Email l.a.kelley@imperial.ac.uk Description P77184 Date Thu Jan 5 12:26:08 GMT 2012 Unique Job ID 000843a6966a4a06

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1qj8a_ 99.8 36 Fold:Transmembrane beta-barrels Superfamily:OMPA-like Family:Outer membrane protein 2 c3qraA_ 99.7 37 PDB header:cell invasion Chain: A: PDB Molecule:attachment invasion locus protein; PDBTitle: the crystal structure of ail, the attachment invasion locus protein of2 yersinia pestis 3 c3nb3C_ 99.3 19 PDB header:virus Chain: C: PDB Molecule:outer membrane protein a; PDBTitle: the host outer membrane proteins ompa and ompc are packed at specific2 sites in the shigella phage sf6 virion as structural components 4 d1qjpa_ 99.2 19 Fold:Transmembrane beta-barrels Superfamily:OMPA-like Family:Outer membrane protein 5 c2k0lA_ 99.1 17 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr structure of the transmembrane domain of the outer2 membrane protein a from klebsiella pneumoniae in dhpc3 micelles. 6 d1g90a_ 99.0 19 Fold:Transmembrane beta-barrels Superfamily:OMPA-like Family:Outer membrane protein 7 d1p4ta_ 98.9 23 Fold:Transmembrane beta-barrels Superfamily:OMPA-like Family:Outer membrane protein 8 c2f1tB_ 98.7 17 PDB header:membrane protein Chain: B: PDB Molecule:outer membrane protein w; PDBTitle: outer membrane protein ompw 9 c2jmmA_ 98.7 18 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr solution structure of a minimal transmembrane beta-2 barrel platform protein 10 c2x27X_ 98.6 20 PDB header:membrane protein Chain: X: PDB Molecule:outer membrane protein oprg; PDBTitle: crystal structure of the outer membrane protein oprg from2 pseudomonas aeruginosa 11 d1t16a_ 98.4 14 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Outer membrane protein transport protein 12 c2lhfA_ 98.2 18 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein h1; PDBTitle: solution structure of outer membrane protein h (oprh) from p.2 aeruginosa in dhpc micelles 13 c3brzA_ 98.0 15 PDB header:transport protein Chain: A: PDB Molecule:todx; PDBTitle: crystal structure of the pseudomonas putida toluene2 transporter todx 14 c3bryB_ 97.9 15 PDB header:transport protein Chain: B: PDB Molecule:tbux; PDBTitle: crystal structure of the ralstonia pickettii toluene2 transporter tbux 15 d1uynx_ 97.9 16 Fold:Transmembrane beta-barrels Superfamily:Autotransporter Family:Autotransporter 16 c3dwoX_ 97.8 19 PDB header:membrane protein Chain: X: PDB Molecule:probable outer membrane protein; PDBTitle: crystal structure of a pseudomonas aeruginosa fadl homologue 17 c3kvnA_ 97.4 9 PDB header:hydrolase Chain: A: PDB Molecule:esterase esta; PDBTitle: crystal structure of the full-length autotransporter esta from2 pseudomonas aeruginosa 18 d2zfga1 97.3 14 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 19 d1osma_ 97.3 11 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 20 c3sljA_ 97.0 15 PDB header:protein transport Chain: A: PDB Molecule:serine protease espp; PDBTitle: pre-cleavage structure of the autotransporter espp - n1023a mutant 21 d1phoa_ not modelled 96.6 16 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 22 c3aehB_ not modelled 96.5 14 PDB header:hydrolase Chain: B: PDB Molecule:hemoglobin-binding protease hbp autotransporter; PDBTitle: integral membrane domain of autotransporter hbp 23 d2fgqx1 not modelled 95.7 15 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 24 d2vdfa1 not modelled 95.6 24 Fold:Transmembrane beta-barrels Superfamily:OMPT-like Family:Outer membrane adhesin/invasin OpcA 25 c3nsgA_ not modelled 95.2 17 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein f; PDBTitle: crystal structure of ompf, an outer membrane protein from salmonella2 typhi 26 c2qomB_ not modelled 94.7 18 PDB header:hydrolase Chain: B: PDB Molecule:serine protease espp; PDBTitle: the crystal structure of the e.coli espp autotransporter beta-domain. 27 c3qq2C_ not modelled 93.6 16 PDB header:membrane protein/protein transport Chain: C: PDB Molecule:brka autotransporter; PDBTitle: crystal structure of the beta domain of the bordetella autotransporter2 brka 28 d1a0tp_ not modelled 92.9 12 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Maltoporin-like 29 c2x4mD_ not modelled 86.1 24 PDB header:hydrolase Chain: D: PDB Molecule:coagulase/fibrinolysin; PDBTitle: yersinia pestis plasminogen activator pla 30 d1af6a_ not modelled 85.4 18 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Maltoporin-like 31 d3prna_ not modelled 79.1 14 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 32 d2mpra_ not modelled 78.4 20 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Maltoporin-like 33 d1i78a_ not modelled 78.1 20 Fold:Transmembrane beta-barrels Superfamily:OMPT-like Family:Outer membrane protease OMPT 34 d2gr7a1 not modelled 77.9 28 Fold:Pili subunits Superfamily:Pili subunits Family:YadA C-terminal domain-like 35 c2gr7C_ not modelled 77.9 28 PDB header:membrane protein Chain: C: PDB Molecule:adhesin; PDBTitle: hia 992-1098 36 c3a2rX_ not modelled 66.3 13 PDB header:membrane protein Chain: X: PDB Molecule:outer membrane protein ii; PDBTitle: crystal structure of outer membrane protein porb from neisseria2 meningitidis 37 d2gr8a1 not modelled 58.0 26 Fold:Pili subunits Superfamily:Pili subunits Family:YadA C-terminal domain-like 38 c2o4vA_ not modelled 55.2 24 PDB header:membrane protein Chain: A: PDB Molecule:porin p; PDBTitle: an arginine ladder in oprp mediates phosphate specific transfer across2 the outer membrane 39 c3emoA_ not modelled 53.3 24 PDB header:membrane protein/cell adhesion Chain: A: PDB Molecule:hia (adhesin); PDBTitle: crystal structure of transmembrane hia 973-1098 40 d2pora_ not modelled 49.2 12 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 41 c3rbhC_ not modelled 21.3 14 PDB header:transport protein Chain: C: PDB Molecule:alginate production protein alge; PDBTitle: structure of alginate export protein alge from pseudomonas aeruginosa 42 d1rl6a2 not modelled 17.5 30 Fold:Ribosomal protein L6 Superfamily:Ribosomal protein L6 Family:Ribosomal protein L6 43 c2y0lA_ not modelled 11.0 9 PDB header:transport protein Chain: A: PDB Molecule:cis-aconitate porin opdh; PDBTitle: crystal structure of pseudomonas aeruginosa opdo 44 c2iahA_ not modelled 8.3 13 PDB header:membrane protein Chain: A: PDB Molecule:ferripyoverdine receptor; PDBTitle: crystal structure of the ferripyoverdine receptor of the outer2 membrane of pseudomonas aeruginosa bound to ferripyoverdine. 45 d2j01h2 not modelled 7.9 27 Fold:Ribosomal protein L6 Superfamily:Ribosomal protein L6 Family:Ribosomal protein L6 46 c2zkre_ not modelled 7.1 12 PDB header:ribosomal protein/rna Chain: E: PDB Molecule:rna expansion segment es7 part ii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 47 d2qamg2 not modelled 7.0 46 Fold:Ribosomal protein L6 Superfamily:Ribosomal protein L6 Family:Ribosomal protein L6 48 d2je6i2 not modelled 6.8 20 Fold:Barrel-sandwich hybrid Superfamily:Ribosomal L27 protein-like Family:ECR1 N-terminal domain-like 49 d1osya_ not modelled 6.1 30 Fold:Immunoglobulin-like beta-sandwich Superfamily:Fungal immunomodulatory protein, FIP Family:Fungal immunomodulatory protein, FIP 50 d1opca_ not modelled 6.0 57 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:PhoB-like 51 c1xkhC_ not modelled 5.8 13 PDB header:membrane protein Chain: C: PDB Molecule:ferripyoverdine receptor; PDBTitle: pyoverdine outer membrane receptor fpva from pseudomonas aeruginosa2 pao1 bound to pyoverdine 52 c2e7mA_ not modelled 5.6 27 PDB header:structural protein Chain: A: PDB Molecule:protein kiaa0319; PDBTitle: solution structure of the pkd domain (329-428) from human2 kiaa0319 53 d2zjre1 not modelled 5.6 55 Fold:Ribosomal protein L6 Superfamily:Ribosomal protein L6 Family:Ribosomal protein L6 54 c2hqnA_ not modelled 5.3 50 PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism 55 d1c0ma1 not modelled 5.2 22 Fold:SH3-like barrel Superfamily:DNA-binding domain of retroviral integrase Family:DNA-binding domain of retroviral integrase