PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1giyJ_

Fold library id	PDB Header	Molecule	Title
c1giyJ_	PDB header: ribosome	Chain: J: PDB Molecule: 50s ribosomal protein l7/l12;	PDBTitle: crystal structure of the ribosome at 5.5 a resolution. this2 file, 1giy, contains the 50s ribosome subunit. the 30s3 ribosome subunit, three trna, and mrna molecules are in the4 file 1gix

Links to external resources
Added to library: Tue Mar 16 12:35:37 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M T I D E I I E A I E K L T V S E L A E L V K K L E D K F G V T A A A P V A V A A A P V A G A A A G A A Q E E K T E F D V V L K S F G Q N K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T S T S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . .

Sequence I Q V I K V V R E I T G L G L K E A K D L V E K A G S P D A V I K S G V S K E E A E E I K K K L E E A G A E V E L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S T T
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	T	I	D	E	I	I	E	A	I	E	K	L	T	V	S	E	L	A	E	L	V	K	K	L	E	D	K	F	G	V	T	A	A	A	P	V	A	V	A	A	A	P	V	A	G	A	A	A	G	A	A	Q	E	E	K	T	E	F	D	V	V	L	K	S	F	G	Q	N	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S																		T	T	T	S																						T	S	S									T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Sequence	I	Q	V	I	K	V	V	R	E	I	T	G	L	G	L	K	E	A	K	D	L	V	E	K	A	G	S	P	D	A	V	I	K	S	G	V	S	K	E	E	A	E	E	I	K	K	K	L	E	E	A	G	A	E	V	E	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T	T	T	S	T	T																					T	T	T