Email l.a.kelley@imperial.ac.uk Description P09030 Date Thu Jan 5 11:01:48 GMT 2012 Unique Job ID 05839f48d7e114b5

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1akoa_ 100.0 100 Fold:DNase I-like Superfamily:DNase I-like Family:DNase I-like 2 c2voaB_ 100.0 31 PDB header:lyase Chain: B: PDB Molecule:exodeoxyribonuclease iii; PDBTitle: structure of an ap endonuclease from archaeoglobus fulgidus 3 c2jc4A_ 100.0 36 PDB header:hydrolase Chain: A: PDB Molecule:exodeoxyribonuclease iii; PDBTitle: 3'-5' exonuclease (nexo) from neisseria meningitidis 4 c2j63B_ 100.0 23 PDB header:lyase Chain: B: PDB Molecule:ap-endonuclease; PDBTitle: crystal structure of ap endonuclease lmap from leishmania2 major 5 c3g0rA_ 100.0 28 PDB header:hydrolase/dna Chain: A: PDB Molecule:exodeoxyribonuclease; PDBTitle: complex of mth0212 and an 8bp dsdna with distorted ends 6 c2jc5A_ 100.0 23 PDB header:hydrolase Chain: A: PDB Molecule:exodeoxyribonuclease; PDBTitle: apurinic apyrimidinic (ap) endonuclease (nape) from2 neisseria meningitidis 7 c1e9nB_ 100.0 24 PDB header:dna repair Chain: B: PDB Molecule:dna-(apurinic or apyrimidinic site) lyase; PDBTitle: a second divalent metal ion in the active site of a new2 crystal form of human apurinic/apyrimidinic endonuclease,3 ape1, and its implications for the catalytic mechanism 8 c3tebA_ 100.0 18 PDB header:hydrolase Chain: A: PDB Molecule:endonuclease/exonuclease/phosphatase; PDBTitle: endonuclease/exonuclease/phosphatase family protein from leptotrichia2 buccalis c-1013-b 9 d1vyba_ 100.0 24 Fold:DNase I-like Superfamily:DNase I-like Family:DNase I-like 10 d1hd7a_ 100.0 25 Fold:DNase I-like Superfamily:DNase I-like Family:DNase I-like 11 c3g6sA_ 100.0 16 PDB header:hydrolase Chain: A: PDB Molecule:putative endonuclease/exonuclease/phosphatase PDBTitle: crystal structure of the2 endonuclease/exonuclease/phosphatase (bvu_0621) from3 bacteroides vulgatus. northeast structural genomics4 consortium target bvr56d 12 c3ngoA_ 100.0 16 PDB header:hydrolase/dna Chain: A: PDB Molecule:ccr4-not transcription complex subunit 6-like; PDBTitle: crystal structure of the human cnot6l nuclease domain in complex with2 poly(a) dna 13 c3mprB_ 100.0 17 PDB header:hydrolase Chain: B: PDB Molecule:putative endonuclease/exonuclease/phosphatase family PDBTitle: crystal structure of endonuclease/exonuclease/phosphatase family2 protein from bacteroides thetaiotaomicron, northeast structural3 genomics consortium target btr318a 14 d2imqx1 100.0 13 Fold:DNase I-like Superfamily:DNase I-like Family:Inositol polyphosphate 5-phosphatase (IPP5) 15 d1zwxa1 100.0 14 Fold:DNase I-like Superfamily:DNase I-like Family:Sphingomyelin phosphodiesterase-like 16 c3i46B_ 99.9 17 PDB header:toxin Chain: B: PDB Molecule:beta-hemolysin; PDBTitle: crystal structure of beta toxin from staphylococcus aureus f277a,2 p278a mutant with bound calcium ions 17 c3mtcA_ 99.9 14 PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:type ii inositol-1,4,5-trisphosphate 5-phosphatase; PDBTitle: crystal structure of inpp5b in complex with phosphatidylinositol 4-2 phosphate 18 c3l1wE_ 99.9 16 PDB header:structural genomics, unknown function Chain: E: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of a functionally unknown conserved2 protein from enterococcus faecalis v583 19 d2ddra1 99.9 20 Fold:DNase I-like Superfamily:DNase I-like Family:Sphingomyelin phosphodiesterase-like 20 c3nr8A_ 99.9 16 PDB header:hydrolase Chain: A: PDB Molecule:phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 2; PDBTitle: crystal structure of human ship2 21 d1wdua_ not modelled 99.9 15 Fold:DNase I-like Superfamily:DNase I-like Family:DNase I-like 22 d1sr4b_ not modelled 99.9 16 Fold:DNase I-like Superfamily:DNase I-like Family:DNase I-like 23 d2f1na1 not modelled 99.9 20 Fold:DNase I-like Superfamily:DNase I-like Family:DNase I-like 24 c2ei9A_ not modelled 99.9 14 PDB header:gene regulation Chain: A: PDB Molecule:non-ltr retrotransposon r1bmks orf2 protein; PDBTitle: crystal structure of r1bm endonuclease domain 25 d2a40b1 not modelled 99.9 16 Fold:DNase I-like