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Job DescriptionP0AC86
Confidence96.97%DateThu Jan 5 11:17:35 GMT 2012
Rank20Aligned Residues175
% Identity18%Templatec3okaA_
PDB info PDB header:transferaseChain: A: PDB Molecule:gdp-mannose-dependent alpha-(1-6)-phosphatidylinositol PDBTitle: crystal structure of corynebacterium glutamicum pimb' in complex with2 gdp-man (triclinic crystal form)
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   539540.........550.........560.........570.........580.........590.........600.........610........
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Query Sequence  VNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFGGKAASAYYMAKHIIHLINDVAKVINNDPQI
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Template Sequence  FTDTTPVIACNSRLVPRKGQDS. LIKAMPQVIAARP. . . . . . . DAQLLIVGSGRYESTLRRLATD. . . . . . . . . . . . . . .
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TT

S
SSGGG
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T.......T



TTTGG...............
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   194.....200.........210..... ....220........ .230.........240.........250
 
   619620.........630.........640.........650.. .......660.........670.........680.........690...
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Query Sequence  GDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAG. . . . . TEASGTSNMKFALNGALTIGTLDGANVEMLDHVGADNIFIF
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Template Sequence  . VSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTP. . . ATGLVV
Template Known Secondary structure  .GGGGS


S



BGGGTB


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TT

SSTTGGGG

T...TT
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   251........260.........270.........280.........290.........300.........310.........320 ......
 
   694.....700.........710.........720.........730.........740.........750.........760.........770...
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Query Sequence  GNTAEEVEELRRQGYKPREYYEKDEELHQVLTQIGSGVFSPEDPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDEL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EGSDVDKLSELLIE. . . . . . . . . . . . . . . . . . . . . . . L
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TT
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   327..330.........340 .
 
   774.....780.........790.. .......800.....
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Query Sequence  YELQEEWTAKAMLNIANMG. YFSSDRTIKEYAD
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Template Sequence  LDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTN
Template Known Secondary structure  T
TB
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   342.......350.........360.........370....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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