1 c2jvlA_
99.9
52
PDB header: transcriptionChain: A: PDB Molecule: trmbf1;PDBTitle: nmr structure of the c-terminal domain of mbf1 of trichoderma reesei
2 d1x57a1
99.8
57
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: EDF1-like3 c1y9qA_
99.6
14
PDB header: transcription regulatorChain: A: PDB Molecule: transcriptional regulator, hth_3 family;PDBTitle: crystal structure of hth_3 family transcriptional regulator2 from vibrio cholerae
4 c3ivpD_
99.6
21
PDB header: dna binding proteinChain: D: PDB Molecule: putative transposon-related dna-binding protein;PDBTitle: the structure of a possible transposon-related dna-binding protein2 from clostridium difficile 630.
5 c2bnoA_
99.6
18
PDB header: oxidoreductaseChain: A: PDB Molecule: epoxidase;PDBTitle: the structure of hydroxypropylphosphonic acid epoxidase2 from s. wedmorenis.
6 c3op9A_
99.6
13
PDB header: transcription regulatorChain: A: PDB Molecule: pli0006 protein;PDBTitle: crystal structure of transcriptional regulator from listeria innocua
7 d1y9qa1
99.6
14
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Probable transcriptional regulator VC1968, N-terminal domain8 c3vk0B_
99.5
22
PDB header: dna binding proteinChain: B: PDB Molecule: transcriptional regulator;PDBTitle: crystal structure of hypothetical transcription factor nhtf from2 neisseria
9 c2ewtA_
99.5
24
PDB header: dna binding proteinChain: A: PDB Molecule: putative dna-binding protein;PDBTitle: crystal structure of the dna-binding domain of bldd
10 d1rioa_
99.5
15
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Phage repressors11 c3dnvB_
99.5
17
PDB header: transcription/dnaChain: B: PDB Molecule: hth-type transcriptional regulator hipb;PDBTitle: mdt protein
12 c3mlfC_
99.5
22
PDB header: transcription regulatorChain: C: PDB Molecule: transcriptional regulator;PDBTitle: putative transcriptional regulator from staphylococcus aureus.
13 c3lisB_
99.5
19
PDB header: transcriptionChain: B: PDB Molecule: csp231i c protein;PDBTitle: crystal structure of the restriction-modification controller protein2 c.csp231i (monoclinic form)
14 c2kpjA_
99.5
14
PDB header: transcription regulatorChain: A: PDB Molecule: sos-response transcriptional repressor, lexa;PDBTitle: solution structure of protein sos-response transcriptional2 repressor, lexa from eubacterium rectale. northeast3 structural genomics consortium target err9a
15 c1b0nA_
99.5
22
PDB header: transcription regulatorChain: A: PDB Molecule: protein (sinr protein);PDBTitle: sinr protein/sini protein complex
16 d1y7ya1
99.5
25
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: SinR domain-like17 d2o38a1
99.5
14
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: NE135418 c2o38A_
99.5
14
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: hypothetical protein;PDBTitle: putative xre family transcriptional regulator
19 c3kxaD_
99.5
22
PDB header: structural genomics, unknown functionChain: D: PDB Molecule: putative uncharacterized protein;PDBTitle: crystal structure of ngo0477 from neisseria gonorrhoeae
20 d2r1jl1
99.5
22
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Phage repressors21 c3omtA_
not modelled
99.5
15
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: uncharacterized protein;PDBTitle: putative antitoxin component, chu_2935 protein, from xre family from2 prevotella buccae.
