Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	I	L	F	V	G	F	L	L	M	E	I	V	M	P	Q	I	S	R	T	A	L	V	P	Y	S	A	E	Q	M	Y	Q	L	V	N	D	V	Q	S	Y	P	Q	F	L	P	G	C	T	G	S	R	I	L	E	S	T	P	G	Q	M
Secondary structure
SS confidence
Disorder		?					?	?	?	?		?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		T	A	A	V	D	V	S	K	A	G	I	S	K	T	F	T	T	R	N	Q	L	T	S	N	Q	S	I	L	M	N	L	V	D	G	P	F	K	K	L	I	G	G	W	K	F	T	P	L	S	Q	E	A	C	R	I	E	F	H	L	D
Secondary structure
SS confidence
Disorder																																																			?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Sequence		F	E	F	T	N	K	L	I	E	L	A	F	G	R	V	F	K	E	L	A	A	N	M	V	Q	A	F	T	V	R	A	K	E	V	Y	S	A	R
Secondary structure
SS confidence
Disorder																																				?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1t17 chain A Region: 14 - 157 Aligned: 143 Modelled: 144 Confidence: 100.0% Identity: 31% Fold: TBP-like Superfamily: Bet v1-like Family: oligoketide cyclase/dehydrase-like Phyre2 PDB 2d4r chain A domain 1 Region: 15 - 153 Aligned: 138 Modelled: 139 Confidence: 99.9% Identity: 16% Fold: TBP-like Superfamily: Bet v1-like Family: oligoketide cyclase/dehydrase-like Phyre2 PDB 3tfz chain B Region: 14 - 157 Aligned: 144 Modelled: 144 Confidence: 99.9% Identity: 21% PDB header:biosynthetic protein Chain: B: PDB Molecule:cyclase; PDBTitle: crystal structure of zhui aromatase/cyclase from streptomcyes sp.2 r1128 Phyre2 PDB 2kf2 chain A Region: 14 - 158 Aligned: 145 Modelled: 145 Confidence: 99.9% Identity: 11% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative polyketide cyclase; PDBTitle: solution nmr structure of of streptomyces coelicolor2 polyketide cyclase sco5315. northeast structural genomics3 consortium target rr365 Phyre2 PDB 2le1 chain A Region: 14 - 155 Aligned: 142 Modelled: 142 Confidence: 99.9% Identity: 13% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of tfu_2981 from thermobifida fusca, northeast2 structural genomics consortium target tfr85a Phyre2 PDB 3p9v chain A Region: 11 - 156 Aligned: 146 Modelled: 146 Confidence: 99.9% Identity: 19% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: high resolution crystal structure of protein maqu_3174 from2 marinobacter aquaeolei, northeast structural genomics consortium3 target mqr197 Phyre2 PDB 2pcs chain A domain 1 Region: 14 - 154 Aligned: 139 Modelled: 140 Confidence: 99.9% Identity: 10% Fold: TBP-like Superfamily: Bet v1-like Family: CoxG-like Phyre2 PDB 2rer chain A domain 1 Region: 14 - 155 Aligned: 141 Modelled: 142 Confidence: 99.9% Identity: 11% Fold: TBP-like Superfamily: Bet v1-like Family: oligoketide cyclase/dehydrase-like Phyre2 PDB 2ns9 chain A domain 1 Region: 14 - 157 Aligned: 142 Modelled: 144 Confidence: 99.9% Identity: 12% Fold: TBP-like Superfamily: Bet v1-like Family: CoxG-like Phyre2 PDB 2b79 chain A domain 1 Region: 14 - 152 Aligned: 135 Modelled: 138 Confidence: 99.8% Identity: 9% Fold: TBP-like Superfamily: Bet v1-like Family: Smu440-like Phyre2 PDB 3cnw chain A domain 1 Region: 16 - 153 Aligned: 133 Modelled: 138 Confidence: 99.8% Identity: 14% Fold: TBP-like Superfamily: Bet v1-like Family: Atu1531-like Phyre2 PDB 3p51 chain A Region: 15 - 153 Aligned: 137 Modelled: 139 Confidence: 99.8% Identity: 13% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: three-dimensional structure of protein q2y8n9_nitmu from nitrosospira2 multiformis, northeast structural genomics consortium target nmr118 Phyre2 PDB 2kcz chain A Region: 15 - 154 Aligned: 139 Modelled: 140 Confidence: 99.7% Identity: 14% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein dr_a0006; PDBTitle: solution nmr structure of the c-terminal domain of protein2 dr_a0006 from deinococcus radiodurans. northeast3 structural genomics consortium target drr147d Phyre2 PDB 3oqu chain B Region: 16 - 154 Aligned: 139 Modelled: 139 Confidence: 99.6% Identity: 11% PDB header:hormone receptor Chain: B: PDB Molecule:abscisic acid receptor pyl9; PDBTitle: crystal structure of native abscisic acid receptor pyl9 with aba Phyre2 PDB 3qtj chain A Region: 16 - 154 Aligned: 139 Modelled: 139 Confidence: 99.6% Identity: 6% PDB header:hormone receptor Chain: A: PDB Molecule:abscisic acid receptor pyl10; PDBTitle: crystal strcuture of aba receptor pyl10 (apo) Phyre2 PDB 3k90 chain C Region: 16 - 154 Aligned: 139 Modelled: 139 Confidence: 99.6% Identity: 12% PDB header:hormone receptor, hydrolase regulator Chain: C: PDB Molecule:putative uncharacterized protein; PDBTitle: the abscisic acid receptor pyr1 in complex with abscisic acid Phyre2 PDB 2qpv chain A domain 1 Region: 13 - 152 Aligned: 130 Modelled: 138 Confidence: 99.6% Identity: 10% Fold: TBP-like Superfamily: Bet v1-like Family: Atu1531-like Phyre2 PDB 2vq5 chain B Region: 16 - 149 Aligned: 134 Modelled: 134 Confidence: 99.5% Identity: 12% PDB header:lyase Chain: B: PDB Molecule:s-norcoclaurine synthase; PDBTitle: x-ray structure of norcoclaurine synthase from thalictrum2 flavum in complex with dopamine and hydroxybenzaldehyde Phyre2 PDB 3oh8 chain A Region: 16 - 143 Aligned: 127 Modelled: 128 Confidence: 99.5% Identity: 8% PDB header:isomerase Chain: A: PDB Molecule:nucleoside-diphosphate sugar epimerase (sula family); PDBTitle: crystal structure of the nucleoside-diphosphate sugar epimerase from2 corynebacterium glutamicum. northeast structural genomics consortium3 target cgr91 Phyre2 PDB 3qsz chain B Region: 14 - 155 Aligned: 141 Modelled: 142 Confidence: 99.4% Identity: 12% PDB header:unknown function Chain: B: PDB Molecule:star-related lipid transfer protein; PDBTitle: crystal structure of the star-related lipid transfer protein (fragment2 25-204) from xanthomonas axonopodis at the resolution 2.4a, northeast3 structural genomics consortium target xar342 Phyre2 1 d1t17a_ 2 d2d4ra1 3 c3tfzB_ 4 c2kf2A_ 5 c2le1A_ 6 c3p9vA_ 7 d2pcsa1 8 d2rera1 9 d2ns9a1 10 d2b79a1 11 d3cnwa1 12 c3p51A_ 13 c2kczA_ 14 c3oquB_ 15 c3qtjA_ 16 c3k90C_ 17 d2qpva1 18 c2vq5B_ 19 c3oh8A_ 20 c3qszB_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1t17a_ 100.0 31 Fold:TBP-like Superfamily:Bet v1-like Family:oligoketide cyclase/dehydrase-like 2 d2d4ra1 99.9 16 Fold:TBP-like Superfamily:Bet v1-like Family:oligoketide cyclase/dehydrase-like 3 c3tfzB_ 99.9 21 PDB header:biosynthetic protein Chain: B: PDB Molecule:cyclase; PDBTitle: crystal structure of zhui aromatase/cyclase from streptomcyes sp.2 r1128 4 c2kf2A_ 99.9 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative polyketide cyclase; PDBTitle: solution nmr structure of of streptomyces coelicolor2 polyketide cyclase sco5315. northeast structural genomics3 consortium target rr365 5 c2le1A_ 99.9 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of tfu_2981 from thermobifida fusca, northeast2 structural genomics consortium target tfr85a 6 c3p9vA_ 99.9 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: high resolution crystal structure of protein maqu_3174 from2 marinobacter aquaeolei, northeast structural genomics consortium3 target mqr197 7 d2pcsa1 99.9 10 Fold:TBP-like Superfamily:Bet v1-like Family:CoxG-like 8 d2rera1 99.9 11 Fold:TBP-like Superfamily:Bet v1-like Family:oligoketide cyclase/dehydrase-like 9 d2ns9a1 99.9 12 Fold:TBP-like Superfamily:Bet v1-like Family:CoxG-like 10 d2b79a1 99.8 9 Fold:TBP-like Superfamily:Bet v1-like Family:Smu440-like 11 d3cnwa1 99.8 14 Fold:TBP-like Superfamily:Bet v1-like Family:Atu1531-like 12 c3p51A_ 99.8 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: three-dimensional structure of protein q2y8n9_nitmu from nitrosospira2 multiformis, northeast structural genomics consortium target nmr118 13 c2kczA_ 99.7 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein dr_a0006; PDBTitle: solution nmr structure of the c-terminal domain of protein2 dr_a0006 from deinococcus radiodurans. northeast3 structural genomics consortium target drr147d 14 c3oquB_ 99.6 11 PDB header:hormone receptor Chain: B: PDB Molecule:abscisic acid receptor pyl9; PDBTitle: crystal structure of native abscisic acid receptor pyl9 with aba 15 c3qtjA_ 99.6 6 PDB header:hormone receptor Chain: A: PDB Molecule:abscisic acid receptor pyl10; PDBTitle: crystal strcuture of aba receptor pyl10 (apo) 16 c3k90C_ 99.6 12 PDB header:hormone receptor, hydrolase regulator Chain: C: PDB Molecule:putative uncharacterized protein; PDBTitle: the abscisic acid receptor pyr1 in complex with abscisic acid 17 d2qpva1 99.6 10 Fold:TBP-like Superfamily:Bet v1-like Family:Atu1531-like 18 c2vq5B_ 99.5 12 PDB header:lyase Chain: B: PDB Molecule:s-norcoclaurine synthase; PDBTitle: x-ray structure of norcoclaurine synthase from thalictrum2 flavum in complex with dopamine and hydroxybenzaldehyde 19 c3oh8A_ 99.5 8 PDB header:isomerase Chain: A: PDB Molecule:nucleoside-diphosphate sugar epimerase (sula family); PDBTitle: crystal structure of the nucleoside-diphosphate sugar epimerase from2 corynebacterium glutamicum. northeast structural genomics consortium3 target cgr91 20 c3qszB_ 99.4 12 PDB header:unknown function Chain: B: PDB Molecule:star-related lipid transfer protein; PDBTitle: crystal structure of the star-related lipid transfer protein (fragment2 25-204) from xanthomonas axonopodis at the resolution 2.4a, northeast3 structural genomics consortium target xar342 21 d1ifva_ not modelled 99.4 13 Fold:TBP-like Superfamily:Bet v1-like Family:Pathogenesis-related protein 10 (PR10)-like 22 c3klxB_ not modelled 99.4 9 PDB header:hormone receptor Chain: B: PDB Molecule:f3n23.20 protein; PDBTitle: crystal structure of native abscisic acid receptor pyl3 23 d1xfsa_ not modelled 99.3 9 Fold:TBP-like Superfamily:Bet v1-like Family:AHSA1 domain 24 d1icxa_ not modelled 99.3 12 Fold:TBP-like Superfamily:Bet v1-like Family:Pathogenesis-related protein 10 (PR10)-like 25 c2lf2A_ not modelled 99.3 9 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of the ahsa1-like protein chu_1110 from2 cytophaga hutchinsonii, northeast structural genomics consortium3 target chr152 26 c3uidA_ not modelled 99.3 12 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of protein ms6760 from mycobacterium smegmatis 27 c3c0vC_ not modelled 99.3 9 PDB header:plant protein Chain: C: PDB Molecule:cytokinin-specific binding protein; PDBTitle: crystal structure of cytokinin-specific binding protein in complex2 with cytokinin and ta6br12 28 d1xuva_ not modelled 99.3 12 Fold:TBP-like Superfamily:Bet v1-like Family:AHSA1 domain 29 c2ldkA_ not modelled 99.3 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of protein aaur_3427 from arthrobacter2 aurescens, northeast structural genomics consortium target aar96 30 c3pu2G_ not modelled 99.3 7 PDB header:structure genomics, unknown function Chain: G: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the q3j4m4_rhos4 protein from rhodobacter2 sphaeroides. northeast structural genomics consortium target rhr263. 31 c2l9pA_ not modelled 99.3 7 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of q5hli9 from staphylococcus epidermidis,2 northeast structural genomics consortium target ser147 32 c3kdiA_ not modelled 99.3 11 PDB header:hormone receptor Chain: A: PDB Molecule:putative uncharacterized protein at2g26040; PDBTitle: structure of (+)-aba bound pyl2 33 d2bk0a1 not modelled 99.3 16 Fold:TBP-like Superfamily:Bet v1-like Family:Pathogenesis-related protein 10 (PR10)-like 34 c2leqA_ not modelled 99.3 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: chemical shift assignment and solution structure of chr145 from2 cytophaga hutchinsonii, northeast structural genomics consortium3 target chr145 35 c3q64A_ not modelled 99.3 7 PDB header:structure genomics, unknown function Chain: A: PDB Molecule:mll3774 protein; PDBTitle: x-ray crystal structure of protein mll3774 from mesorhizobium loti,2 northeast structural genomics consortium target mlr405. 