Job Description P24203 Confidence 98.01% Date Thu Jan 5 11:41:12 GMT 2012 Rank 42 Aligned Residues 135 % Identity 16% Template c3k53B_ PDB info PDB header:metal transport Chain: B: PDB Molecule:ferrous iron transport protein b; PDBTitle: crystal structure of nfeob from p. furiosus Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	V	T	L	L	T	G	F	L	G	A	G	K	T	T	L	L	R	H	I	L	N	E	Q	H	G	Y	K	I	A	V	I	E	N	E	F	G	E	V	S	V	D	D	Q	L	I	G	D	R	A	T	Q	I	K	T	L	T	N	G	C	I	C	C	S	R	S	N	E	L	E	D	A	L	L	D	L	L	D	N
Query Conservation
Alig confidence																											.	.	.	.	.												.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.												.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	T	V	A	L	V	G	N	P	N	V	G	K	T	T	I	F	N	A	L	T	G	L	R	.	.	.	.	.	Q	H	V	G	N	W	P	G	V	T	V	.	.	.	.	.	.	.	E	K	K	E	G	I	M	E	Y	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T	S	S										T	T		.	.	.	.	.							T	T	S	S		.	.	.	.	.	.	.										T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.												.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.	.	.								.	40	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	K	G	N	I	Q	F	D	R	L	V	I	E	C	T	G	M	A	D	P	G	P	I	I	Q	T	F	F	S	H	E	V	L	C	Q	R	Y	L	L	D	G	V	I	A	L	V	D	A	V	H	A	D	E	Q	M	N	Q	F	T	I	A	Q	S	Q	V	G	Y	A	D	R	I	L	L	T	K	T	D	V	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	K	E	F	L	V	V	D	L	P	G	I	Y	S	L	T	A	H	S	I	D	E	L	I	A	R	N	F	I	L	D	G	N	A	D	V	I	V	D	I	V	D	S	T	C	L	M	R	N	L	F	L	T	L	E	L	F	E	M	E	V	K	N	I	I	L	V	L	N	K	F	D	L	L
Template Known Secondary structure		.	.	.	.	.	.	.												S				S	S	S												T	T			S								G	G	G														T	T			S							T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	A	E	K	L	H	E	R	L	A	R	I	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	I	D	I	K	K	M	R	K	E	L	G	V	P
Template Known Secondary structure				B										T	S
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions