Email l.a.kelley@imperial.ac.uk Description Q47702 Date Thu Jan 5 12:37:06 GMT 2012 Unique Job ID 063190a76cdd272b

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1t3ua_ 81.3 21 Fold:Cell division protein ZapA-like Superfamily:Cell division protein ZapA-like Family:Cell division protein ZapA-like 2 c2jtcA_ 66.3 13 PDB header:hydrolase Chain: A: PDB Molecule:streptopain; PDBTitle: 3d structure and backbone dynamics of spe b 3 d1dkia_ 63.8 16 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Papain-like 4 d1pvja_ 55.5 16 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Papain-like 5 d1v61a_ 44.3 21 Fold:PH domain-like barrel Superfamily:PH domain-like Family:Pleckstrin-homology domain (PH domain) 6 d1iyjb5 37.9 14 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 7 d1miua5 28.7 15 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 8 c3hnwB_ 15.9 12 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a basic coiled-coil protein of unknown function2 from eubacterium eligens atcc 27750 9 c3bb7A_ 15.1 12 PDB header:hydrolase Chain: A: PDB Molecule:interpain a; PDBTitle: structure of prevotella intermedia prointerpain a fragment 39-3592 (mutant c154a) 10 d1o5ha_ 14.9 29 Fold:Methenyltetrahydrofolate cyclohydrolase-like Superfamily:Methenyltetrahydrofolate cyclohydrolase-like Family:Methenyltetrahydrofolate cyclohydrolase-like 11 c2eelA_ 14.9 30 PDB header:apoptosis Chain: A: PDB Molecule:cell death activator cide-a; PDBTitle: solution structure of the cide-n domain of human cell death2 activator cide-a 12 d1xaua_ 11.6 25 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:I set domains 13 c3ln3A_ 11.3 23 PDB header:oxidoreductase Chain: A: PDB Molecule:dihydrodiol dehydrogenase; PDBTitle: crystal structure of putative reductase (np_038806.2) from2 mus musculus at 1.18 a resolution 14 c2p4vA_ 10.6 7 PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor greb; PDBTitle: crystal structure of the transcript cleavage factor, greb2 at 2.6a resolution 15 d2ae8a2 10.1 50 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Imidazole glycerol phosphate dehydratase 16 d1rhya2 10.1 38 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Imidazole glycerol phosphate dehydratase 17 d1mhqa_ 10.0 18 Fold:alpha-alpha superhelix Superfamily:ENTH/VHS domain Family:VHS domain 18 c3zyqA_ 9.6 15 PDB header:signaling Chain: A: PDB Molecule:hepatocyte growth factor-regulated tyrosine kinase PDBTitle: crystal structure of the tandem vhs and fyve domains of hepatocyte2 growth factor-regulated tyrosine kinase substrate (hgs-hrs) at 1.483 a resolution 19 c3cxbB_ 9.4 7 PDB header:signaling protein Chain: B: PDB Molecule:pleckstrin homology domain-containing family m PDBTitle: crystal structure of sifa and skip 20 d2f1da2 9.2 38 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Imidazole glycerol phosphate dehydratase 21 c2hj3A_ not modelled 9.0 22 PDB header:oxidoreductase Chain: A: PDB Molecule:sulfhydryl oxidase erv1p; PDBTitle: structure of the arabidopsis thaliana erv1 thiol oxidase 22 d1eg3a2 not modelled 8.8 21 Fold:EF Hand-like Superfamily:EF-hand Family:EF-hand modules in multidomain proteins 23 d1mjda_ not modelled 8.7 50 Fold:beta-Grasp (ubiquitin-like) Superfamily:Doublecortin (DC) Family:Doublecortin (DC) 24 d2p6va1 not modelled 8.7 27 Fold:TAFH domain-like Superfamily:TAFH domain-like Family:TAFH domain-like 25 d1f45b_ not modelled 8.6 18 Fold:4-helical cytokines Superfamily:4-helical cytokines Family:Long-chain cytokines 26 d1rxwa1 not modelled 8.5 26 Fold:SAM domain-like Superfamily:5' to 3' exonuclease, C-terminal subdomain Family:5' to 3' exonuclease, C-terminal subdomain 27 c2dnfA_ not modelled 8.4 30 PDB header:protein binding Chain: A: PDB Molecule:doublecortin domain-containing protein 2; PDBTitle: solution structure of rsgi ruh-062, a dcx domain from human 28 c3s6n2_ not modelled 8.0 33 PDB header:splicing Chain: 2: PDB Molecule:survival of motor neuron protein-interacting protein 1; PDB Fragment:gemin2-binding domain; PDBTitle: crystal structure of the gemin2-binding domain of smn, gemin2 in2 complex with smd1/d2/f/e/g from human 29 d1dj0a_ not modelled 8.0 25 Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase I TruA 30 d1mg4a_ not modelled 7.8 50 Fold:beta-Grasp (ubiquitin-like) Superfamily:Doublecortin (DC) Family:Doublecortin (DC) 31 d2aw2a1 not modelled 7.6 25 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:V set domains (antibody variable domain-like) 32 d1huna_ not modelled 7.5 0 Fold:IL8-like Superfamily:Interleukin 8-like chemokines Family:Interleukin 8-like chemokines 33 c3bbaB_ not modelled 7.4 14 PDB header:hydrolase Chain: B: PDB Molecule:interpain a; PDBTitle: structure of active wild-type prevotella intermedia interpain a2 cysteine protease 34 d1jr8a_ not modelled 7.3 14 Fold:Four-helical up-and-down bundle Superfamily:FAD-dependent thiol oxidase Family:FAD-dependent thiol oxidase 35 c2ae8C_ not modelled 7.3 50 PDB header:lyase Chain: C: PDB Molecule:imidazoleglycerol-phosphate dehydratase; PDBTitle: crystal structure of imidazoleglycerol-phosphate dehydratase from2 staphylococcus aureus subsp. aureus n315 36 d2cmda2 not modelled 7.1 21 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 37 c1rhyB_ not modelled 7.1 38 PDB header:lyase Chain: B: PDB Molecule:imidazole glycerol phosphate dehydratase; PDBTitle: crystal structure of imidazole glycerol phosphate dehydratase 38 d1dvpa1 not modelled 7.0 17 Fold:alpha-alpha superhelix Superfamily:ENTH/VHS domain Family:VHS domain 39 c1tg6G_ not modelled 7.0 14 PDB header:hydrolase Chain: G: PDB Molecule:putative atp-dependent clp protease proteolytic subunit; PDBTitle: crystallography and mutagenesis point to an essential role for the n-2 terminus of human mitochondrial clpp 40 d1gvpa_ not modelled 6.9 50 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Phage ssDNA-binding proteins 41 d1uf0a_ not modelled 6.8 45 Fold:beta-Grasp (ubiquitin-like) Superfamily:Doublecortin (DC) Family:Doublecortin (DC) 42 d1f5qb2 not modelled 6.8 38 Fold:Cyclin-like Superfamily:Cyclin-like Family:Cyclin 43 d2raxa1 not modelled 6.6 15 Fold:Inhibitor of apoptosis (IAP) repeat Superfamily:Inhibitor of apoptosis (IAP) repeat Family:Inhibitor of apoptosis (IAP) repeat 44 c2f1dP_ not modelled 6.6 38 PDB header:lyase Chain: P: PDB Molecule:imidazoleglycerol-phosphate dehydratase 1; PDBTitle: x-ray structure of imidazoleglycerol-phosphate dehydratase 45 d1v89a_ not modelled 6.6 15 Fold:PH domain-like barrel Superfamily:PH domain-like Family:Pleckstrin-homology domain (PH domain) 46 d1a77a1 not modelled 6.5 18 Fold:SAM domain-like Superfamily:5' to 3' exonuclease, C-terminal subdomain Family:5' to 3' exonuclease, C-terminal subdomain 47 c3rruA_ not modelled 6.5 11 PDB header:signaling protein Chain: A: PDB Molecule:tom1l1 protein; PDBTitle: x-ray crystal structure of the vhs domain of human tom1-like protein,2 northeast structural genomics consortium target hr3050e 48 c3nqwB_ not modelled 6.5 19 PDB header:hydrolase Chain: B: PDB Molecule:cg11900; PDBTitle: a metazoan ortholog of spot hydrolyzes ppgpp and plays a role in2 starvation responses 49 d1grja1 not modelled 6.2 14 Fold:Long alpha-hairpin Superfamily:GreA transcript cleavage protein, N-terminal domain Family:GreA transcript cleavage protein, N-terminal domain 50 c1miuA_ not modelled 6.1 23 PDB header:gene regulation/antitumor protein Chain: A: PDB Molecule:breast cancer type 2 susceptibility protein; PDBTitle: structure of a brca2-dss1 complex 51 c2uxsA_ not modelled 6.0 16 PDB header:hydrolase Chain: A: PDB Molecule:inorganic pyrophosphatase; PDBTitle: 2.7a crystal structure of inorganic pyrophosphatase (rv3628)2 from mycobacterium tuberculosis at ph 7.5 52 c1jfiA_ not modelled 5.8 14 PDB header:transcription/dna Chain: A: PDB Molecule:transcription regulator nc2 alpha chain; PDBTitle: crystal structure of the nc2-tbp-dna ternary complex 53 d1jfia_ not modelled 5.8 14 Fold:Histone-fold Superfamily:Histone-fold Family:TBP-associated factors, TAFs 54 d1h3ob_ not modelled 5.7 33 Fold:Histone-fold Superfamily:Histone-fold Family:TBP-associated factors, TAFs 55 c3m1eA_ not modelled 5.7 10 PDB header:transcription regulator Chain: A: PDB Molecule:hth-type transcriptional regulator benm; PDBTitle: crystal structure of benm_dbd 56 c2jobA_ not modelled 5.7 31 PDB header:lipid binding protein Chain: A: PDB Molecule:antilipopolysaccharide factor; PDBTitle: solution structure of an antilipopolysaccharide factor from2 shrimp and its possible lipid a binding site 57 d2pp4a1 not modelled 5.6 23 Fold:TAFH domain-like Superfamily:TAFH domain-like Family:TAFH domain-like 58 d1v5ua_ not modelled 5.6 18 Fold:PH domain-like barrel Superfamily:PH domain-like Family:Pleckstrin-homology domain (PH domain) 59 c2jveA_ not modelled 5.5 83 PDB header:toxin Chain: A: PDB Molecule:prod1; PDBTitle: solution structure of the extracellular domain of prod1, a2 protein implicated in proximodistal identity during3 amphibian limb regeneration 60 c2k9iB_ not modelled 5.3 21 PDB header:dna binding protein Chain: B: PDB Molecule:plasmid prn1, complete sequence; PDBTitle: nmr structure of plasmid copy control protein orf56 from2 sulfolobus islandicus 61 c1tt9B_ not modelled 5.3 24 PDB header:transferase, lyase Chain: B: PDB Molecule:formimidoyltransferase-cyclodeaminase PDBTitle: structure of the bifunctional and golgi associated2 formiminotransferase cyclodeaminase octamer 62 c1vs3B_ not modelled 5.2 21 PDB header:isomerase Chain: B: PDB Molecule:trna pseudouridine synthase a; PDBTitle: crystal structure of the trna pseudouridine synthase trua from thermus2 thermophilus hb8