36 c2lghA_ not modelled 99.3 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of the ahsa1-like protein aha_2358 from2 aeromonas hydrophila refined with nh rdcs, northeast structural3 genomics consortium target ahr99. 37 c2lcgA_ not modelled 99.2 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of protein rmet_5065 from ralstonia2 metallidurans, northeast structural genomics consortium target crr115 38 c2r55B_ not modelled 99.2 15 PDB header:transport protein Chain: B: PDB Molecule:star-related lipid transfer protein 5; PDBTitle: human star-related lipid transfer protein 5 39 c2k7hA_ not modelled 99.2 14 PDB header:allergen Chain: A: PDB Molecule:stress-induced protein sam22; PDBTitle: nmr solution structure of soybean allergen gly m 4 40 c3rd6A_ not modelled 99.2 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:mll3558 protein; PDBTitle: crystal structure of mll3558 protein from rhizobium loti. northeast2 structural genomics consortium target id mlr403 41 c3p0lC_ not modelled 99.2 12 PDB header:transport protein Chain: C: PDB Molecule:steroidogenic acute regulatory protein, mitochondrial; PDBTitle: human steroidogenic acute regulatory protein 42 d1qmra_ not modelled 99.2 12 Fold:TBP-like Superfamily:Bet v1-like Family:Pathogenesis-related protein 10 (PR10)-like 43 d1z94a1 not modelled 99.2 11 Fold:TBP-like Superfamily:Bet v1-like Family:AHSA1 domain 44 d1e09a_ not modelled 99.1 16 Fold:TBP-like Superfamily:Bet v1-like Family:Pathogenesis-related protein 10 (PR10)-like 45 d1fm4a_ not modelled 99.1 15 Fold:TBP-like Superfamily:Bet v1-like Family:Pathogenesis-related protein 10 (PR10)-like 46 c3otlA_ not modelled 99.1 7 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: three-dimensional structure of the putative uncharacterized protein2 from rhizobium leguminosarum at the resolution 1.9a, northeast3 structural genomics consortium target rlr261 47 d2il5a1 not modelled 99.1 8 Fold:TBP-like Superfamily:Bet v1-like Family:AHSA1 domain 48 c3q63F_ not modelled 99.1 5 PDB header:structure genomics, unknown function Chain: F: PDB Molecule:mll2253 protein; PDBTitle: x-ray crystal structure of protein mll2253 from mesorhizobium loti,2 northeast structural genomics consortium target mlr404. 49 c2l8oA_ not modelled 99.1 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of chr148 from cytophaga hutchinsonii, northeast2 structural genomics consortium target chr148 50 d1xdfa1 not modelled 99.1 15 Fold:TBP-like Superfamily:Bet v1-like Family:Pathogenesis-related protein 10 (PR10)-like 51 c2i9yA_ not modelled 99.1 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:major latex protein-like protein 28 or mlp-like PDBTitle: solution structure of arabidopsis thaliana protein2 at1g70830, a member of the major latex protein family 52 d1em2a_ not modelled 99.1 16 Fold:TBP-like Superfamily:Bet v1-like Family:STAR domain 53 d1xn6a_ not modelled 99.1 6 Fold:TBP-like Superfamily:Bet v1-like Family:AHSA1 domain 54 d1txca1 not modelled 99.0 15 Fold:TBP-like Superfamily:Bet v1-like Family:Pathogenesis-related protein 10 (PR10)-like 55 d1ln1a_ not modelled 99.0 6 Fold:TBP-like Superfamily:Bet v1-like Family:STAR domain 56 c1jssB_ not modelled 99.0 9 PDB header:lipid binding protein Chain: B: PDB Molecule:cholesterol-regulated start protein 4; PDBTitle: crystal structure of the mus musculus cholesterol-regulated2 start protein 4 (stard4). 