Superfamily:DNase I-like Family:DNase I-like 26 c2xswB_ not modelled 99.8 16 PDB header:hydrolase Chain: B: PDB Molecule:72 kda inositol polyphosphate 5-phosphatase; PDBTitle: crystal structure of human inpp5e 27 d1i9za_ not modelled 99.8 16 Fold:DNase I-like Superfamily:DNase I-like Family:Inositol polyphosphate 5-phosphatase (IPP5) 28 d3bula2 not modelled 46.3 22 Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain 29 c2vhiG_ not modelled 43.2 8 PDB header:hydrolase Chain: G: PDB Molecule:cg3027-pa; PDBTitle: crystal structure of a pyrimidine degrading enzyme from2 drosophila melanogaster 30 c2i2xD_ not modelled 24.3 22 PDB header:transferase Chain: D: PDB Molecule:methyltransferase 1; PDBTitle: crystal structure of methanol:cobalamin methyltransferase complex2 mtabc from methanosarcina barkeri 31 d1xrsb1 not modelled 23.4 13 Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain 32 d1f89a_ not modelled 19.9 15 Fold:Carbon-nitrogen hydrolase Superfamily:Carbon-nitrogen hydrolase Family:Nitrilase 33 d1emsa2 not modelled 19.5 6 Fold:Carbon-nitrogen hydrolase Superfamily:Carbon-nitrogen hydrolase Family:Nitrilase 34 c1xrsB_ not modelled 17.3 13 PDB header:isomerase Chain: B: PDB Molecule:d-lysine 5,6-aminomutase beta subunit; PDBTitle: crystal structure of lysine 5,6-aminomutase in complex with plp,2 cobalamin, and 5'-deoxyadenosine 35 c2yxbA_ not modelled 16.9 37 PDB header:isomerase Chain: A: PDB Molecule:coenzyme b12-dependent mutase; PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix 36 c1y80A_ not modelled 16.6 35 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:predicted cobalamin binding protein; PDBTitle: structure of a corrinoid (factor iiim)-binding protein from2 moorella thermoacetica 37 d1ccwa_ not modelled 16.1 13 Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain 38 c1bmtB_ not modelled 15.7 22 PDB header:methyltransferase Chain: B: PDB Molecule:methionine synthase; PDBTitle: how a protein binds b12: a 3.o angstrom x-ray structure of2 the b12-binding domains of methionine synthase 39 c2gm2A_ not modelled 14.0 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: nmr structure of xanthomonas campestris xcc1710: northeast2 structural genomics consortium target xcr35 40 c1k98A_ not modelled 13.8 22 PDB header:transferase Chain: A: PDB Molecule:methionine synthase; PDBTitle: adomet complex of meth c-terminal fragment 41 c3jvvA_ not modelled 12.5 15 PDB header:atp binding protein Chain: A: PDB Molecule:twitching mobility protein; PDBTitle: crystal structure of p. aeruginosa pilt with bound amp-pcp 42 d1g6oa_ not modelled 11.5 14 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 43 c2w1vA_ not modelled 10.8 22 PDB header:hydrolase Chain: A: PDB Molecule:nitrilase homolog 2; PDBTitle: crystal structure of mouse nitrilase-2 at 1.4a resolution 44 d1uf5a_ not modelled 10.2 14 Fold:Carbon-nitrogen hydrolase Superfamily:Carbon-nitrogen hydrolase Family:Carbamilase 45 c3ezxA_ not modelled 9.8 17 PDB header:transferase Chain: A: PDB Molecule:monomethylamine corrinoid protein 1; PDBTitle: structure of methanosarcina barkeri monomethylamine2 corrinoid protein 46 c3hkxA_ not modelled 9.6 9 PDB header:hydrolase Chain: A: PDB Molecule:amidase; PDBTitle: crystal structure analysis of an amidase from nesterenkonia sp. 47 c3nrbD_ not modelled 9.4 41 PDB header:hydrolase Chain: D: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (puru,2 pp_1943) from pseudomonas putida kt2440 at 2.05 a resolution 48 c3n0vD_ not modelled 9.3 12 PDB header:hydrolase Chain: D: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pp_0327)2 from pseudomonas putida kt2440 at 2.25 a resolution 49 c2eyuA_ not modelled 8.9 16 PDB header:protein transport Chain: A: PDB Molecule:twitching motility protein pilt; PDBTitle: the crystal structure of the c-terminal domain of aquifex2 aeolicus pilt 50 c3n05B_ not modelled 8.7 6 PDB header:ligase Chain: B: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: crystal structure of nh3-dependent nad+ synthetase from streptomyces2 avermitilis 51 c2p10D_ not modelled 8.5 15 PDB