22 c3clcC_
not modelled
99.5
26
PDB header: transcription regulator/dnaChain: C: PDB Molecule: regulatory protein;PDBTitle: crystal structure of the restriction-modification controller protein2 c.esp1396i tetramer in complex with its natural 35 base-pair operator
23 c3f52A_
not modelled
99.5
24
PDB header: transcription activatorChain: A: PDB Molecule: clp gene regulator (clgr);PDBTitle: crystal structure of the clp gene regulator clgr from c. glutamicum
24 d2b5aa1
not modelled
99.5
23
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: SinR domain-like25 c3bs3A_
not modelled
99.5
18
PDB header: dna binding proteinChain: A: PDB Molecule: putative dna-binding protein;PDBTitle: crystal structure of a putative dna-binding protein from bacteroides2 fragilis
26 d1adra_
not modelled
99.5
22
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Phage repressors27 c3f6wE_
not modelled
99.5
18
PDB header: dna binding proteinChain: E: PDB Molecule: xre-family like protein;PDBTitle: xre-family like protein from pseudomonas syringae pv. tomato str.2 dc3000
28 c3eusB_
not modelled
99.5
20
PDB header: dna binding proteinChain: B: PDB Molecule: dna-binding protein;PDBTitle: the crystal structure of the dna binding protein from silicibacter2 pomeroyi
29 d1llib_
not modelled
99.5
15
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Phage repressors30 d1lmb3_
not modelled
99.4
15
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Phage repressors31 d2icta1
not modelled
99.4
15
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: SinR domain-like32 c2ebyA_
not modelled
99.4
8
PDB header: transcriptionChain: A: PDB Molecule: putative hth-type transcriptional regulator ybaq;PDBTitle: crystal structure of a hypothetical protein from e. coli
33 d1sq8a_
not modelled
99.4
27
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Phage repressors34 d2croa_
not modelled
99.4
24
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Phage repressors35 d2ofya1
not modelled
99.4
18
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: SinR domain-like36 d2a6ca1
not modelled
99.4
12
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: NE135437 d1r69a_
not modelled
99.4
21
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Phage repressors38 c3cecA_
not modelled
99.4
14
PDB header: transcriptionChain: A: PDB Molecule: putative antidote protein of plasmid maintenance system;PDBTitle: crystal structure of a putative antidote protein of plasmid2 maintenance system (npun_f2943) from nostoc punctiforme pcc 73102 at3 1.60 a resolution
39 d1b0na2
not modelled
99.4
23
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: SinR domain-like40 c2ef8A_
not modelled
99.4
16
PDB header: transcription regulatorChain: A: PDB Molecule: putative transcription factor;PDBTitle: crystal structure of c.ecot38is
41 d1utxa_
not modelled
99.4
25
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: SinR domain-like42 c3b7hA_
not modelled
99.4
18
PDB header: structural proteinChain: A: PDB Molecule: prophage lp1 protein 11;PDBTitle: crystal structure of the prophage lp1 protein 11
43 c2xcjB_
not modelled
99.4
16
PDB header: viral proteinChain: B: PDB Molecule: c protein;PDBTitle: crystal structure of p2 c, the immunity repressor of2 temperate e. coli phage p2
44 c3trbA_
not modelled
99.3
13
PDB header: dna binding proteinChain: A: PDB Molecule: virulence-associated protein i;PDBTitle: structure of an addiction module antidote protein of a higa (higa)2 family from coxiella burnetii
45 c3bdnB_
not modelled
99.3
14
PDB header: transcription/dnaChain: B: PDB Molecule: lambda repressor;PDBTitle: crystal structure of the lambda repressor