57 d1jssa_ not modelled 99.0 9 Fold:TBP-like Superfamily:Bet v1-like Family:STAR domain 58 c2kewA_ not modelled 99.0 5 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein yndb; PDBTitle: the solution structure of bacillus subtilis sr211 start domain by nmr2 spectroscopy 59 d1xn5a_ not modelled 98.9 5 Fold:TBP-like Superfamily:Bet v1-like Family:AHSA1 domain 60 d1zxfa1 not modelled 98.9 11 Fold:TBP-like Superfamily:Bet v1-like Family:AHSA1 domain 61 c2lakA_ not modelled 98.9 11 PDB header:structure genomics, unknown function Chain: A: PDB Molecule:ahsa1-like protein rhe_ch02687; PDBTitle: solution nmr structure of the ahsa1-like protein rhe_ch02687 (1-152)2 from rhizobium etli, northeast structural genomics consortium target3 rer242 62 c2nn5A_ not modelled 98.9 7 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ef_2215; PDBTitle: structure of conserved protein of unknown function ef2215 from2 enterococcus faecalis 63 c3ie5A_ not modelled 98.9 11 PDB header:plant protein, biosynthetic protein Chain: A: PDB Molecule:phenolic oxidative coupling protein hyp-1; PDBTitle: crystal structure of hyp-1 protein from hypericum perforatum2 (st john's wort) involved in hypericin biosynthesis 64 c3q6aH_ not modelled 98.8 15 PDB header:structure genomics, unknown function Chain: H: PDB Molecule:uncharacterized protein; PDBTitle: x-ray crystal structure of the protein ssp2350 from staphylococcus2 saprophyticus, northeast structural genomics consortium target syr116 65 d2nn5a1 not modelled 98.8 6 Fold:TBP-like Superfamily:Bet v1-like Family:AHSA1 domain 66 d3elia1 not modelled 98.8 11 Fold:TBP-like Superfamily:Bet v1-like Family:AHSA1 domain 67 c2e3rB_ not modelled 98.7 12 PDB header:lipid transport Chain: B: PDB Molecule:lipid-transfer protein cert; PDBTitle: crystal structure of cert start domain in complex with c18-2 ceramide (p1) 68 c3fo5A_ not modelled 98.7 12 PDB header:lipid transport Chain: A: PDB Molecule:thioesterase, adipose associated, isoform bfit2; PDBTitle: human start domain of acyl-coenzyme a thioesterase 11 (acot11) 69 d2k5ga1 not modelled 98.6 11 Fold:TBP-like Superfamily:Bet v1-like Family:AHSA1 domain 70 c3ni8A_ not modelled 98.5 9 PDB header:unknown function Chain: A: PDB Molecule:pfc0360w protein; PDBTitle: crystal structure of pfc0360w, an hsp90 activator from plasmodium2 falciparum 71 d1x53a1 not modelled 98.3 15 Fold:TBP-like Superfamily:Bet v1-like Family:AHSA1 domain 72 d2psoa1 not modelled 98.2 9 Fold:TBP-like Superfamily:Bet v1-like Family:STAR domain 73 c2psoC_ not modelled 97.0 12 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:star-related lipid transfer protein 13; PDBTitle: human stard13 (dlc2) lipid transfer and protein localization domain 74 d2ffsa1 not modelled 96.4 12 Fold:TBP-like Superfamily:Bet v1-like Family:PA1206-like 75 d1vjha_ not modelled 94.8 12 Fold:TBP-like Superfamily:Bet v1-like Family:Pathogenesis-related protein 10 (PR10)-like 76 c2lioA_ not modelled 75.8 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of bfr322 from bacteroides fragilis, northeast2 structural genomics consortium target bfr322 77 c2ejxA_ not modelled 48.2 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:st0812; PDBTitle: crystal structure of the hypothetical protein st0812 from2 sulfolobus tokodaii 78 c3nqnB_ not modelled 43.5 7 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a protein with unknown function. (dr_2006) from2 deinococcus radiodurans at 1.88 a resolution 79 c2lafA_ not modelled 25.6 9 PDB header:membrane protein Chain: A: PDB Molecule:lipoprotein 34; PDBTitle: nmr solution structure of the n-terminal domain of the e. coli2 lipoprotein bamc 80 d1hg7a_ not modelled 7.1 26 Fold:beta-clip Superfamily:AFP III-like domain Family:AFP III-like domain 81 c2dezA_ not modelled 5.6 18 PDB header:neuropeptide Chain: A: PDB Molecule:peptide yy; PDBTitle: structure of human pyy 82 c1tz5A_ not modelled 5.5 24 PDB header:hormone/growth factor Chain: A: PDB Molecule:chimera of pancreatic hormone and neuropeptide y; PDBTitle: [pnpy19-23]-hpp bound to dpc micelles 83 d1j27a_ not modelled 5.5 20 Fold:Ferredoxin-like Superfamily:Hypothetical protein TT1725 Family:Hypothetical protein TT1725 84 d1ucsa_ not modelled 5.1 19 Fold:beta-clip Superfamily:AFP III-like domain Family:AFP III-like domain

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0