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| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
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| Fold library id | PDB Header | Molecule | Title |
|---|---|---|---|
| c4a1cK_ | PDB header: ribosome | Chain: K: PDB Molecule: 60s ribosomal protein l27a; | PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 4. |
| Added to library: Sat Dec 3 17:39:29 2011 | |
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| Links to external resources | |
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|   | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
| Sequence | V | S | H | L | K | K | T | R | K | L | R | G | H | V | S | H | G | H | G | R | V | G | K | H | R | K | G | G | C | R | G | G | R | G | K | A | G | G | M | H | H | H | R | I | L | M | E | K | W | H | P | G | Y | Y | G | K | L | G | M | R | T | F | H | L | K | K | N | P | L | H |
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | G | G | G | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | S | S | T | T | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | T | S | S | T | T | T | T | T | T | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | T | T | S | S | S | S | S | G | G | G |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
| Sequence | C | P | V | V | N | I | D | K | L | W | S | L | V | S | D | A | T | R | Q | K | Y | A | E | D | K | K | K | V | P | V | I | D | V | T | K | A | G | F | F | K | V | L | G | K | G | R | L | P | N | Q | P | V | V | V | K | A | K | Y | F | S | K | T | A | E | R | R | I | V | A | V |
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | ![]() | ![]() | ![]() | G | G | G | ![]() | ![]() | ![]() | ![]() | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | T | G | G | G | T | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T |   | . | . | . | . | . | . | . | . | ||||||||
| Sequence | G | G | A | C | V | L | T | A | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | T | ![]() | ![]() | ![]() | ![]() |
| Download: | PDB structure | FASTA sequence |
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