PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1p2fA_

Fold library id	PDB Header	Molecule	Title
c1p2fA_	PDB header: transcription	Chain: A: PDB Molecule: response regulator;	PDBTitle: crystal structure analysis of response regulator drrb, a2 thermotoga maritima ompr/phob homolog

Links to external resources
Added to library: Tue Mar 16 12:33:28 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X X W K I A V V D D D K N I L K K V S E K L Q Q L G R V K T F L T G E D F L N D E E A F H V V V L D V X L P D Y S G Y E I C R X I K E T R P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T S S
S
S S B
S S S B
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E T W V I L L T L L S D D E S V L K G F E A G A D D Y V T K P F N P E I L L A R V K R F L E R E K K G L Y D F G D L K I D A T G F T V F L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S
S T
S S S
S T T T T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G K R I H L P K K E F E I L L F L A E N A G K V V T R E K L L E T F W E D P V S P R V V D T V I K R I R K A I E D D P N R P R Y I K T I W G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T T S
S S
T
S S T T S
S S T T

. . . . . . .

Sequence V G Y X F T G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	X	W	K	I	A	V	V	D	D	D	K	N	I	L	K	K	V	S	E	K	L	Q	Q	L	G	R	V	K	T	F	L	T	G	E	D	F	L	N	D	E	E	A	F	H	V	V	V	L	D	V	X	L	P	D	Y	S	G	Y	E	I	C	R	X	I	K	E	T	R	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S													T	T	T							S	S									S			S						S	B		S	S	S	B													T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	T	W	V	I	L	L	T	L	L	S	D	D	E	S	V	L	K	G	F	E	A	G	A	D	D	Y	V	T	K	P	F	N	P	E	I	L	L	A	R	V	K	R	F	L	E	R	E	K	K	G	L	Y	D	F	G	D	L	K	I	D	A	T	G	F	T	V	F	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S							S			S											T		S					S	S																				S					T	T					T	T	T	T					T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	K	R	I	H	L	P	K	K	E	F	E	I	L	L	F	L	A	E	N	A	G	K	V	V	T	R	E	K	L	L	E	T	F	W	E	D	P	V	S	P	R	V	V	D	T	V	I	K	R	I	R	K	A	I	E	D	D	P	N	R	P	R	Y	I	K	T	I	W	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																			T	T	T	S													S	S				T																S	S	T	T	S		S	S					T	T
	.	.	.	.	.	.	.
Sequence	V	G	Y	X	F	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T