Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionP48860
DateTue Jul 17 17:05:10 BST 2012
Unique Job IDdd319d49e640022d

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c1giyJ_
Top template information
PDB header:ribosome
Chain: J: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: crystal structure of the ribosome at 5.5 a resolution. this2 file, 1giy, contains the 50s ribosome subunit. the 30s3 ribosome subunit, three trna, and mrna molecules are in the4 file 1gix
Confidence and coverage
Confidence:100.0% Coverage: 98%
120 residues ( 98% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MANHEQIIEAIKEMSVLELNDLVKAIEEEFGVTAAAPVAVAGAAGGADAAAEKTEFDVEL
Secondary structure 



























SS confidence 



























































Disorder  ???



























????????????????????????




Disorder confidence 



























































 
   .........70.........80.........90.........100.........110.........120
Sequence  TSAGSSKIKVVKAVKEATGLGLKDAKELVDGAPKVIKEALPKEEAEKLKEQLEEVGATVE
Secondary structure 














SS confidence 



























































Disorder 

















???















?

















?


Disorder confidence 



























































 
   ..
Sequence  LK
Secondary structure 
SS confidence 

Disorder  ??
Disorder confidence 

 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 1giy chain J

3D model

Region: 3 - 122
Aligned: 120
Modelled: 120
Confidence: 100.0%
Identity: 62%
PDB header:ribosome
Chain: J: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: crystal structure of the ribosome at 5.5 a resolution. this2 file, 1giy, contains the 50s ribosome subunit. the 30s3 ribosome subunit, three trna, and mrna molecules are in the4 file 1gix

Phyre2

PDB 2gya chain 3

3D model

Region: 3 - 122
Aligned: 118
Modelled: 120
Confidence: 100.0%
Identity: 58%
PDB header:ribosome
Chain: 3: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: structure of the 50s subunit of a pre-translocational e.2 coli ribosome obtained by fitting atomic models for rna and3 protein components into cryo-em map emd-1056

Phyre2

PDB 2ftc chain F

3D model

Region: 3 - 121
Aligned: 119
Modelled: 119
Confidence: 100.0%
Identity: 35%
PDB header:ribosome
Chain: F: PDB Molecule:39s ribosomal protein l12, mitochondrial;
PDBTitle: structural model for the large subunit of the mammalian mitochondrial2 ribosome

Phyre2

PDB 2zjq chain 5 domain 1

3D model

Region: 51 - 122
Aligned: 71
Modelled: 72
Confidence: 99.9%
Identity: 58%
Fold: ClpS-like
Superfamily: ClpS-like
Family: Ribosomal protein L7/12, C-terminal domain

Phyre2

PDB 2zjq chain 5

3D model

Region: 51 - 122
Aligned: 71
Modelled: 72
Confidence: 99.9%
Identity: 58%
PDB header:ribosome
Chain: 5: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: interaction of l7 with l11 induced by microccocin binding2 to the deinococcus radiodurans 50s subunit

Phyre2

PDB 1ctf chain A

3D model

Region: 55 - 122
Aligned: 68
Modelled: 68
Confidence: 99.9%
Identity: 59%
Fold: ClpS-like
Superfamily: ClpS-like
Family: Ribosomal protein L7/12, C-terminal domain

Phyre2

PDB 1dd3 chain A domain 2

3D model

Region: 55 - 122
Aligned: 68
Modelled: 68
Confidence: 99.9%
Identity: 62%
Fold: ClpS-like
Superfamily: ClpS-like
Family: Ribosomal protein L7/12, C-terminal domain

Phyre2

PDB 1dd3 chain A domain 1

3D model

Region: 4 - 54
Aligned: 51
Modelled: 51
Confidence: 99.0%
Identity: 55%
Fold: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Superfamily: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Family: Ribosomal protein L7/12, oligomerisation (N-terminal) domain

Phyre2

PDB 1dd4 chain D

3D model

Region: 4 - 41
Aligned: 38
Modelled: 38
Confidence: 98.3%
Identity: 63%
Fold: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Superfamily: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Family: Ribosomal protein L7/12, oligomerisation (N-terminal) domain

Phyre2

PDB 1dd4 chain C

3D model

Region: 4 - 36
Aligned: 33
Modelled: 33
Confidence: 97.8%
Identity: 58%
Fold: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Superfamily: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Family: Ribosomal protein L7/12, oligomerisation (N-terminal) domain

Phyre2

PDB 2gyc chain 3 domain 1

3D model

Region: 4 - 48
Aligned: 45
Modelled: 45
Confidence: 97.5%
Identity: 51%
Fold: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Superfamily: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Family: Ribosomal protein L7/12, oligomerisation (N-terminal) domain

Phyre2

PDB 1dd3 chain C

3D model

Region: 4 - 33
Aligned: 30
Modelled: 30
Confidence: 97.5%
Identity: 53%
PDB header:ribosome
Chain: C: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: crystal structure of ribosomal protein l12 from thermotoga maritima

Phyre2

PDB 1dd3 chain D

3D model

Region: 4 - 33
Aligned: 30
Modelled: 30
Confidence: 97.5%
Identity: 53%
PDB header:ribosome
Chain: D: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: crystal structure of ribosomal protein l12 from thermotoga maritima

Phyre2

PDB 1rqt chain B

3D model

Region: 4 - 37
Aligned: 34
Modelled: 34
Confidence: 97.0%
Identity: 53%
PDB header:ribosome
Chain: B: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: nmr structure of dimeric n-terminal domain of ribosomal2 protein l7 from e.coli

Phyre2

PDB 1rqt chain A

3D model

Region: 4 - 37
Aligned: 34
Modelled: 34
Confidence: 97.0%
Identity: 53%
Fold: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Superfamily: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Family: Ribosomal protein L7/12, oligomerisation (N-terminal) domain

Phyre2

PDB 1rqt chain A

3D model

Region: 4 - 37
Aligned: 34
Modelled: 34
Confidence: 97.0%
Identity: 53%
PDB header:ribosome
Chain: A: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: nmr structure of dimeric n-terminal domain of ribosomal2 protein l7 from e.coli

Phyre2

PDB 1zaw chain U

3D model

Region: 4 - 31
Aligned: 28
Modelled: 28
Confidence: 97.0%
Identity: 50%
PDB header:structural protein
Chain: U: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form a

Phyre2

PDB 1zaw chain W

3D model

Region: 4 - 31
Aligned: 28
Modelled: 28
Confidence: 97.0%
Identity: 50%
PDB header:structural protein
Chain: W: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form a

Phyre2

PDB 1zav chain W

3D model

Region: 4 - 31
Aligned: 28
Modelled: 28
Confidence: 97.0%
Identity: 50%
PDB header:structural protein
Chain: W: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p21

Phyre2

PDB 1zav chain U

3D model

Region: 4 - 31
Aligned: 28
Modelled: 28
Confidence: 97.0%
Identity: 50%
PDB header:structural protein
Chain: U: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p21

Phyre2
1

c1giyJ_
2

c2gya3_
3

c2ftcF_
4

d2zjq51
5

c2zjq5_
6

d1ctfa_
7

d1dd3a2
8

d1dd3a1
9

d1dd4d_
10

d1dd4c_
11

d2gyc31
12

c1dd3C_
13

c1dd3D_
14

c1rqtB_
15

d1rqta_
16

c1rqtA_
17

c1zawU_
18

c1zawW_
19

c1zavW_
20

c1zavU_
21



22



23



24



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28



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32



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49



50



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61



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65



66



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74



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81






Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1giyJ_



100.0 62 PDB header:ribosome
Chain: J: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: crystal structure of the ribosome at 5.5 a resolution. this2 file, 1giy, contains the 50s ribosome subunit. the 30s3 ribosome subunit, three trna, and mrna molecules are in the4 file 1gix
2c2gya3_



100.0 58 PDB header:ribosome
Chain: 3: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: structure of the 50s subunit of a pre-translocational e.2 coli ribosome obtained by fitting atomic models for rna and3 protein components into cryo-em map emd-1056
3c2ftcF_



100.0 35 PDB header:ribosome
Chain: F: PDB Molecule:39s ribosomal protein l12, mitochondrial;
PDBTitle: structural model for the large subunit of the mammalian mitochondrial2 ribosome
4d2zjq51



99.9 58 Fold:ClpS-like
Superfamily:ClpS-like
Family:Ribosomal protein L7/12, C-terminal domain
5c2zjq5_



99.9 58 PDB header:ribosome
Chain: 5: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: interaction of l7 with l11 induced by microccocin binding2 to the deinococcus radiodurans 50s subunit
6d1ctfa_



99.9 59 Fold:ClpS-like
Superfamily:ClpS-like
Family:Ribosomal protein L7/12, C-terminal domain
7d1dd3a2



99.9 62 Fold:ClpS-like
Superfamily:ClpS-like
Family:Ribosomal protein L7/12, C-terminal domain
8d1dd3a1



99.0 55 Fold:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Superfamily:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Family:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
9d1dd4d_



98.3 63 Fold:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Superfamily:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Family:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
10d1dd4c_



97.8 58 Fold:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Superfamily:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Family:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
11d2gyc31



97.5 51 Fold:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Superfamily:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Family:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
12c1dd3C_



97.5 53 PDB header:ribosome
Chain: C: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: crystal structure of ribosomal protein l12 from thermotoga maritima
13c1dd3D_



97.5 53 PDB header:ribosome
Chain: D: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: crystal structure of ribosomal protein l12 from thermotoga maritima
14c1rqtB_



97.0 53 PDB header:ribosome
Chain: B: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: nmr structure of dimeric n-terminal domain of ribosomal2 protein l7 from e.coli
15d1rqta_



97.0 53 Fold:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Superfamily:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Family:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
16c1rqtA_



97.0 53 PDB header:ribosome
Chain: A: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: nmr structure of dimeric n-terminal domain of ribosomal2 protein l7 from e.coli
17c1zawU_



97.0 50 PDB header:structural protein
Chain: U: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form a
18c1zawW_



97.0 50 PDB header:structural protein
Chain: W: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form a
19c1zavW_



97.0 50 PDB header:structural protein
Chain: W: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p21
20c1zavU_



97.0 50 PDB header:structural protein
Chain: U: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p21
21c1zaxU_



not modelled 97.0 50 PDB header:structural protein
Chain: U: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form b
22d1zavu1



not modelled 97.0 50 Fold:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Superfamily:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Family:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
23c1zaxW_



not modelled 97.0 50 PDB header:structural protein
Chain: W: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form b
24c1zaxV_



not modelled 97.0 50 PDB header:structural protein
Chain: V: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form b
25c1zavV_



not modelled 96.9 50 PDB header:structural protein
Chain: V: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p21
26c1zawV_



not modelled 96.9 50 PDB header:structural protein
Chain: V: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form a
27c1zaxZ_



not modelled 96.8 50 PDB header:structural protein
Chain: Z: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form b
28c1zavY_



not modelled 96.3 48 PDB header:structural protein
Chain: Y: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p21
29c1zaxX_



not modelled 96.3 48 PDB header:structural protein
Chain: X: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form b
30c1zavX_



not modelled 96.3 48 PDB header:structural protein
Chain: X: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p21
31c1zaxY_



not modelled 96.3 48 PDB header:structural protein
Chain: Y: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form b
32c1zawX_



not modelled 96.1 48 PDB header:structural protein
Chain: X: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form a
33c1zawY_



not modelled 96.1 48 PDB header:structural protein
Chain: Y: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form a
34c1zavZ_



not modelled 94.0 46 PDB header:structural protein
Chain: Z: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p21
35d1zavz1



not modelled 94.0 46 Fold:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Superfamily:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Family:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
36c1zawZ_



not modelled 93.8 46 PDB header:structural protein
Chain: Z: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form a
37d1aipc1



not modelled 77.3 37 Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:TS-N domain
38c1aipG_



not modelled 68.3 37 PDB header:complex of two elongation factors
Chain: G: PDB Molecule:elongation factor ts;
PDBTitle: ef-tu ef-ts complex from thermus thermophilus
39d1efub3



not modelled 66.1 36 Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:TS-N domain
40d1xb2b1



not modelled 60.7 12 Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:TS-N domain
41d2cp9a1



not modelled 56.5 14 Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:TS-N domain
42c1xb2B_



not modelled 53.9 13 PDB header:translation
Chain: B: PDB Molecule:elongation factor ts, mitochondrial;
PDBTitle: crystal structure of bos taurus mitochondrial elongation2 factor tu/ts complex
43c1efuB_



not modelled 43.2 29 PDB header:complex (two elongation factors)
Chain: B: PDB Molecule:elongation factor ts;
PDBTitle: elongation factor complex ef-tu/ef-ts from escherichia coli
44c3mmpC_



not modelled 30.1 32 PDB header:transferase
Chain: C: PDB Molecule:elongation factor tu 2, elongation factor ts;
PDBTitle: structure of the qb replicase, an rna-dependent rna polymerase2 consisting of viral and host proteins
45d1mula_



not modelled 25.2 23 Fold:IHF-like DNA-binding proteins
Superfamily:IHF-like DNA-binding proteins
Family:Prokaryotic DNA-bending protein
46c2iifA_



not modelled 24.9 35 PDB header:recombination/dna
Chain: A: PDB Molecule:integration host factor;
PDBTitle: single chain integration host factor mutant protein (scihf2-2 k45ae) in complex with dna
47c4a1cK_



not modelled 24.7 19 PDB header:ribosome
Chain: K: PDB Molecule:60s ribosomal protein l27a;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 4.
48c2jmlA_



not modelled 23.1 22 PDB header:transcription
Chain: A: PDB Molecule:dna binding domain/transcriptional regulator;
PDBTitle: solution structure of the n-terminal domain of cara repressor
49d1vqol1



not modelled 18.6 44 Fold:Ribosomal proteins L15p and L18e
Superfamily:Ribosomal proteins L15p and L18e
Family:Ribosomal proteins L15p and L18e
50d1in0a2



not modelled 17.0 20 Fold:Ferredoxin-like
Superfamily:YajQ-like
Family:YajQ-like
51c2zkrl_



not modelled 14.8 25 PDB header:ribosomal protein/rna
Chain: L: PDB Molecule:rna expansion segment es20;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
52d1p71a_



not modelled 14.5 28 Fold:IHF-like DNA-binding proteins
Superfamily:IHF-like DNA-binding proteins
Family:Prokaryotic DNA-bending protein
53c2dt5A_



not modelled 13.5 19 PDB header:dna binding protein
Chain: A: PDB Molecule:at-rich dna-binding protein;
PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8
54d2axtu1



not modelled 11.9 30 Fold:SAM domain-like
Superfamily:PsbU/PolX domain-like
Family:PsbU-like
55d2j01p1



not modelled 10.8 25 Fold:Ribosomal proteins L15p and L18e
Superfamily:Ribosomal proteins L15p and L18e
Family:Ribosomal proteins L15p and L18e
56d2zjri1



not modelled 10.4 25 Fold:Ribosomal proteins L15p and L18e
Superfamily:Ribosomal proteins L15p and L18e
Family:Ribosomal proteins L15p and L18e
57c3izct_



not modelled 10.2 25 PDB header:ribosome
Chain: T: PDB Molecule:60s ribosomal protein rpl19 (l19e);
PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
58d1b8za_



not modelled 10.0 27 Fold:IHF-like DNA-binding proteins
Superfamily:IHF-like DNA-binding proteins
Family:Prokaryotic DNA-bending protein
59d1spbp_



not modelled 9.9 27 Fold:Ferredoxin-like
Superfamily:Protease propeptides/inhibitors
Family:Subtilase propeptides/inhibitors
60c2l9fA_



not modelled 9.8 18 PDB header:transferase
Chain: A: PDB Molecule:cale8;
PDBTitle: nmr solution structure of meacp
61c1in0B_



not modelled 9.2 20 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:yajq protein;
PDBTitle: yajq protein (hi1034)
62d1v5ib1



not modelled 8.8 16 Fold:Ferredoxin-like
Superfamily:Protease propeptides/inhibitors
Family:Subtilase propeptides/inhibitors
63c2jw5A_



not modelled 8.6 20 PDB header:protein binding
Chain: A: PDB Molecule:dna polymerase lambda;
PDBTitle: polymerase lambda brct domain
64d1huua_



not modelled 8.4 43 Fold:IHF-like DNA-binding proteins
Superfamily:IHF-like DNA-binding proteins
Family:Prokaryotic DNA-bending protein
65d1y7ta2



not modelled 7.7 17 Fold:LDH C-terminal domain-like
Superfamily:LDH C-terminal domain-like
Family:Lactate & malate dehydrogenases, C-terminal domain
66d1szpa1



not modelled 7.6 21 Fold:SAM domain-like
Superfamily:Rad51 N-terminal domain-like
Family:DNA repair protein Rad51, N-terminal domain
67c3c4iA_



not modelled 7.4 18 PDB header:dna binding protein
Chain: A: PDB Molecule:dna-binding protein hu homolog;
PDBTitle: crystal structure analysis of n terminal region containing the2 dimerization domain and dna binding domain of hu protein(histone like3 protein-dna binding) from mycobacterium tuberculosis [h37rv]
68c3iz5t_



not modelled 6.8 31 PDB header:ribosome
Chain: T: PDB Molecule:60s ribosomal protein l19 (l19e);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
69d1lghb_



not modelled 6.5 21 Fold:Light-harvesting complex subunits
Superfamily:Light-harvesting complex subunits
Family:Light-harvesting complex subunits
70d2o8ra3



not modelled 6.4 21 Fold:Phospholipase D/nuclease
Superfamily:Phospholipase D/nuclease
Family:Polyphosphate kinase C-terminal domain
71d2okga1



not modelled 6.3 21 Fold:NagB/RpiA/CoA transferase-like
Superfamily:NagB/RpiA/CoA transferase-like
Family:SorC sugar-binding domain-like
72c2fvfA_



not modelled 5.7 33 PDB header:biosynthetic protein
Chain: A: PDB Molecule:acyl carrier protein;
PDBTitle: structure of 10:0-acp (protein with docked fatty acid)
73d1scjb_



not modelled 5.7 23 Fold:Ferredoxin-like
Superfamily:Protease propeptides/inhibitors
Family:Subtilase propeptides/inhibitors
74d1iqoa_



not modelled 5.7 36 Fold:Hypothetical protein MTH1880
Superfamily:Hypothetical protein MTH1880
Family:Hypothetical protein MTH1880
75d1wh4a_



not modelled 5.6 7 Fold:DEATH domain
Superfamily:DEATH domain
Family:DEATH domain, DD
76c3a1yF_



not modelled 5.5 40 PDB header:ribosomal protein
Chain: F: PDB Molecule:50s ribosomal protein p1 (l12p);
PDBTitle: the structure of protein complex
77c2lbfA_



not modelled 5.4 25 PDB header:ribosomal protein
Chain: A: PDB Molecule:60s acidic ribosomal protein p1;
PDBTitle: solution structure of the dimerization domain of human ribosomal2 protein p1/p2 heterodimer
78d2paga1



not modelled 5.3 30 Fold:SMI1/KNR4-like
Superfamily:SMI1/KNR4-like
Family:SMI1/KNR4-like
79d1e0ea_



not modelled 5.3 17 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:N-terminal Zn binding domain of HIV integrase
Family:N-terminal Zn binding domain of HIV integrase
80c3d6zA_



not modelled 5.3 22 PDB header:transcription regulator/dna
Chain: A: PDB Molecule:multidrug-efflux transporter 1 regulator;
PDBTitle: crystal structure of r275e mutant of bmrr bound to dna and rhodamine
81d1nxha_



not modelled 5.3 32 Fold:Hypothetical protein MTH393
Superfamily:Hypothetical protein MTH393
Family:Hypothetical protein MTH393

Binding site prediction 

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If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite