Fold library entry viewer: d1pvja_

Added to library: Tue Mar 16 12:07:45 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	A	R	N	E	K	E	A	K	D	S	A	I	T	F	I	Q	K	I	K	L	D	K	V	N	L	G	G	E	L	S	G	S	N	M	Y	V	Y	N	I	S	T	G	G	F	V	I	V	S	G	D	K	R	S	P	E	I	L	G	Y	S	T	S	G	S	F	D	A	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B																										T	T	T		S	S	S							T	T	S							S	B	T	T	S		S						S	S	S					T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	E	N	I	A	S	F	M	E	S	Y	V	E	Q	I	K	E	N	K	K	L	D	T	T	Y	A	Q	P	V	V	K	S	L	L	D	S	K	G	I	H	Y	N	Q	G	N	P	Y	N	L	L	T	P	V	I	E	K	V	K	P	G	E	Q	S	F	V	G	Q	H	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	G	G	G	G			S							B			T	T	G	G	G	T					S	S	T	T	G	G	G	G	S		B			S			T	T	S				T	T	S	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	G	C	V	A	T	A	T	A	Q	I	M	K	Y	H	N	Y	P	N	K	G	L	K	D	Y	T	Y	T	L	S	S	N	N	P	Y	F	N	H	P	K	N	L	F	A	A	I	S	T	R	Q	Y	N	W	N	N	I	L	P	T	Y	S	G	R	E	S	N	V	Q	K	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T			S	B			S								T	T		T	T	S		S	S							G	G	G		B			T	T	T	S		S				S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	I	S	E	L	M	A	D	V	G	I	S	V	D	M	D	Y	G	P	S	S	G	S	A	G	S	S	R	V	Q	R	A	L	K	E	N	F	G	Y	N	Q	S	V	H	Q	I	N	R	G	D	F	S	K	Q	D	W	E	A	Q	I	D	K	E	L	S	Q	N	Q	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T		B		S	S	S		B														T	T				T	T						G	G	G	S															T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Sequence	Y	Y	Q	G	V	G	K	V	G	G	H	A	F	V	I	D	G	A	D	G	R	N	F	Y	H	V	N	W	G	W	G	G	V	S	D	G	F	F	R	L	D	A	L	N	P	G	F	N	G	Y	Q	S	A	V	V	G	I	K	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T												S	S	S							S	S	T	T	T	T						S									T	T

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PDB structure

FASTA sequence

Hidden Markov model

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