Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionP02976
DateTue Jul 17 17:05:03 BST 2012
Unique Job ID85d469624602092c

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template d1gjsa_
Top template information
Fold:immunoglobulin/albumin-binding domain-like
Superfamily:Bacterial immunoglobulin/albumin-binding domains
Family:GA module, an albumin-binding domain
Confidence and coverage
Confidence: 90.4% Coverage: 10%
54 residues ( 10% of your sequence) have been modelled with 90.4% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Warning: 88% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MKKKNIYSIRKLGVGIASVTLGTLLISGGVTPAANAAQHDEAQQNAFYQVLNMPNLNADQ
Secondary structure 
SS confidence 
Disorder  ???????
?
??
???????
?????????
????????
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  RNGFIQSLKDDPSQSANVLGEAQKLNDSQAPKADAQQNNFNKDQQSAFYEILNMPNLNEA
Secondary structure 
SS confidence 
Disorder  ????????????????????????????????????????????????
?????????
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  QRNGFIQSLKDDPSQSTNVLGEAKKLNESQAPKADNNFNKEQQNAFYEILNMPNLNEEQR
Secondary structure 
SS confidence 
Disorder 
??
????????????
??
????????????????????????????????
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  NGFIQSLKDDPSQSANLLSEAKKLNESQAPKADNKFNKEQQNAFYEILHLPNLNEEQRNG
Secondary structure 
SS confidence 
Disorder  ????????????????????????????????????????????
??????????????
Disorder confidence 
 
   .........250.........260.........270.........280.........290.........300
Sequence  FIQSLKDDPSQSANLLAEAKKLNDAQAPKADNKFNKEQQNAFYEILHLPNLTEEQRNGFI
Secondary structure 
SS confidence 
Disorder  ????????????????????????????????????????????????????????????
Disorder confidence 
 
   .........310.........320.........330.........340.........350.........360
Sequence  QSLKDDPSVSKEILAEAKKLNDAQAPKEEDNNKPGKEDNNKPGKEDNNKPGKEDNNKPGK
Secondary structure 
SS confidence 
Disorder  ????????????????????????????????????????????????????????????
Disorder confidence 
 
   .........370.........380.........390.........400.........410.........420
Sequence  EDNNKPGKEDGNKPGKEDNKKPGKEDGNKPGKEDNKKPGKEDGNKPGKEDGNKPGKEDGN
Secondary structure 
SS confidence 
Disorder  ????????????????????????????????????????????????????????????
Disorder confidence 
 
   .........430.........440.........450.........460.........470.........480
Sequence  GVHVVKPGDTVNDIAKANGTTADKIAADNKLADKNMIKPGQELVVDKKQPANHADANKAQ
Secondary structure 
SS confidence 
Disorder  ????????????????????????????????????????????????????????????
Disorder confidence 
 
   .........490.........500.........510......
Sequence  ALPETGEENPFIGTTVFGGLSLALGAALLAGRRREL
Secondary structure 
SS confidence 
Disorder  ????????????
???????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 1gjs chain A

3D model

Region: 166 - 219
Aligned: 54
Modelled: 54
Confidence: 90.4%
Identity: 9%
Fold: immunoglobulin/albumin-binding domain-like
Superfamily: Bacterial immunoglobulin/albumin-binding domains
Family: GA module, an albumin-binding domain

Phyre2

PDB 2fs1 chain A

3D model

Region: 169 - 219
Aligned: 46
Modelled: 51
Confidence: 88.7%
Identity: 9%
PDB header:protein binding
Chain: A: PDB Molecule:psd-1;
PDBTitle: solution structure of psd-1

Phyre2

PDB 1edl chain A

3D model

Region: 37 - 92
Aligned: 56
Modelled: 56
Confidence: 87.4%
Identity: 100%
Fold: immunoglobulin/albumin-binding domain-like
Superfamily: Bacterial immunoglobulin/albumin-binding domains
Family: Immunoglobulin-binding protein A modules

Phyre2

PDB 2jp3 chain A

3D model

Region: 492 - 513
Aligned: 22
Modelled: 22
Confidence: 84.7%
Identity: 36%
PDB header:transcription
Chain: A: PDB Molecule:fxyd domain-containing ion transport regulator 4;
PDBTitle: solution structure of the human fxyd4 (chif) protein in sds2 micelles

Phyre2

PDB 2jo1 chain A

3D model

Region: 492 - 513
Aligned: 22
Modelled: 22
Confidence: 83.7%
Identity: 36%
PDB header:hydrolase regulator
Chain: A: PDB Molecule:phospholemman;
PDBTitle: structure of the na,k-atpase regulatory protein fxyd1 in2 micelles

Phyre2

PDB 1lp1 chain A

3D model

Region: 40 - 92
Aligned: 53
Modelled: 53
Confidence: 83.6%
Identity: 55%
Fold: immunoglobulin/albumin-binding domain-like
Superfamily: Bacterial immunoglobulin/albumin-binding domains
Family: Immunoglobulin-binding protein A modules

Phyre2

PDB 2jwd chain A domain 1

3D model

Region: 40 - 92
Aligned: 53
Modelled: 53
Confidence: 75.8%
Identity: 74%
Fold: immunoglobulin/albumin-binding domain-like
Superfamily: Bacterial immunoglobulin/albumin-binding domains
Family: Immunoglobulin-binding protein A modules

Phyre2

PDB 3kdp chain H

3D model

Region: 493 - 513
Aligned: 21
Modelled: 21
Confidence: 74.1%
Identity: 29%
PDB header:hydrolase
Chain: H: PDB Molecule:na+/k+ atpase gamma subunit transcript variant a;
PDBTitle: crystal structure of the sodium-potassium pump

Phyre2

PDB 3kdp chain G

3D model

Region: 493 - 513
Aligned: 21
Modelled: 21
Confidence: 74.1%
Identity: 29%
PDB header:hydrolase
Chain: G: PDB Molecule:na+/k+ atpase gamma subunit transcript variant a;
PDBTitle: crystal structure of the sodium-potassium pump

Phyre2

PDB 1lp1 chain B

3D model

Region: 40 - 91
Aligned: 52
Modelled: 52
Confidence: 70.0%
Identity: 73%
Fold: immunoglobulin/albumin-binding domain-like
Superfamily: Bacterial immunoglobulin/albumin-binding domains
Family: Immunoglobulin-binding protein A modules

Phyre2

PDB 1dee chain G

3D model

Region: 43 - 92
Aligned: 50
Modelled: 50
Confidence: 65.6%
Identity: 84%
Fold: immunoglobulin/albumin-binding domain-like
Superfamily: Bacterial immunoglobulin/albumin-binding domains
Family: Immunoglobulin-binding protein A modules

Phyre2

PDB 1ppj chain W

3D model

Region: 6 - 26
Aligned: 21
Modelled: 21
Confidence: 55.2%
Identity: 14%
Fold: Single transmembrane helix
Superfamily: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Family: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)

Phyre2

PDB 3cx5 chain I domain 1

3D model

Region: 6 - 26
Aligned: 21
Modelled: 21
Confidence: 48.8%
Identity: 10%
Fold: Single transmembrane helix
Superfamily: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Family: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)

Phyre2

PDB 1fc2 chain C

3D model

Region: 40 - 78
Aligned: 39
Modelled: 39
Confidence: 47.6%
Identity: 74%
Fold: immunoglobulin/albumin-binding domain-like
Superfamily: Bacterial immunoglobulin/albumin-binding domains
Family: Immunoglobulin-binding protein A modules

Phyre2

PDB 2zxe chain G

3D model

Region: 492 - 513
Aligned: 22
Modelled: 22
Confidence: 46.2%
Identity: 9%
PDB header:hydrolase/transport protein
Chain: G: PDB Molecule:phospholemman-like protein;
PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state

Phyre2

PDB 2ari chain A

3D model

Region: 493 - 510
Aligned: 18
Modelled: 18
Confidence: 43.4%
Identity: 28%
PDB header:viral protein
Chain: A: PDB Molecule:envelope polyprotein gp160;
PDBTitle: solution structure of micelle-bound fusion domain of hiv-12 gp41

Phyre2

PDB 2k1l chain B

3D model

Region: 485 - 513
Aligned: 29
Modelled: 29
Confidence: 41.1%
Identity: 31%
PDB header:signaling protein
Chain: B: PDB Molecule:ephrin type-a receptor 1;
PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 6.3

Phyre2

PDB 2k1l chain A

3D model

Region: 485 - 513
Aligned: 29
Modelled: 29
Confidence: 41.1%
Identity: 31%
PDB header:signaling protein
Chain: A: PDB Molecule:ephrin type-a receptor 1;
PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 6.3

Phyre2

PDB 2k1k chain A

3D model

Region: 485 - 513
Aligned: 29
Modelled: 29
Confidence: 41.1%
Identity: 31%
PDB header:signaling protein
Chain: A: PDB Molecule:ephrin type-a receptor 1;
PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 4.3

Phyre2

PDB 2k1k chain B

3D model

Region: 485 - 513
Aligned: 29
Modelled: 29
Confidence: 41.1%
Identity: 31%
PDB header:signaling protein
Chain: B: PDB Molecule:ephrin type-a receptor 1;
PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 4.3

Phyre2
1
d1gjsa_
2
c2fs1A_
3
d1edla_
4
c2jp3A_
5
c2jo1A_
6
d1lp1a_
7
d2jwda1
8
c3kdpH_
9
c3kdpG_
10
d1lp1b_
11
d1deeg_
12
d1ppjw_
13
d3cx5i1
14
d1fc2c_
15
c2zxeG_
16
c2ariA_
17
c2k1lB_
18
c2k1lA_
19
c2k1kA_
20
c2k1kB_
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
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84
85
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87
88



Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1gjsa_
90.4 9 Fold:immunoglobulin/albumin-binding domain-like
Superfamily:Bacterial immunoglobulin/albumin-binding domains
Family:GA module, an albumin-binding domain
2c2fs1A_
88.7 9 PDB header:protein binding
Chain: A: PDB Molecule:psd-1;
PDBTitle: solution structure of psd-1
3d1edla_
87.4 100 Fold:immunoglobulin/albumin-binding domain-like
Superfamily:Bacterial immunoglobulin/albumin-binding domains
Family:Immunoglobulin-binding protein A modules
4c2jp3A_
84.7 36 PDB header:transcription
Chain: A: PDB Molecule:fxyd domain-containing ion transport regulator 4;
PDBTitle: solution structure of the human fxyd4 (chif) protein in sds2 micelles
5c2jo1A_
83.7 36 PDB header:hydrolase regulator
Chain: A: PDB Molecule:phospholemman;
PDBTitle: structure of the na,k-atpase regulatory protein fxyd1 in2 micelles
6d1lp1a_
83.6 55 Fold:immunoglobulin/albumin-binding domain-like
Superfamily:Bacterial immunoglobulin/albumin-binding domains
Family:Immunoglobulin-binding protein A modules
7d2jwda1
75.8 74 Fold:immunoglobulin/albumin-binding domain-like
Superfamily:Bacterial immunoglobulin/albumin-binding domains
Family:Immunoglobulin-binding protein A modules
8c3kdpH_
74.1 29 PDB header:hydrolase
Chain: H: PDB Molecule:na+/k+ atpase gamma subunit transcript variant a;
PDBTitle: crystal structure of the sodium-potassium pump
9c3kdpG_
74.1 29 PDB header:hydrolase
Chain: G: PDB Molecule:na+/k+ atpase gamma subunit transcript variant a;
PDBTitle: crystal structure of the sodium-potassium pump
10d1lp1b_
70.0 73 Fold:immunoglobulin/albumin-binding domain-like
Superfamily:Bacterial immunoglobulin/albumin-binding domains
Family:Immunoglobulin-binding protein A modules
11d1deeg_
65.6 84 Fold:immunoglobulin/albumin-binding domain-like
Superfamily:Bacterial immunoglobulin/albumin-binding domains
Family:Immunoglobulin-binding protein A modules
12d1ppjw_
55.2 14 Fold:Single transmembrane helix
Superfamily:Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Family:Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
13d3cx5i1
48.8 10 Fold:Single transmembrane helix
Superfamily:Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Family:Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
14d1fc2c_
47.6 74 Fold:immunoglobulin/albumin-binding domain-like
Superfamily:Bacterial immunoglobulin/albumin-binding domains
Family:Immunoglobulin-binding protein A modules
15c2zxeG_
46.2 9 PDB header:hydrolase/transport protein
Chain: G: PDB Molecule:phospholemman-like protein;
PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state
16c2ariA_
43.4 28 PDB header:viral protein
Chain: A: PDB Molecule:envelope polyprotein gp160;
PDBTitle: solution structure of micelle-bound fusion domain of hiv-12 gp41
17c2k1lB_
41.1 31 PDB header:signaling protein
Chain: B: PDB Molecule:ephrin type-a receptor 1;
PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 6.3
18c2k1lA_
41.1 31 PDB header:signaling protein
Chain: A: PDB Molecule:ephrin type-a receptor 1;
PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 6.3
19c2k1kA_
41.1 31 PDB header:signaling protein
Chain: A: PDB Molecule:ephrin type-a receptor 1;
PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 4.3
20c2k1kB_
41.1 31 PDB header:signaling protein
Chain: B: PDB Molecule:ephrin type-a receptor 1;
PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 4.3
21c3n23E_
not modelled 35.4 20 PDB header:hydrolase
Chain: E: PDB Molecule:na+/k+ atpase gamma subunit transcript variant a;
PDBTitle: crystal structure of the high affinity complex between ouabain and the2 e2p form of the sodium-potassium pump
22c2j5dA_
not modelled 30.3 26 PDB header:membrane protein
Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting
PDBTitle: nmr structure of bnip3 transmembrane domain in lipid2 bicelles
23c2lonA_
not modelled 21.6 16 PDB header:membrane protein
Chain: A: PDB Molecule:hig1 domain family member 1b;
PDBTitle: backbone structure of human membrane protein higd1b
24c1spfA_
not modelled 18.3 44 PDB header:lipoprotein(surface film)
Chain: A: PDB Molecule:pulmonary surfactant-associated polypeptide c;
PDBTitle: the nmr structure of the pulmonary surfactant-associated2 polypeptide sp-c in an apolar solvent contains a valyl-3 rich alpha-helix
25c2ka2A_
not modelled 18.2 27 PDB header:membrane protein
Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting
PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles with his173-ser172 intermonomer3 hydrogen bond restraints
26c2ka1B_
not modelled 18.2 27 PDB header:membrane protein
Chain: B: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting
PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles
27c2ka1A_
not modelled 18.2 27 PDB header:membrane protein
Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting
PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles
28c2ka2B_
not modelled 18.2 27 PDB header:membrane protein
Chain: B: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting
PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles with his173-ser172 intermonomer3 hydrogen bond restraints
29c2ks1B_
not modelled 17.9 41 PDB header:transferase
Chain: B: PDB Molecule:epidermal growth factor receptor;
PDBTitle: heterodimeric association of transmembrane domains of erbb1 and erbb22 receptors enabling kinase activation
30d2j5ya1
not modelled 17.6 15 Fold:immunoglobulin/albumin-binding domain-like
Superfamily:Bacterial immunoglobulin/albumin-binding domains
Family:GA module, an albumin-binding domain
31c1zdbA_
not modelled 15.4 54 PDB header:igg binding domain
Chain: A: PDB Molecule:mini protein a domain, z38;
PDBTitle: phage-selected mini protein a domain, z38, nmr, minimized2 mean structure
32c3g2eA_
not modelled 15.3 32 PDB header:oxidoreductase
Chain: A: PDB Molecule:oorc subunit of 2-oxoglutarate:acceptor oxidoreductase;
PDBTitle: structure of putative oorc subunit of 2-oxoglutarate:acceptor2 oxidoreductase from campylobacter jejuni
33c3of4A_
not modelled 15.3 10 PDB header:oxidoreductase
Chain: A: PDB Molecule:nitroreductase;
PDBTitle: crystal structure of a fmn/fad- and nad(p)h-dependent nitroreductase2 (nfnb, il2077) from idiomarina loihiensis l2tr at 1.90 a resolution
34c2y69Z_
not modelled 14.2 30 PDB header:electron transport
Chain: Z: PDB Molecule:cytochrome c oxidase polypeptide 8h;
PDBTitle: bovine heart cytochrome c oxidase re-refined with molecular2 oxygen
35d2frea1
not modelled 11.0 20 Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
36c2k9yA_
not modelled 10.2 31 PDB header:transferase
Chain: A: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: epha2 dimeric structure in the lipidic bicelle at ph 5.0
37c2k9yB_
not modelled 10.2 31 PDB header:transferase
Chain: B: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: epha2 dimeric structure in the lipidic bicelle at ph 5.0
38c2kluA_
not modelled 9.5 25 PDB header:immune system, membrane protein
Chain: A: PDB Molecule:t-cell surface glycoprotein cd4;
PDBTitle: nmr structure of the transmembrane and cytoplasmic domains2 of human cd4
39d1bkja_
not modelled 9.3 40 Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
40d1f5va_
not modelled 9.2 30 Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
41c3eofB_
not modelled 9.1 50 PDB header:oxidoreductase
Chain: B: PDB Molecule:putative oxidoreductase;
PDBTitle: crystal structure of putative oxidoreductase (yp_213212.1) from2 bacteroides fragilis nctc 9343 at 1.99 a resolution
42c2h0uA_
not modelled 8.8 11 PDB header:oxidoreductase
Chain: A: PDB Molecule:nadph-flavin oxidoreductase;
PDBTitle: crystal structure of nad(p)h-flavin oxidoreductase from helicobacter2 pylori
43d2igga_
not modelled 8.7 5 Fold:beta-Grasp (ubiquitin-like)
Superfamily:Immunoglobulin-binding domains
Family:Immunoglobulin-binding domains
44c2e76D_
not modelled 8.6 17 PDB header:photosynthesis
Chain: D: PDB Molecule:cytochrome b6-f complex iron-sulfur subunit;
PDBTitle: crystal structure of the cytochrome b6f complex with tridecyl-2 stigmatellin (tds) from m.laminosus
45c3n2sD_
not modelled 8.5 40 PDB header:oxidoreductase
Chain: D: PDB Molecule:nadph-dependent nitro/flavin reductase;
PDBTitle: structure of nfra1 nitroreductase from b. subtilis
46c2wqfA_
not modelled 8.5 40 PDB header:oxidoreductase
Chain: A: PDB Molecule:copper induced nitroreductase d;
PDBTitle: crystal structure of the nitroreductase cind from2 lactococcus lactis in complex with fmn
47d1v54m_
not modelled 8.1 27 Fold:Single transmembrane helix
Superfamily:Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
Family:Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
48d2ifaa1
not modelled 8.0 50 Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
49c2lomA_
not modelled 7.7 11 PDB header:membrane protein
Chain: A: PDB Molecule:hig1 domain family member 1a;
PDBTitle: backbone structure of human membrane protein higd1a
50d1pj3a1
not modelled 7.7 55 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Aminoacid dehydrogenase-like, C-terminal domain
51c2kpeA_
not modelled 7.4 30 PDB header:membrane protein
Chain: A: PDB Molecule:glycophorin-a;
PDBTitle: refined structure of glycophorin a transmembrane segment dimer in dpc2 micelles
52c2kpeB_
not modelled 7.4 30 PDB header:membrane protein
Chain: B: PDB Molecule:glycophorin-a;
PDBTitle: refined structure of glycophorin a transmembrane segment dimer in dpc2 micelles
53d1zcha1
not modelled 7.2 30 Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
54c2zt9F_
not modelled 7.2 21 PDB header:photosynthesis
Chain: F: PDB Molecule:cytochrome b6-f complex subunit 7;
PDBTitle: crystal structure of the cytochrome b6f complex from nostoc sp. pcc2 7120
55d1o0sa1
not modelled 7.1 55 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Aminoacid dehydrogenase-like, C-terminal domain
56c3kwkA_
not modelled 7.0 20 PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nadh dehydrogenase/nad(p)h nitroreductase;
PDBTitle: crystal structure of putative nadh dehydrogenase/nad(p)h2 nitroreductase (np_809094.1) from bacteroides thetaiotaomicron vpi-3 5482 at 1.54 a resolution
57c1kqfB_
not modelled 6.9 8 PDB header:oxidoreductase
Chain: B: PDB Molecule:formate dehydrogenase, nitrate-inducible, iron-sulfur
PDBTitle: formate dehydrogenase n from e. coli
58d2igda_
not modelled 6.8 4 Fold:beta-Grasp (ubiquitin-like)
Superfamily:Immunoglobulin-binding domains
Family:Immunoglobulin-binding domains
59d1f1sa3
not modelled 6.8 36 Fold:Hyaluronate lyase-like, C-terminal domain
Superfamily:Hyaluronate lyase-like, C-terminal domain
Family:Hyaluronate lyase-like, C-terminal domain
60d1tula_
not modelled 6.7 38 Fold:beta-clip
Superfamily:Tlp20, baculovirus telokin-like protein
Family:Tlp20, baculovirus telokin-like protein
61d1n7oa2
not modelled 6.7 45 Fold:Hyaluronate lyase-like, C-terminal domain
Superfamily:Hyaluronate lyase-like, C-terminal domain
Family:Hyaluronate lyase-like, C-terminal domain
62d1vl6a1
not modelled 6.7 36 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Aminoacid dehydrogenase-like, C-terminal domain
63c2w2hB_
not modelled 6.3 26 PDB header:rna-binding protein
Chain: B: PDB Molecule:cyclin-t1;
PDBTitle: structural basis of transcription activation by the cyclin2 t1-tat-tar rna complex from eiav
64c3e39A_
not modelled 6.2 30 PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nitroreductase;
PDBTitle: crystal structure of a putative nitroreductase in complex with fmn2 (dde_0787) from desulfovibrio desulfuricans subsp. at 1.70 a3 resolution
65d1rz4a1
not modelled 6.2 31 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Eukaryotic translation initiation factor 3 subunit 12, eIF3k, C-terminal domain
66c1ww8A_
not modelled 6.1 55 PDB header:oxidoreductase
Chain: A: PDB Molecule:malate oxidoreductase;
PDBTitle: crystal structure of malic enzyme from pyrococcus2 horikoshii ot3
67d1gq2a1
not modelled 6.1 55 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Aminoacid dehydrogenase-like, C-terminal domain
68c2e1mA_
not modelled 6.0 19 PDB header:oxidoreductase
Chain: A: PDB Molecule:l-glutamate oxidase;
PDBTitle: crystal structure of l-glutamate oxidase from streptomyces sp. x-119-6
69c1tt9B_
not modelled 5.8 32 PDB header:transferase, lyase
Chain: B: PDB Molecule:formimidoyltransferase-cyclodeaminase
PDBTitle: structure of the bifunctional and golgi associated2 formiminotransferase cyclodeaminase octamer
70c2pjvA_
not modelled 5.8 39 PDB header:viral protein
Chain: A: PDB Molecule:envelope glycoprotein;
PDBTitle: solution structure of hiv-1 gp41 fusion domain bound to dpc2 micelle
71d2e74g1
not modelled 5.7 26 Fold:Single transmembrane helix
Superfamily:PetG subunit of the cytochrome b6f complex
Family:PetG subunit of the cytochrome b6f complex
72d1ps9a3
not modelled 5.7 31 Fold:Nucleotide-binding domain
Superfamily:Nucleotide-binding domain
Family:N-terminal domain of adrenodoxin reductase-like
73c2hayD_
not modelled 5.6 10 PDB header:oxidoreductase
Chain: D: PDB Molecule:putative nad(p)h-flavin oxidoreductase;
PDBTitle: the crystal structure of the putative nad(p)h-flavin oxidoreductase2 from streptococcus pyogenes m1 gas
74d1vf5g_
not modelled 5.6 25 Fold:Single transmembrane helix
Superfamily:PetG subunit of the cytochrome b6f complex
Family:PetG subunit of the cytochrome b6f complex
75c1vf5G_
not modelled 5.6 25 PDB header:photosynthesis
Chain: G: PDB Molecule:protein pet g;
PDBTitle: crystal structure of cytochrome b6f complex from m.laminosus
76d1vfra_
not modelled 5.6 33 Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
77d1v54d_
not modelled 5.5 31 Fold:Single transmembrane helix
Superfamily:Mitochondrial cytochrome c oxidase subunit IV
Family:Mitochondrial cytochrome c oxidase subunit IV
78c2rpvA_
not modelled 5.5 8 PDB header:immune system
Chain: A: PDB Molecule:immunoglobulin g-binding protein g;
PDBTitle: solution structure of gb1 with lbt probe
79c1erfA_
not modelled 5.4 35 PDB header:viral protein
Chain: A: PDB Molecule:transmembrane glycoprotein;
PDBTitle: conformational mapping of the n-terminal fusion peptide of2 hiv-1 gp41 using 13c-enhanced fourier transform infrared3 spectroscopy (ftir)
80d1vkwa_
not modelled 5.3 30 Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:Putative nitroreductase TM1586
81c3ge6B_
not modelled 5.2 44 PDB header:oxidoreductase
Chain: B: PDB Molecule:nitroreductase;
PDBTitle: crystal structure of a putative nitroreductase in complex with fmn2 (exig_2970) from exiguobacterium sibiricum 255-15 at 1.85 a3 resolution
82c4f43A_
not modelled 5.2 29 PDB header:recombination/dna
Chain: A: PDB Molecule:protelomerase;
PDBTitle: protelomerase tela mutant r255a complexed with caag hairpin dna
83c3m5kA_
not modelled 5.2 40 PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nadh dehydrogenase/nad(p)h nitroreductase;
PDBTitle: crystal structure of putative nadh dehydrogenase/nad(p)h2 nitroreductase (bdi_1728) from parabacteroides distasonis atcc 85033 at 1.86 a resolution
84d1m56d_
not modelled 5.2 25 Fold:Single transmembrane helix
Superfamily:Bacterial aa3 type cytochrome c oxidase subunit IV
Family:Bacterial aa3 type cytochrome c oxidase subunit IV
85c2lp1A_
not modelled 5.2 47 PDB header:membrane protein
Chain: A: PDB Molecule:c99;
PDBTitle: the solution nmr structure of the transmembrane c-terminal domain of2 the amyloid precursor protein (c99)
86c1sazA_
not modelled 5.1 33 PDB header:transferase
Chain: A: PDB Molecule:probable butyrate kinase 2;
PDBTitle: membership in the askha superfamily: enzymological2 properties and crystal structure of butyrate kinase 2 from3 thermotoga maritima
87d1fd6a_
not modelled 5.0 9 Fold:beta-Grasp (ubiquitin-like)
Superfamily:Immunoglobulin-binding domains
Family:Immunoglobulin-binding domains
88c1gz3B_
not modelled 5.0 55 PDB header:oxidoreductase
Chain: B: PDB Molecule:nad-dependent malic enzyme;
PDBTitle: molecular mechanism for the regulation of human mitochondrial2 nad(p)+-dependent malic enzyme by atp and fumarate

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