Secondary structure and disorder prediction

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Sequence		M	E	F	H	E	N	R	A	K	A	P	F	I	G	L	V	Q	L	W	Q	A	V	R	R	W	R	R	Q	M	Q	T	R	R	V	L	Q	Q	M	S	D	E	R	L	K	D	I	G	L	R	R	E	D	V	E
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?																																									?	?		?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 3i3f chain B Region: 27 - 53 Aligned: 26 Modelled: 27 Confidence: 40.8% Identity: 15% PDB header:unknown function Chain: B: PDB Molecule:hypothetical protein; PDBTitle: hypothetical protein from giardia lamblia gl50803_14299 Phyre2 PDB 3idw chain A Region: 34 - 53 Aligned: 20 Modelled: 20 Confidence: 40.7% Identity: 25% PDB header:endocytosis Chain: A: PDB Molecule:actin cytoskeleton-regulatory complex protein sla1; PDBTitle: crystal structure of sla1 homology domain 2 Phyre2 PDB 2rhf chain A Region: 17 - 46 Aligned: 30 Modelled: 30 Confidence: 38.1% Identity: 20% PDB header:hydrolase Chain: A: PDB Molecule:dna helicase recq; PDBTitle: d. radiodurans recq hrdc domain 3 Phyre2 PDB 1oxj chain A Region: 35 - 52 Aligned: 18 Modelled: 18 Confidence: 26.6% Identity: 11% PDB header:rna binding protein Chain: A: PDB Molecule:rna-binding protein smaug; PDBTitle: crystal structure of the smaug rna binding domain Phyre2 PDB 2ewc chain A domain 1 Region: 28 - 53 Aligned: 25 Modelled: 26 Confidence: 22.8% Identity: 24% Fold: Bacillus chorismate mutase-like Superfamily: YjgF-like Family: YjgF/L-PSP Phyre2 PDB 1oxj chain A domain 1 Region: 33 - 52 Aligned: 20 Modelled: 20 Confidence: 19.8% Identity: 10% Fold: SAM domain-like Superfamily: SAM/Pointed domain Family: SAM (sterile alpha motif) domain Phyre2 PDB 2e1f chain A domain 1 Region: 18 - 46 Aligned: 29 Modelled: 29 Confidence: 19.2% Identity: 14% Fold: SAM domain-like Superfamily: HRDC-like Family: HRDC domain from helicases Phyre2 PDB 3kjj chain L Region: 27 - 53 Aligned: 26 Modelled: 27 Confidence: 18.3% Identity: 35% PDB header:unknown function Chain: L: PDB Molecule:nmb1025 protein; PDBTitle: crystal structure of nmb1025, a member of yjgf protein family, from2 neisseria meningitidis (hexagonal crystal form) Phyre2 PDB 3k1r chain B Region: 33 - 52 Aligned: 20 Modelled: 20 Confidence: 18.2% Identity: 25% PDB header:structural protein Chain: B: PDB Molecule:usher syndrome type-1g protein; PDBTitle: structure of harmonin npdz1 in complex with the sam-pbm of2 sans Phyre2 PDB 2of5 chain A Region: 17 - 53 Aligned: 36 Modelled: 37 Confidence: 17.9% Identity: 19% PDB header:apoptosis Chain: A: PDB Molecule:death domain-containing protein cradd; PDBTitle: oligomeric death domain complex Phyre2 PDB 3lyb chain C Region: 27 - 53 Aligned: 26 Modelled: 27 Confidence: 17.2% Identity: 23% PDB header:hydrolase Chain: C: PDB Molecule:putative endoribonuclease; PDBTitle: structure of putative endoribonuclease(kp1_3112) from2 klebsiella pneumoniae Phyre2 PDB 2nv2 chain U Region: 21 - 43 Aligned: 23 Modelled: 23 Confidence: 15.7% Identity: 35% PDB header:lyase/transferase Chain: U: PDB Molecule:pyridoxal biosynthesis lyase pdxs; PDBTitle: structure of the plp synthase complex pdx1/2 (yaad/e) from bacillus2 subtilis Phyre2 PDB 2zbt chain B Region: 21 - 43 Aligned: 23 Modelled: 23 Confidence: 15.6% Identity: 30% PDB header:lyase Chain: B: PDB Molecule:pyridoxal biosynthesis lyase pdxs; PDBTitle: crystal structure of pyridoxine biosynthesis protein from thermus2 thermophilus hb8 Phyre2 PDB 3oq9 chain C Region: 17 - 49 Aligned: 32 Modelled: 33 Confidence: 13.9% Identity: 22% PDB header:apoptosis Chain: C: PDB Molecule:tumor necrosis factor receptor superfamily member 6; PDBTitle: structure of the fas/fadd death domain assembly Phyre2 PDB 1ow5 chain A Region: 33 - 49 Aligned: 17 Modelled: 17 Confidence: 13.8% Identity: 12% PDB header:transferase Chain: A: PDB Molecule:serine/threonine-protein kinase ste11; PDBTitle: nmr structure of the saccharomyces cerevisiae sam (sterile2 alpha motif) domain Phyre2 PDB 1ow5 chain A Region: 33 - 49 Aligned: 17 Modelled: 17 Confidence: 13.8% Identity: 12% Fold: SAM domain-like Superfamily: SAM/Pointed domain Family: SAM (sterile alpha motif) domain Phyre2 PDB 1oni chain A Region: 27 - 53 Aligned: 26 Modelled: 27 Confidence: 13.3% Identity: 27% Fold: Bacillus chorismate mutase-like Superfamily: YjgF-like Family: YjgF/L-PSP Phyre2 PDB 2cvl chain A domain 1 Region: 27 - 53 Aligned: 26 Modelled: 27 Confidence: 13.2% Identity: 27% Fold: Bacillus chorismate mutase-like Superfamily: YjgF-like Family: YjgF/L-PSP Phyre2 PDB 1d8b chain A Region: 18 - 46 Aligned: 29 Modelled: 29 Confidence: 13.2% Identity: 24% Fold: SAM domain-like Superfamily: HRDC-like Family: HRDC domain from helicases Phyre2 PDB 3bs7 chain A Region: 31 - 49 Aligned: 19 Modelled: 19 Confidence: 12.9% Identity: 32% PDB header:signaling protein Chain: A: PDB Molecule:protein aveugle; PDBTitle: crystal structure of the sterile alpha motif (sam) domain2 of hyphen/aveugle Phyre2 1 c3i3fB_ 2 c3idwA_ 3 c2rhfA_ 4 c1oxjA_ 5 d2ewca1 6 d1oxja1 7 d2e1fa1 8 c3kjjL_ 9 c3k1rB_ 10 c2of5A_ 11 c3lybC_ 12 c2nv2U_ 13 c2zbtB_ 14 c3oq9C_ 15 c1ow5A_ 16 d1ow5a_ 17 d1onia_ 18 d2cvla1 19 d1d8ba_ 20 c3bs7A_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3i3fB_ 40.8 15 PDB header:unknown function Chain: B: PDB Molecule:hypothetical protein; PDBTitle: hypothetical protein from giardia lamblia gl50803_14299 2 c3idwA_ 40.7 25 PDB header:endocytosis Chain: A: PDB Molecule:actin cytoskeleton-regulatory complex protein sla1; PDBTitle: crystal structure of sla1 homology domain 2 3 c2rhfA_ 38.1 20 PDB header:hydrolase Chain: A: PDB Molecule:dna helicase recq; PDBTitle: d. radiodurans recq hrdc domain 3 4 c1oxjA_ 26.6 11 PDB header:rna binding protein Chain: A: PDB Molecule:rna-binding protein smaug; PDBTitle: crystal structure of the smaug rna binding domain 5 d2ewca1 22.8 24 Fold:Bacillus chorismate mutase-like Superfamily:YjgF-like Family:YjgF/L-PSP 6 d1oxja1 19.8 10 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 7 d2e1fa1 19.2 14 Fold:SAM domain-like Superfamily:HRDC-like Family:HRDC domain from helicases 8 c3kjjL_ 18.3 35 PDB header:unknown function Chain: L: PDB Molecule:nmb1025 protein; PDBTitle: crystal structure of nmb1025, a member of yjgf protein family, from2 neisseria meningitidis (hexagonal crystal form) 9 c3k1rB_ 18.2 25 PDB header:structural protein Chain: B: PDB Molecule:usher syndrome type-1g protein; PDBTitle: structure of harmonin npdz1 in complex with the sam-pbm of2 sans 10 c2of5A_ 17.9 19 PDB header:apoptosis Chain: A: PDB Molecule:death domain-containing protein cradd; PDBTitle: oligomeric death domain complex 11 c3lybC_ 17.2 23 PDB header:hydrolase Chain: C: PDB Molecule:putative endoribonuclease; PDBTitle: structure of putative endoribonuclease(kp1_3112) from2 klebsiella pneumoniae 12 c2nv2U_ 15.7 35 PDB header:lyase/transferase Chain: U: PDB Molecule:pyridoxal biosynthesis lyase pdxs; PDBTitle: structure of the plp synthase complex pdx1/2 (yaad/e) from bacillus2 subtilis 13 c2zbtB_ 15.6 30 PDB header:lyase Chain: B: PDB Molecule:pyridoxal biosynthesis lyase pdxs; PDBTitle: crystal structure of pyridoxine biosynthesis protein from thermus2 thermophilus hb8 14 c3oq9C_ 13.9 22 PDB header:apoptosis Chain: C: PDB Molecule:tumor necrosis factor receptor superfamily member 6; PDBTitle: structure of the fas/fadd death domain assembly 15 c1ow5A_ 13.8 12 PDB header:transferase Chain: A: PDB Molecule:serine/threonine-protein kinase ste11; PDBTitle: nmr structure of the saccharomyces cerevisiae sam (sterile2 alpha motif) domain 16 d1ow5a_ 13.8 12 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 17 d1onia_ 13.3 27 Fold:Bacillus chorismate mutase-like Superfamily:YjgF-like Family:YjgF/L-PSP 18 d2cvla1 13.2 27 Fold:Bacillus chorismate mutase-like Superfamily:YjgF-like Family:YjgF/L-PSP 19 d1d8ba_ 13.2 24 Fold:SAM domain-like Superfamily:HRDC-like Family:HRDC domain from helicases 20 c3bs7A_ 12.9 32 PDB header:signaling protein Chain: A: PDB Molecule:protein aveugle; PDBTitle: crystal structure of the sterile alpha motif (sam) domain2 of hyphen/aveugle 21 c3bs5A_ not modelled 12.7 29 PDB header:signaling protein/membrane protein Chain: A: PDB Molecule:protein aveugle; PDBTitle: crystal structure of hcnk2-sam/dhyp-sam complex 22 c2eanA_ not modelled 11.3 24 PDB header:signaling protein Chain: A: PDB Molecule:connector enhancer of kinase suppressor of ras 2; PDBTitle: solution structure of the n-terminal sam-domain of human2 kiaa0902 protein (connector enhancer of kinase suppressor3 of ras 2) 23 d1hmja_ not modelled 11.2 33 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 24 d1qrva_ not modelled 11.1 16 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 25 d3cx5g1 not modelled 10.8 28 Fold:14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Superfamily:14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Family:14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 26 c2eseA_ not modelled 10.1 29 PDB header:protein/rna complex Chain: A: PDB Molecule:vts1p; PDBTitle: structure of the sam domain of vts1p in complex with rna 27 c3bq7A_ not modelled 10.0 29 PDB header:transferase Chain: A: PDB Molecule:diacylglycerol kinase delta; PDBTitle: sam domain of diacylglycerol kinase delta1 (e35g) 28 c2fe9A_ not modelled 9.9 31 PDB header:rna binding protein Chain: A: PDB Molecule:protein vts1; PDBTitle: solution structure of the vts1 sam domain in the presence2 of rna 29 c2bzwB_ not modelled 9.6 50 PDB header:transcription Chain: B: PDB Molecule:bcl2-antagonist of cell death; PDBTitle: the crystal structure of bcl-xl in complex with full-length2 bad 30 c3r0pB_ not modelled 9.6 15 PDB header:hydrolase Chain: B: PDB Molecule:l-psp putative endoribonuclease; PDBTitle: crystal structure of l-psp putative endoribonuclease from uncultured2 organism 31 d1ucva_ not modelled 9.0 12 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 32 d1kw4a_ not modelled 9.0 13 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 33 d1ddfa_ not modelled 8.2 22 Fold:DEATH domain Superfamily:DEATH domain Family:DEATH domain, DD 34 c2kg5A_ not modelled 8.2 24 PDB header:signaling protein Chain: A: PDB Molecule:arf-gap, rho-gap domain, ank repeat and ph PDBTitle: nmr solution structure of arap3-sam 35 c3quwA_ not modelled 8.1 12 PDB header:protein binding Chain: A: PDB Molecule:protein mmf1; PDBTitle: crystal structure of yeast mmf1 36 c2eaoA_ not modelled 8.0 35 PDB header:signaling protein, transferase Chain: A: PDB Molecule:ephrin type-b receptor 1; PDBTitle: solution structure of the c-terminal sam-domain of mouse2 ephrin type-b receptor 1 precursor (ec 2.7.1.112) 37 c3lmeE_ not modelled 7.9 19 PDB header:translation Chain: E: PDB Molecule:possible translation initiation inhibitor; PDBTitle: structure of probable translation initiation inhibitor from2 (rpa2473) from