46 c3pxpA_
not modelled
99.3
20
PDB header: transcription regulatorChain: A: PDB Molecule: helix-turn-helix domain protein;PDBTitle: crystal structure of a pas and dna binding domain containing protein2 (caur_2278) from chloroflexus aurantiacus j-10-fl at 2.30 a3 resolution
47 c3t76A_
not modelled
99.2
10
PDB header: transcription regulatorChain: A: PDB Molecule: transcriptional regulator vanug;PDBTitle: crystal structure of transcriptional regulator vanug, form ii
48 c2qfcB_
not modelled
99.2
20
PDB header: transcription regulationChain: B: PDB Molecule: plcr protein;PDBTitle: crystal structure of bacillus thuringiensis plcr complexed with papr
49 c3fymA_
not modelled
99.2
14
PDB header: dna binding proteinChain: A: PDB Molecule: putative uncharacterized protein;PDBTitle: the 1a structure of ymfm, a putative dna-binding membrane2 protein from staphylococcus aureus
50 c2axzC_
not modelled
99.2
26
PDB header: transcriptionChain: C: PDB Molecule: prgx;PDBTitle: crystal structure of prgx/ccf10 complex
51 c2wusR_
not modelled
99.2
13
PDB header: structural proteinChain: R: PDB Molecule: putative uncharacterized protein;PDBTitle: bacterial actin mreb assembles in complex with cell shape2 protein rodz
52 c2ppxA_
not modelled
99.1
22
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: uncharacterized protein atu1735;PDBTitle: crystal structure of a hth xre-family like protein from agrobacterium2 tumefaciens
53 d2ppxa1
not modelled
99.1
22
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: SinR domain-like54 c2fjrB_
not modelled
99.0
13
PDB header: transcription regulatorChain: B: PDB Molecule: repressor protein ci;PDBTitle: crystal structure of bacteriophage 186
55 c3fmyA_
not modelled
99.0
15
PDB header: dna binding proteinChain: A: PDB Molecule: hth-type transcriptional regulator mqsaPDBTitle: structure of the c-terminal domain of the e. coli protein2 mqsa (ygit/b3021)
56 c3gn5B_
not modelled
98.7
18
PDB header: dna binding proteinChain: B: PDB Molecule: hth-type transcriptional regulator mqsa (ygit/b3021);PDBTitle: structure of the e. coli protein mqsa (ygit/b3021)
57 d2bnma1
not modelled
97.5
21
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: SinR domain-like58 c3r1fO_
not modelled
97.5
10
PDB header: transcriptionChain: O: PDB Molecule: esx-1 secretion-associated regulator espr;PDBTitle: crystal structure of a key regulator of virulence in mycobacterium2 tuberculosis
59 d1dwka1
not modelled
97.2
13
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Cyanase N-terminal domain60 c2iv1J_
not modelled
96.9
13
PDB header: lyaseChain: J: PDB Molecule: cyanate hydratase;PDBTitle: site directed mutagenesis of key residues involved in the2 catalytic mechanism of cyanase
61 c3bd1B_
not modelled
96.7
24
PDB header: transcriptionChain: B: PDB Molecule: cro protein;PDBTitle: structure of the cro protein from putative prophage element xfaso 1 in2 xylella fastidiosa strain ann-1
62 d1lcda_
not modelled
96.7
17
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: GalR/LacI-like bacterial regulator63 d2hsga1
not modelled
96.6
10
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: GalR/LacI-like bacterial regulator64 d2bjca1
not modelled
96.5
17
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: GalR/LacI-like bacterial regulator65 d1efaa1
not modelled
96.3
17
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: GalR/LacI-like bacterial regulator66 d1e3oc2
not modelled
96.1
19
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: POU-specific domain67 d1nera_
not modelled
96.0
18
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Phage repressors68 c3kjxD_
not modelled
96.0
10
PDB header: transcription regulatorChain: D: PDB Molecule: transcriptional regulator, laci family;PDBTitle: crystal structure of a transcriptional regulator, lacl2 family protein from silicibacter pomeroyi
69 d1au7a2
not modelled
95.9
11
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: POU-specific domain70 d1qpza1
not modelled
95.9
18
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: GalR/LacI-like bacterial regulator71 c2auwB_
not modelled
95.7
20
PDB header: unknown functionChain: B: PDB Molecule: hypothetical protein ne0471;PDBTitle: crystal structure of putative dna binding protein ne0471 from2 nitrosomonas europaea atcc 19718
72 c2l8nA_
not modelled
95.7
21
PDB header: transcription regulatorChain: A: PDB Molecule: transcriptional repressor cytr;PDBTitle: nmr structure of the cytidine repressor dna binding domain in presence2 of operator half-site dna
73 d1uxca_
not modelled
95.6
13
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: GalR/LacI-like bacterial regulator74 c2lcvA_
not modelled
95.6
22
PDB header: transcription regulatorChain: A: PDB Molecule: hth-type transcriptional repressor cytr;PDBTitle: structure of the cytidine repressor dna-binding domain; an alternate2 calculation
75 c3h5tA_
not modelled
95.5
10
PDB header: transcription regulatorChain: A: PDB Molecule: transcriptional regulator, laci family;PDBTitle: crystal structure of a transcriptional regulator, lacl2 family protein from corynebacterium glutamicum
76 c3l1pA_
not modelled
95.3
14
PDB header: transcription/dnaChain: A: PDB Molecule: pou domain, class 5, transcription factor 1;PDBTitle: pou protein:dna complex
77 c1zvvA_
not modelled
95.2
10
PDB header: transcription/dnaChain: A: PDB Molecule: glucose-resistance amylase regulator;PDBTitle: crystal structure of a ccpa-crh-dna complex
78 c3d1nK_
not modelled
95.1
8
PDB header: transcription regulator/dnaChain: K: PDB Molecule: pou domain, class 6, transcription factor 1;PDBTitle: structure of human brn-5 transcription factor in complex2 with corticotrophin-releasing hormone gene promoter
79 c1bdhA_
not modelled
95.0
19
PDB header: transcription/dnaChain: A: PDB Molecule: protein (purine repressor);PDBTitle: purine repressor mutant-hypoxanthine-palindromic operator2 complex
80 c3k2zA_
not modelled
94.9
16
PDB header: hydrolaseChain: A: PDB Molecule: lexa repressor;PDBTitle: crystal structure of a lexa protein from thermotoga maritima
81 d2csfa1
not modelled
94.9
17
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: CUT domain82 c1au7B_
not modelled
94.8
23
PDB header: transcription/dnaChain: B: PDB Molecule: protein pit-1;PDBTitle: pit-1 mutant/dna complex
83 d1uxda_
not modelled
94.8
13
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: GalR/LacI-like bacterial regulator84 d1ic8a2
not modelled
94.8
8
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: POU-specific domain85 c1zx4B_
not modelled
94.7
28
PDB header: translationChain: B: PDB Molecule: plasmid partition par b protein;PDBTitle: structure of parb bound to dna
86 d2awia1
not modelled
94.7
28
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: PrgX N-terminal domain-like87 c1ic8B_
not modelled
94.7
7
PDB header: transcription/dnaChain: B: PDB Molecule: hepatocyte nuclear factor 1-alpha;PDBTitle: hepatocyte nuclear factor 1a bound to dna : mody3 gene2 product
88 c2k9qB_
not modelled
94.6
15
PDB header: structural genomics, unknown functionChain: B: PDB Molecule: uncharacterized protein;PDBTitle: solution nmr structure of hth_xre family transcriptional2 regulator bt_p548217 from bacteroides thetaiotaomicron.3 northeast structural genomics consortium target btr244.
