PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2zbtB_

Fold library id	PDB Header	Molecule	Title
c2zbtB_	PDB header: lyase	Chain: B: PDB Molecule: pyridoxal biosynthesis lyase pdxs;	PDBTitle: crystal structure of pyridoxine biosynthesis protein from2 thermus thermophilus hb8

Links to external resources
Added to library: Tue Mar 16 13:38:01 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M E K G T F Q I K T G F A E M F K G G V I M D V T T P E Q A V I A E E A G A V A V M A L E R V P A D I R A Q G G V A R M S D P K I I K E I M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S G G G T T S S T
S
S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A A V S I P V M A K V R I G H F V E A M I L E A I G V D F I D E S E V L T P A D E E H H I D K W K F K V P F V C G A R N L G E A L R R I A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
T T
S T T S
S
S S
G G G
S S
S S T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G A A M I R T K G E A G T G N V V E A V R H A R T M W K E I R Y V Q S L R E D E L M A Y A K E I G A P F E L V K W V H D H G R L P V V N F A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
S S S
T S
G G G T
S S
S S B

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . .

Sequence A G G I A T P A D A A L M M H L G M D G V F V G S G I F K S G D P R K R A R A I V R A V A H Y N D P E V L A E V S E D L G E P M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S T T
S
G G G G G S S
T T T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	E	K	G	T	F	Q	I	K	T	G	F	A	E	M	F	K	G	G	V	I	M	D	V	T	T	P	E	Q	A	V	I	A	E	E	A	G	A	V	A	V	M	A	L	E	R	V	P	A	D	I	R	A	Q	G	G	V	A	R	M	S	D	P	K	I	I	K	E	I	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S	S	G	G	G	T	T							S	S											T		S						S	S								T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	A	V	S	I	P	V	M	A	K	V	R	I	G	H	F	V	E	A	M	I	L	E	A	I	G	V	D	F	I	D	E	S	E	V	L	T	P	A	D	E	E	H	H	I	D	K	W	K	F	K	V	P	F	V	C	G	A	R	N	L	G	E	A	L	R	R	I	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S								T	T											T	T		S						T	T	S			S		S	S					G	G	G		S	S							S	S										T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	A	A	M	I	R	T	K	G	E	A	G	T	G	N	V	V	E	A	V	R	H	A	R	T	M	W	K	E	I	R	Y	V	Q	S	L	R	E	D	E	L	M	A	Y	A	K	E	I	G	A	P	F	E	L	V	K	W	V	H	D	H	G	R	L	P	V	V	N	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S								S	S	S			T																				S		G	G	G									T													S	S		S	S				B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Sequence	A	G	G	I	A	T	P	A	D	A	A	L	M	M	H	L	G	M	D	G	V	F	V	G	S	G	I	F	K	S	G	D	P	R	K	R	A	R	A	I	V	R	A	V	A	H	Y	N	D	P	E	V	L	A	E	V	S	E	D	L	G	E	P	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S			S										T	T		S						G	G	G	G	G	S	S															T	T	T										T	T