rhodopseudomonas palustris 38 d1hsma_ not modelled 7.7 21 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 39 c3i7tA_ not modelled 7.7 31 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of rv2704, a member of highly conserved2 yjgf/yer057c/uk114 family, from mycobacterium tuberculosis 40 d2d59a1 not modelled 7.4 27 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:CoA-binding domain 41 c2hueB_ not modelled 7.2 56 PDB header:dna binding protein Chain: B: PDB Molecule:histone h3; PDBTitle: structure of the h3-h4 chaperone asf1 bound to histones h3 and h4 42 c3nquA_ not modelled 7.0 44 PDB header:dna binding protein Chain: A: PDB Molecule:histone h3-like centromeric protein a; PDBTitle: crystal structure of partially trypsinized (cenp-a/h4)2 heterotetramer 43 c2qkqA_ not modelled 6.9 35 PDB header:transferase Chain: A: PDB Molecule:ephrin type-b receptor 4; PDBTitle: structure of the sam domain of human ephrin type-b receptor2 4 44 d1eika_ not modelled 6.9 40 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 45 d1ui0a_ not modelled 6.8 32 Fold:Uracil-DNA glycosylase-like Superfamily:Uracil-DNA glycosylase-like Family:Mug-like 46 d1v38a_ not modelled 6.7 12 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 47 d1ulqa1 not modelled 6.7 27 Fold:Thiolase-like Superfamily:Thiolase-like Family:Thiolase-related 48 c1g5jB_ not modelled 6.7 50 PDB header:apoptosis Chain: B: PDB Molecule:bad protein; PDBTitle: complex of bcl-xl with peptide from bad 49 d1o4va_ not modelled 6.7 29 Fold:Flavodoxin-like Superfamily:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) Family:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 50 d1sgga_ not modelled 6.6 27 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 51 c2yfwC_ not modelled 6.5 44 PDB header:cell cycle Chain: C: PDB Molecule:histone h3-like centromeric protein cse4; PDBTitle: heterotetramer structure of kluyveromyces lactis cse4,h4 52 d2a1ja1 not modelled 6.4 33 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like 53 d1w7pd1 not modelled 6.4 33 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Vacuolar sorting protein domain 54 c3k12F_ not modelled 6.3 38 PDB header:structural genomics, unknown function Chain: F: PDB Molecule:uncharacterized protein a6v7t0; PDBTitle: crystal structure of an uncharacterized protein a6v7t0 from2 pseudomonas aeruginosa 55 d1dzfa2 not modelled 6.3 33 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 56 c3kowH_ not modelled 6.1 47 PDB header:metal binding protein Chain: H: PDB Molecule:d-ornithine aminomutase s component; PDBTitle: crystal structure of ornithine 4,5 aminomutase backsoaked complex 57 d1dhsa_ not modelled 6.1 21 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Deoxyhypusine synthase, DHS 58 c2a8vA_ not modelled 6.0 27 PDB header:protein/rna Chain: A: PDB Molecule:rna binding domain of rho transcription PDBTitle: rho transcription termination factor/rna complex 59 d1x40a1 not modelled 6.0 27 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 60 d1k99a_ not modelled 6.0 19 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 61 c2eqzA_ not modelled 6.0 14 PDB header:transcription Chain: A: PDB Molecule:high mobility group protein b3; PDBTitle: solution structure of the first hmg-box domain from high2 mobility group protein b3 62 c2gleA_ not modelled 5.9 29 PDB header:protein binding Chain: A: PDB Molecule:neurabin-1; PDBTitle: solution structure of neurabin sam domain 63 c3nqjA_ not modelled 5.8 44 PDB header:dna binding protein Chain: A: PDB Molecule:histone h3-like centromeric protein a; PDBTitle: crystal structure of (cenp-a/h4)2 heterotetramer 64 c2l5aA_ not modelled 5.8 56 PDB header:nuclear protein Chain: A: PDB Molecule:histone h3-like centromeric protein cse4, protein scm3, PDBTitle: structural basis for recognition of centromere specific histone h32 variant by nonhistone scm3 65 c2b6gA_ not modelled 5.8 29 PDB header:rna binding protein Chain: A: PDB Molecule:vts1p; PDBTitle: rna recognition by the vts1 sam domain 66 d2gzka2 not modelled 5.7 26 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 67 c1hrzA_ not modelled 5.7 26 PDB header:dna binding protein/dna Chain: A: PDB Molecule:human sry; PDBTitle: the 3d structure of the human sry-dna complex solved by2 multi-dimensional heteronuclear-edited and-filtered nmr 68 c1hryA_ not modelled 5.7 26 PDB header:dna binding protein/dna Chain: A: PDB Molecule:human sry; PDBTitle: the 3d structure of the human sry-dna complex solved by2 multid-dimensional heteronuclear-edited and-filtered nmr 69 c3gtzA_ not modelled 5.7 30 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative translation initiation inhibitor; PDBTitle: crystal structure of a putative translation initiation inhibitor from2 salmonella typhimurium 70 d1wuda1 not modelled 5.7 17 Fold:SAM domain-like Superfamily:HRDC-like Family:HRDC domain from helicases 71 c2e8nA_ not modelled 5.7 35 PDB header:transferase, signaling protein Chain: A: PDB Molecule:ephrin type-a receptor 2; PDBTitle: solution structure of the c-terminal sam-domain of ephaa2:2 ephrin type-a receptor 2 precursor (ec 2.7.10.1) 72 d1a62a2 not modelled 5.6 27 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 73 c3h8mB_ not modelled 5.5 17 PDB header:transferase Chain: B: PDB Molecule:ephrin type-a receptor 7; PDBTitle: sam domain of human ephrin type-a receptor 7 (epha7) 74 d1j46a_ not modelled 5.5 25 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 75 c2dl0A_ not modelled 5.4 20 PDB header:signaling protein Chain: A: PDB Molecule:sam and sh3 domain-containing protein 1; PDBTitle: solution structure of the sam-domain of the sam and sh32 domain containing protein 1 76 c2dyyG_ not modelled 5.4 35 PDB header:structural genomics, unknown function Chain: G: PDB Molecule:upf0076 protein ph0854; PDBTitle: crystal structure of putative translation initiation2 inhibitor ph0854 from pyrococcus horikoshii 77 c3v4dC_ not modelled 5.3 31 PDB header:oxidoreductase Chain: C: PDB Molecule:aminoacrylate peracid reductase rutc; PDBTitle: crystal structure of rutc protein a member of the yjgf family from2 e.coli 78 c1pk1A_ not modelled 5.3 13 PDB header:transcription repression Chain: A: PDB Molecule:polyhomeotic-proximal chromatin protein; PDBTitle: hetero sam domain structure of ph and scm. 79 d1pk1c1 not modelled 5.2 13 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 80 d1coka_ not modelled 5.2 24 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 81 d1mz4a_ not modelled 5.1 17 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 82 d1b0xa_ not modelled 5.1 29 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 83 c1b0xA_ not modelled 5.1 29 PDB header:transferase Chain: A: PDB Molecule:protein (epha4 receptor tyrosine kinase); PDBTitle: the crystal structure of an eph receptor sam domain reveals2 a mechanism for modular dimerization. 84 d1gt0d_ not modelled 5.1 26 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 85 d1j7ha_ not modelled 5.1 26 Fold:Bacillus chorismate mutase-like Superfamily:YjgF-like Family:YjgF/L-PSP 86 d1icha_ not modelled 5.0 21 Fold:DEATH domain Superfamily:DEATH domain Family:DEATH domain, DD

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0