89 d1r71a_
not modelled
94.2
20
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: KorB DNA-binding domain-likeFamily: KorB DNA-binding domain-like90 c1r71B_
not modelled
93.8
20
PDB header: transcription/dnaChain: B: PDB Molecule: transcriptional repressor protein korb;PDBTitle: crystal structure of the dna binding domain of korb in2 complex with the operator dna
91 c2h8rA_
not modelled
93.5
8
PDB header: transcription activator/dnaChain: A: PDB Molecule: hepatocyte nuclear factor 1-beta;PDBTitle: hepatocyte nuclear factor 1b bound to dna: mody5 gene2 product
92 c2xsdC_
not modelled
93.2
16
PDB header: transcription/dnaChain: C: PDB Molecule: pou domain, class 3, transcription factor 1;PDBTitle: crystal structure of the dimeric oct-6 (pou3f1) pou domain2 bound to palindromic more dna
93 c1hf0A_
not modelled
92.7
20
PDB header: transcription factorChain: A: PDB Molecule: octamer-binding transcription factor 1;PDBTitle: crystal structure of the dna-binding domain of oct-1 bound2 to dna as a dimer
94 d1vz0a1
not modelled
92.7
11
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: KorB DNA-binding domain-likeFamily: KorB DNA-binding domain-like95 d2o4aa1
not modelled
92.5
11
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: CUT domain96 d1s7ea2
not modelled
91.6
11
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: CUT domain97 c2w48D_
not modelled
91.6
17
PDB header: transcriptionChain: D: PDB Molecule: sorbitol operon regulator;PDBTitle: crystal structure of the full-length sorbitol operon2 regulator sorc from klebsiella pneumoniae
98 d1k78a1
not modelled
91.1
14
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: Homeodomain-likeFamily: Paired domain99 d1z05a1
not modelled
91.1
19
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: "Winged helix" DNA-binding domainFamily: ROK associated domain100 d1wiza_
not modelled
90.1
14
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: CUT domain101 d6paxa1
not modelled
89.7
10
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: Homeodomain-likeFamily: Paired domain102 d2auwa1
not modelled
89.6
20
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: NE0471 C-terminal domain-like103 c1yseA_
not modelled
89.2
11
PDB header: dna binding proteinChain: A: PDB Molecule: dna-binding protein satb1;PDBTitle: solution structure of the mar-binding domain of satb1
104 d1x2la1
not modelled
88.9
8
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: CUT domain105 c1u78A_
not modelled
88.8
12
PDB header: dna binding protein/dnaChain: A: PDB Molecule: transposable element tc3 transposase;PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna
106 c1s7eA_
not modelled
88.7
14
PDB header: transcriptionChain: A: PDB Molecule: hepatocyte nuclear factor 6;PDBTitle: solution structure of hnf-6
107 d1s4ka_
not modelled
88.7
11
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: YdiL-like108 d1hlva1
not modelled
88.6
14
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: Homeodomain-likeFamily: Centromere-binding109 d2jn6a1
not modelled
88.6
10
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: Homeodomain-likeFamily: Cgl2762-like110 d1z6ra1
not modelled
88.4
17
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: "Winged helix" DNA-binding domainFamily: ROK associated domain111 c3mkyP_
not modelled
88.1
18
PDB header: dna binding protein/dnaChain: P: PDB Molecule: protein sopb;PDBTitle: structure of sopb(155-323)-18mer dna complex, i23 form
112 c3ctaA_
not modelled
87.9
14
PDB header: transferaseChain: A: PDB Molecule: riboflavin kinase;PDBTitle: crystal structure of riboflavin kinase from thermoplasma2 acidophilum
113 d3ctaa1
not modelled
87.8
15
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: "Winged helix" DNA-binding domainFamily: MarR-like transcriptional regulators114 c6paxA_
not modelled
87.6
11
PDB header: gene regulation/dnaChain: A: PDB Molecule: homeobox protein pax-6;PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions
115 d1wh8a_
not modelled
87.1
16
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: CUT domain116 d1rzsa_
not modelled
87.1
15
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Phage repressors117 c3mkzU_
not modelled
87.0
18
PDB header: dna-binding protein/dnaChain: U: PDB Molecule: protein sopb;PDBTitle: structure of sopb(155-272)-18mer complex, p21 form
118 d1pdnc_
not modelled
86.4
11
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: Homeodomain-likeFamily: Paired domain119 c1z05A_
not modelled
86.4
21
PDB header: transcriptionChain: A: PDB Molecule: transcriptional regulator, rok family;PDBTitle: crystal structure of the rok family transcriptional regulator, homolog2 of e.coli mlc protein.
120 c1z6rC_
not modelled
86.3
17
PDB header: transcriptionChain: C: PDB Molecule: mlc protein;PDBTitle: crystal structure of mlc from escherichia coli
