PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1vfra_

Fold library id	Fold	Superfamily	Family
d1vfra_	FMN-dependent nitroreductase-like	FMN-dependent nitroreductase-like	NADH oxidase/flavin reductase

Links to external resources
Added to library: Tue Mar 16 12:15:12 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T H P I I H D L E N R Y T S K K Y D P S K K V S Q E D L A V L L E A L R L S A S S I N S Q P W K F I V I E S D A A K Q R M H D S F A N M H Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S S B
T T
T
G G G
S T T S S S
G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F N Q P H I K A C S H V I L F A N K L S Y T R D D Y D V V L S K A V A D K R I T E E Q K E A A F A S F K F V E L N C D E N G E H K A W T K P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G T S S S
T T S S
G G G G T
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q A Y L A L G N A L H T L A R L N I D S T T M E G I D P E L L S E I F A D E L K G Y E C H V A L A I G Y H H P S E D Y N A S L P K S R K A F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T T T T T T T
B
T T T
G G G G S

. . . . . . .

Sequence E D V I T I L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	H	P	I	I	H	D	L	E	N	R	Y	T	S	K	K	Y	D	P	S	K	K	V	S	Q	E	D	L	A	V	L	L	E	A	L	R	L	S	A	S	S	I	N	S	Q	P	W	K	F	I	V	I	E	S	D	A	A	K	Q	R	M	H	D	S	F	A	N	M	H	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													B		S	S	B		T	T																	T				G	G	G											S										T	T	S	S	S		G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	N	Q	P	H	I	K	A	C	S	H	V	I	L	F	A	N	K	L	S	Y	T	R	D	D	Y	D	V	V	L	S	K	A	V	A	D	K	R	I	T	E	E	Q	K	E	A	A	F	A	S	F	K	F	V	E	L	N	C	D	E	N	G	E	H	K	A	W	T	K	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	T						S	S									S																	T	T	S	S									G	G	G	G						T			T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	A	Y	L	A	L	G	N	A	L	H	T	L	A	R	L	N	I	D	S	T	T	M	E	G	I	D	P	E	L	L	S	E	I	F	A	D	E	L	K	G	Y	E	C	H	V	A	L	A	I	G	Y	H	H	P	S	E	D	Y	N	A	S	L	P	K	S	R	K	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T									S									T	T	T	T	T	T	T												B		T	T	T		G	G	G	G	S
	.	.	.	.	.	.	.
Sequence	E	D	V	I	T	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)