header:hydrolase Chain: D: PDB Molecule:mll9387 protein; PDBTitle: crystal structure of a putative phosphonopyruvate hydrolase (mll9387)2 from mesorhizobium loti maff303099 at 2.15 a resolution 52 c3o1lB_ not modelled 8.1 35 PDB header:hydrolase Chain: B: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pspto_4314)2 from pseudomonas syringae pv. tomato str. dc3000 at 2.20 a resolution 53 c3obiC_ not modelled 8.1 18 PDB header:hydrolase Chain: C: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (np_949368)2 from rhodopseudomonas palustris cga009 at 1.95 a resolution 54 c2gzaB_ not modelled 8.1 16 PDB header:hydrolase Chain: B: PDB Molecule:type iv secretion system protein virb11; PDBTitle: crystal structure of the virb11 atpase from the brucella suis type iv2 secretion system in complex with sulphate 55 c3louB_ not modelled 7.9 18 PDB header:hydrolase Chain: B: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of formyltetrahydrofolate deformylase (yp_105254.1)2 from burkholderia mallei atcc 23344 at 1.90 a resolution 56 d1p9ra_ not modelled 7.5 14 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 57 c1emsB_ not modelled 7.3 9 PDB header:antitumor protein Chain: B: PDB Molecule:nit-fragile histidine triad fusion protein; PDBTitle: crystal structure of the c. elegans nitfhit protein 58 c2dclB_ not modelled 7.1 15 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical upf0166 protein ph1503; PDBTitle: structure of ph1503 protein from pyrococcus horikoshii ot3 59 d1j31a_ not modelled 6.9 18 Fold:Carbon-nitrogen hydrolase Superfamily:Carbon-nitrogen hydrolase Family:Carbamilase 60 c3p9xB_ not modelled 6.9 18 PDB header:transferase Chain: B: PDB Molecule:phosphoribosylglycinamide formyltransferase; PDBTitle: crystal structure of phosphoribosylglycinamide formyltransferase from2 bacillus halodurans 61 c3q9cF_ not modelled 6.8 7 PDB header:hydrolase Chain: F: PDB Molecule:acetylpolyamine amidohydrolase; PDBTitle: crystal structure of h159a apah complexed with n8-acetylspermidine 62 d2odka1 not modelled 6.6 12 Fold:YefM-like Superfamily:YefM-like Family:YefM-like 63 d3bzka5 not modelled 6.4 33 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Tex RuvX-like domain-like 64 c3kxyB_ not modelled 6.4 13 PDB header:chaperone/transcription inhibitor Chain: B: PDB Molecule:exoenzyme s synthesis protein c; PDBTitle: crystal structure of the exsc-exse complex 65 d1fmfa_ not modelled 6.3 13 Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain 66 d2fvta1 not modelled 6.3 6 Fold:MTH938-like Superfamily:MTH938-like Family:MTH938-like 67 d2eg6a1 not modelled 6.2 50 Fold:TIM beta/alpha-barrel Superfamily:Metallo-dependent hydrolases Family:Dihydroorotase 68 d1zgha2 not modelled 6.0 15 Fold:Formyltransferase Superfamily:Formyltransferase Family:Formyltransferase 69 c2odkD_ not modelled 5.9 11 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:hypothetical protein; PDBTitle: putative prevent-host-death protein from nitrosomonas europaea 70 d1noya_ not modelled 5.9 12 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease 71 d1ih7a1 not modelled 5.9 6 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease 72 d1o51a_ not modelled 5.7 8 Fold:Ferredoxin-like Superfamily:GlnB-like Family:DUF190/COG1993 73 c3jzeC_ not modelled 5.6 50 PDB header:hydrolase Chain: C: PDB Molecule:dihydroorotase; PDBTitle: 1.8 angstrom resolution crystal structure of dihydroorotase (pyrc)2 from salmonella enterica subsp. enterica serovar typhimurium str. lt2 74 c2gszE_ not modelled 5.5 21 PDB header:protein transport Chain: E: PDB Molecule:twitching motility protein pilt; PDBTitle: structure of a. aeolicus pilt with 6 monomers per2 asymmetric unit 75 c3pnuA_ not modelled 5.4 67 PDB header:hydrolase Chain: A: PDB Molecule:dihydroorotase; PDBTitle: 2.4 angstrom crystal structure of dihydroorotase (pyrc) from2 campylobacter jejuni. 76 d1jkxa_ not modelled 5.2 29 Fold:Formyltransferase Superfamily:Formyltransferase Family:Formyltransferase 77 d1uf3a_ not modelled 5.2 17 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:TT1561-like