PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2l5aA_

Fold library id	PDB Header	Molecule	Title
c2l5aA_	PDB header: nuclear protein	Chain: A: PDB Molecule: histone h3-like centromeric protein cse4, protein scm3,	PDBTitle: structural basis for recognition of centromere specific histone h32 variant by nonhistone scm3

Links to external resources
Added to library: Sat Mar 19 08:44:27 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L I S K I P F A R L V K E V T D E F T T K D Q D L R W Q S M A I M A L Q E A S E A Y L V G L L E H T N L L A L H A K R I T I M K K D M Q L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T S
G G G T T
S T T T S G G G T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R R I R G Q F L V P R G S M E R H K L A D E N M R K V W S N I I S K Y E S I E E Q G D L V D L K T G E I V E D N G H I K T L T A N N S T K D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S
S
S S S
T T
S
S S S S
S
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K R T K Y T S V L R D I I D I S D E E D G D K G G V K R I S G L I Y E E V R A V L K S F L E S V I R D S V T Y T E H A K R K T V T S L D V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T
T T S
T T
T T T T T T
S

. . . . . . . . . 220 . . . . .

Sequence Y A L K R Q G R T L Y G F G G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	I	S	K	I	P	F	A	R	L	V	K	E	V	T	D	E	F	T	T	K	D	Q	D	L	R	W	Q	S	M	A	I	M	A	L	Q	E	A	S	E	A	Y	L	V	G	L	L	E	H	T	N	L	L	A	L	H	A	K	R	I	T	I	M	K	K	D	M	Q	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S														T	S		G	G	G	T	T																																S	T	T	T	S	G	G	G	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	R	I	R	G	Q	F	L	V	P	R	G	S	M	E	R	H	K	L	A	D	E	N	M	R	K	V	W	S	N	I	I	S	K	Y	E	S	I	E	E	Q	G	D	L	V	D	L	K	T	G	E	I	V	E	D	N	G	H	I	K	T	L	T	A	N	N	S	T	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	S	S		S					S	S	S																							T	T					S				S	S	S	S												S						G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	R	T	K	Y	T	S	V	L	R	D	I	I	D	I	S	D	E	E	D	G	D	K	G	G	V	K	R	I	S	G	L	I	Y	E	E	V	R	A	V	L	K	S	F	L	E	S	V	I	R	D	S	V	T	Y	T	E	H	A	K	R	K	T	V	T	S	L	D	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	T												T			T	T	S			T	T			T	T	T	T																												T	T			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Sequence	Y	A	L	K	R	Q	G	R	T	L	Y	G	F	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T