PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3h5tA_

Fold library id	PDB Header	Molecule	Title
c3h5tA_	PDB header: transcription regulator	Chain: A: PDB Molecule: transcriptional regulator, laci family;	PDBTitle: crystal structure of a transcriptional regulator, lacl2 family protein from corynebacterium glutamicum

Links to external resources
Added to library: Sun Aug 29 00:48:09 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q Q Y G T L A S I A A K L G I S R T T V S N A Y N R P E Q L S A E L R Q R I L D T A E D M G Y A G A I G V L L T E D L T Y A F E D M A S V D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S
G G G S
T T
S S
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F L A G V A Q A A G D T Q L T L I P A S P A S S V D H V S A Q Q L V N N A A V D G V V I Y S V A K G D P H I D A I R A R G L P A V I A D Q P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
T T
T
S
S
T T
T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A R E E G M P F I A P N N R K A I A P A A Q A L I D A G H R K I G I L S I R L D R A N N D G E V T R E R L E N A Q Y Q V Q R D R V R G A M E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
T T T
S
S S S
T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence V F I E A G I D P G T V P I M E C W I N N R Q H N F E V A K E L L E T H P D L T A V L C T V D A L A F G V L E Y L K S V G K S A P A D L S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
G G G S
S S
T T
S S T T
T T T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . .

Sequence T G F D G T H M A L A R D L T T V I Q P N K L K G F K A G E T L L K M I D K E Y V E P E V E L E T S F H P G S T V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
S
S

Download: PDB structure FASTA sequence
Hidden Markov model

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	Q	Y	G	T	L	A	S	I	A	A	K	L	G	I	S	R	T	T	V	S	N	A	Y	N	R	P	E	Q	L	S	A	E	L	R	Q	R	I	L	D	T	A	E	D	M	G	Y	A	G	A	I	G	V	L	L	T	E	D	L	T	Y	A	F	E	D	M	A	S	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T										T	S												G	G	G	S															T	T										S	S		T	T					S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	L	A	G	V	A	Q	A	A	G	D	T	Q	L	T	L	I	P	A	S	P	A	S	S	V	D	H	V	S	A	Q	Q	L	V	N	N	A	A	V	D	G	V	V	I	Y	S	V	A	K	G	D	P	H	I	D	A	I	R	A	R	G	L	P	A	V	I	A	D	Q	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S												T	T												T				S						S			T	T											T							S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	R	E	E	G	M	P	F	I	A	P	N	N	R	K	A	I	A	P	A	A	Q	A	L	I	D	A	G	H	R	K	I	G	I	L	S	I	R	L	D	R	A	N	N	D	G	E	V	T	R	E	R	L	E	N	A	Q	Y	Q	V	Q	R	D	R	V	R	G	A	M	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		T	T												T										T	T			S									S	S	S													T				T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	F	I	E	A	G	I	D	P	G	T	V	P	I	M	E	C	W	I	N	N	R	Q	H	N	F	E	V	A	K	E	L	L	E	T	H	P	D	L	T	A	V	L	C	T	V	D	A	L	A	F	G	V	L	E	Y	L	K	S	V	G	K	S	A	P	A	D	L	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T			G	G	G	S						S	S																		T	T							S	S														T	T			T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Sequence	T	G	F	D	G	T	H	M	A	L	A	R	D	L	T	T	V	I	Q	P	N	K	L	K	G	F	K	A	G	E	T	L	L	K	M	I	D	K	E	Y	V	E	P	E	V	E	L	E	T	S	F	H	P	G	S	T	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T																								T	T					S												S