20 c3okaA_ Probab=96.97   E-value=0.025  Score=35.60  Aligned_columns=175  Identities=18%

Q ss_pred             CCCCCEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf             87542211010022000113457840199999987085777797389982368888788899999999999762237112
Q batch____       539 VNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFGGKAASAYYMAKHIIHLINDVAKVINNDPQI  618 (815)
Q Consensus       539 l~p~~Lfd~qarRf~~YKRq~Lnil~~~~r~~~l~~np~~~~~P~q~IFaGKAhP~d~~aK~iIk~I~~va~~in~Dp~v  618 (815)
                      +.++....+++.|+...|...+ ++.....+.+...       ...+++.|.........+..-+               
T Consensus       191 ~~~~~~~~~~~g~~~~~k~~~~-~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~---------------  247 (378)
T c3okaA_         191 FTDTTPVIACNSRLVPRKGQDS-LIKAMPQVIAARP-------DAQLLIVGSGRYESTLRRLATD---------------  247 (378)
T ss_dssp             CCTTCCEEEEESCSSGGGCHHH-HHHHHHHHHHHCT-------TCEEEEECCCTTHHHHHHHTGG---------------
T ss_pred             CCCCCEEEEEEECCCCCCCHHH-HHHHHHHHHHCCC-------CCEEEEECCCCCHHHHHHHHHH---------------
T ss_conf             8778628985301675421123-4688988764068-------8405753387526789999840---------------


Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCC-----CCCCCCCCHHHHHCCCCEECCCCCHHHHHHHHCCCCCEEEC
Q ss_conf             0431389846888899978652423431488988-----55677413767876950001367705777641474653641
Q batch____       619 GDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAG-----TEASGTSNMKFALNGALTIGTLDGANVEMLDHVGADNIFIF  693 (815)
Q Consensus       619 ~~~lKVVFlenY~v~lA~~li~g~Dvwln~p~~~-----~EASGTSgMKa~lNG~l~lstlDGwnvEi~~~vg~eN~f~F  693 (815)
                       ...++.++..............+|+....+...     .|..|.+-+-||..|.+.++|--|...|+.+.   +|++++
T Consensus       248 -~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~eg~~~~~lEAma~G~PvI~s~~gg~~e~i~~---~~g~l~  323 (378)
T c3okaA_         248 -VSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTP---ATGLVV  323 (378)
T ss_dssp             -GGGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCCSCHHHHHHHHTTCCEEEESSTTGGGGCCT---TTEEEE
T ss_pred             -CCCCEEECCCCCCCCHHHHHHHCCEEEECCCCCCCCCCCCCCEEHHHHCCCCCCEEEECCCCCHHHHHCC---CCEEEE
T ss_conf             -2133257144001101333540212660121135765666521011110258823896188726875128---963997


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHH
Q ss_conf             68525666666348771113456515899987520266666797779999999860385055216747889888777776
Q batch____       694 GNTAEEVEELRRQGYKPREYYEKDEELHQVLTQIGSGVFSPEDPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDEL  773 (815)
Q Consensus       694 G~~~~ev~~~~~~gY~~~~~~~~~~~l~~v~d~i~~g~~~~~d~~~f~~Ly~~L~~~~d~~~~~~Df~~Y~~~q~~v~~~  773 (815)
                                                                ++.+.++|.+.|..                       +
T Consensus       324 ------------------------------------------~~~d~~~la~~i~~-----------------------l  338 (378)
T c3okaA_         324 ------------------------------------------EGSDVDKLSELLIE-----------------------L  338 (378)
T ss_dssp             ------------------------------------------CTTCHHHHHHHHHH-----------------------H
T ss_pred             ------------------------------------------CCCCHHHHHHHHHH-----------------------H
T ss_conf             ------------------------------------------59998999999999-----------------------9


Q ss_pred             HCCHHHHHHHHHHHHHCCC-CCCCHHHHHHHHH
Q ss_conf             3198999999999961489-8381001899999
Q batch____       774 YELQEEWTAKAMLNIANMG-YFSSDRTIKEYAD  805 (815)
Q Consensus       774 Y~d~~~W~~~~~~nIa~~g-~FsSdRmi~eYa~  805 (815)
                      ..||+.+.+|...+-..+- +||-++++++|.+
T Consensus       339 l~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~  371 (378)
T c3okaA_         339 LDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTN  371 (378)
T ss_dssp             HTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHH
T ss_pred             HCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf             848899999999999999984998999999999