae 80 d1mb3a_ not modelled 99.8 27 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 81 c3q9sA_ not modelled 99.8 30 PDB header:dna binding protein Chain: A: PDB Molecule:dna-binding response regulator; PDBTitle: crystal structure of rra(1-215) from deinococcus radiodurans 82 c3eqzB_ not modelled 99.8 23 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of a response regulator from colwellia2 psychrerythraea 83 c3t8yA_ not modelled 99.8 28 PDB header:hydrolase Chain: A: PDB Molecule:chemotaxis response regulator protein-glutamate PDBTitle: crystal structure of the response regulator domain of thermotoga2 maritima cheb 84 c1zn2A_ not modelled 99.8 27 PDB header:transcription regulator Chain: A: PDB Molecule:response regulatory protein; PDBTitle: low resolution structure of response regulator styr 85 c3hzhA_ not modelled 99.8 26 PDB header:signaling protein Chain: A: PDB Molecule:chemotaxis response regulator (chey-3); PDBTitle: crystal structure of the chex-chey-bef3-mg+2 complex from2 borrelia burgdorferi 86 c3eodA_ not modelled 99.8 34 PDB header:signaling protein Chain: A: PDB Molecule:protein hnr; PDBTitle: crystal structure of n-terminal domain of e. coli rssb 87 c1p2fA_ not modelled 99.8 26 PDB header:transcription Chain: A: PDB Molecule:response regulator; PDBTitle: crystal structure analysis of response regulator drrb, a2 thermotoga maritima ompr/phob homolog 88 d1r6bx3 not modelled 99.8 17 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 89 c2rdmB_ not modelled 99.8 23 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator receiver protein from2 sinorhizobium medicae wsm419 90 c2oqrA_ not modelled 99.8 29 PDB header:transcription,signaling protein Chain: A: PDB Molecule:sensory transduction protein regx3; PDBTitle: the structure of the response regulator regx3 from mycobacterium2 tuberculosis 91 c3hebB_ not modelled 99.8 22 PDB header:transcription regulator Chain: B: PDB Molecule:response regulator receiver domain protein (chey); PDBTitle: crystal structure of response regulator receiver domain from2 rhodospirillum rubrum 92 d1a2oa1 not modelled 99.8 24 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 93 c2hqoA_ not modelled 99.8 18 PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism 94 c3nhmA_ not modelled 99.7 25 PDB header:signaling protein Chain: A: PDB Molecule:response regulator; PDBTitle: crystal structure of a response regulator from myxococcus xanthus 95 c2qvgA_ not modelled 99.7 26 PDB header:transferase Chain: A: PDB Molecule:two component response regulator; PDBTitle: the crystal structure of a two-component response regulator2 from legionella pneumophila 96 d1i3ca_ not modelled 99.7 22 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 97 c2j48A_ not modelled 99.7 25 PDB header:transferase Chain: A: PDB Molecule:two-component sensor kinase; PDBTitle: nmr structure of the pseudo-receiver domain of the cika2 protein. 98 c3i42A_ not modelled 99.7 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:response regulator receiver domain protein (chey- PDBTitle: structure of response regulator receiver domain (chey-like)2 from methylobacillus flagellatus 99 c3f6cB_ not modelled 99.7 19 PDB header:dna binding protein Chain: B: PDB Molecule:positive transcription regulator evga; PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli 100 c3luaA_ not modelled 99.7 25 PDB header:transcription regulator Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of a signal receiver domain of two component signal2 transduction (histidine kinase) from clostridium thermocellum 101 d1dcfa_ not modelled 99.7 17 Fold:Flavodoxin-like Superfamily:CheY-like Family:Receiver domain of the ethylene receptor 102 c3snkA_ not modelled 99.7 20 PDB header:signaling protein Chain: A: PDB Molecule:response regulator chey-like protein; PDBTitle: crystal structure of a response regulator chey-like protein (mll6475)2 from mesorhizobium loti at 2.02 a resolution 103 c3ktoA_ not modelled 99.7 21 PDB header:transcription regulator Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator receiver protein2 from pseudoalteromonas atlantica 104 c3h5iA_ not modelled 99.7 29 PDB header:transcription Chain: A: PDB Molecule:response regulator/sensory box protein/ggdef PDBTitle: crystal structure of the n-terminal domain of a response2 regulator/sensory box/ggdef 3-domain protein from3 carboxydothermus hydrogenoformans 105 c3ilhA_ not modelled 99.7 22 PDB header:transcription regulator Chain: A: PDB Molecule:two component response regulator; PDBTitle: crystal structure of two component response regulator from cytophaga2 hutchinsonii 106 c3m6mF_ not modelled 99.7 28 PDB header:lyase/transferase Chain: F: PDB Molecule:sensory/regulatory protein rpfc; PDBTitle: crystal structure of rpff complexed with rec domain of rpfc 107 c2hqrA_ not modelled 99.7 14 PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism 108 c3mmnA_ not modelled 99.7 31 PDB header:transferase Chain: A: PDB Molecule:histidine kinase homolog; PDBTitle: crystal structure of the receiver domain of the histidine kinase cki12 from arabidopsis thaliana complexed with mg2+ 109 c3n0rA_ not modelled 99.7 26 PDB header:signaling protein Chain: A: PDB Molecule:response regulator; PDBTitle: structure of the phyr stress response regulator at 1.25 angstrom2 resolution 110 d2b4aa1 not modelled 99.7 17 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 111 c1qvrB_ not modelled 99.7 21 PDB header:chaperone Chain: B: PDB Molecule:clpb protein; PDBTitle: crystal structure analysis of clpb 112 c1in8A_ not modelled 99.7 14 PDB header:dna binding protein Chain: A: PDB Molecule:holliday junction dna helicase ruvb; PDBTitle: thermotoga maritima ruvb t158v 113 c1r6bX_ not modelled 99.7 17 PDB header:hydrolase Chain: X: PDB Molecule:clpa protein; PDBTitle: high resolution crystal structure of clpa 114 c3c97A_ not modelled 99.7 30 PDB header:signaling protein, transferase Chain: A: PDB Molecule:signal transduction histidine kinase; PDBTitle: crystal structure of the response regulator receiver domain2 of a signal transduction histidine kinase from aspergillus3 oryzae 115 d1k68a_ not modelled 99.7 23 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 116 c3lufB_ not modelled 99.7 16 PDB header:signaling protein Chain: B: PDB Molecule:two-component system response regulator/ggdef PDBTitle: structure of probable two-component system response2 regulator/ggdef domain protein 117 c2nt3A_ not modelled 99.7 19 PDB header:signaling protein Chain: A: PDB Molecule:response regulator homolog; PDBTitle: receiver domain from myxococcus xanthus social motility protein frzs2 (y102a mutant) 118 c3pxiB_ not modelled 99.7 17 PDB header:protein binding Chain: B: PDB Molecule:negative regulator of genetic competence clpc/mecb; PDBTitle: structure of meca108:clpc 119 d1um8a_ not modelled 99.7 18 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 120 d1qvra3 not modelled 99.7 21 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain