Fold library entry viewer: c1miuA_

Added to library: Tue Mar 16 13:15:43 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	D	L	M	S	S	L	Q	S	A	R	D	L	Q	D	M	R	I	K	N	K	E	R	R	H	L	R	L	Q	P	G	S	L	Y	L	T	K	S	S	T	L	P	R	I	S	L	Q	A	A	V	G	D	R	A	P	S	A	C	S	P	K	Q	L	Y	I	Y	G	V	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S																			T	S														T	S		S					T	T	G	G	G	T	S		S					T	T		S		S	S	S				S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	C	I	N	V	N	S	K	N	A	E	Y	F	Q	F	D	I	Q	D	H	F	G	K	E	D	L	C	A	G	K	G	F	Q	L	A	D	G	G	W	L	I	P	S	N	D	G	K	A	G	K	E	E	F	Y	R	A	L	C	D	T	P	G	V	D	P	K	L	I	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S			T	T	T	T	T	T					T					T	T	T	S	T	T		T	T					T	T	S							T	T	S														S	T	T			T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	W	V	A	N	H	Y	R	W	I	V	W	K	L	A	A	M	E	F	A	F	P	K	E	F	A	N	R	C	L	N	P	E	R	V	L	L	Q	L	K	Y	R	Y	D	V	E	I	D	N	S	R	R	S	A	L	K	K	I	L	E	R	D	D	T	A	A	K	T	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	S	T	T		T	T	T		S	S	S	S	S	S																T	T	S											T	T	S	S			B		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	C	I	S	D	I	V	D	T	I	E	L	T	D	G	W	Y	A	V	R	A	Q	L	D	P	P	L	M	A	L	V	K	S	G	K	L	T	V	G	Q	K	I	I	T	Q	G	A	E	L	V	G	S	P	D	A	C	A	P	L	E	A	P	D	S	L	R	L	K	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S	S																	T	T		S		S	S		B				S	S	B				S			S				T	T	S			S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	N	S	T	R	P	A	R	W	H	S	R	L	G	F	F	R	D	P	R	P	F	P	L	P	L	S	S	L	F	S	D	G	G	N	V	G	C	V	D	I	I	V	Q	R	V	Y	P	L	Q	W	V	E	K	T	V	S	G	L	Y	I	F	R	S	E	R	E	E	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G						S	S			S				S			S						G	G	G			S	S	S																	B						S	S	S							T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	A	L	R	F	A	E	A	Q	Q	K	K	L	E	A	L	F	T	K	V	H	T	E	F	K	S	R	T	L	T	R	Q	Q	V	H	A	L	Q	D	G	A	E	L	Y	A	A	V	Q	Y	A	S	D	P	D	H	L	E	A	C	F	S	E	E	Q	L	R	A	L	N	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T											T	T						T	T						T	T	S	S										S		S	S	S	T	T	T	T	T	S			S	S	T	T	S	S	S	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Y	R	Q	M	L	N	D	K	K	Q	A	R	I	Q	S	E	F	R	K	A	L	E	S	A	E	K	E	E	G	L	S	R	D	V	T	T	V	W	K	L	R	V	T	S	Y	K	K	K	E	K	S	A	L	L	S	I	W	R	P	S	S	D	L	S	S	L	L	T	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S																		T					T	T	T	T	T					B											S	S	S	S										S											S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	R	Y	R	I	Y	H	L	A	V	S	K	S	K	S	K	F	E	R	P	S	I	Q	L	T	A	T	K	R	T	Q	Y	Q	Q	L	P	V	S	S	E	T	L	L	Q	V	Y	Q	P	R	E	S	L	H	F	S	R	L	S	D	P	A	F	Q	P	P	C	S	E	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	S	S			S																						T	T	T						B			S	G	G	G	G	S	S	S			T	T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	V	V	G	V	V	V	S	V	V	K	P	I	G	L	A	P	L	V	Y	L	S	D	E	C	L	N	L	L	V	V	K	F	G	I	D	L	N	E	D	I	K	P	R	V	L	I	A	A	S	N	L	Q	C	Q	P	E	S	T	S	G	V	P	T	L	F	A	G	H	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S									S	S	S								S	S				S				S	S												S			S	S	S								T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.
Sequence	I	F	S	A	S	P	K	E	A	Y	F	Q	E	K	V	N	N	L	K	H	A	I	E	N	I	D	T	F	Y	K	E	A	E	K	K	L	I	H	V	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S				T	T	T								T					T	T		S

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PDB structure

FASTA sequence

Hidden Markov model

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