42 c3k53B_ Probab=98.01   E-value=3.7e-05  Score=49.30  Aligned_columns=135  Identities=16%

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCCEECCCHHHHHHHHHHHHHH
Q ss_conf             51899818989898799999984258972899972665441268898507973999779964112258789999999973
Q batch____         4 IAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVSVDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLDN   83 (318)
Q Consensus         4 ipv~iitGfLGsGKTTll~~ll~~~~~~~~aVi~ne~g~~~iD~~~l~~~~~~~~el~~Gcicc~~~~~~~~~l~~l~~~   83 (318)
                      +|...|.|..|+|||||+|.|+...     +.+.|-.|.+-       +......+..+                     
T Consensus         3 ~~~I~ivG~~n~GKSTLin~L~~~~-----~~v~~~~~tT~-------~~~~~~~~~~~---------------------   49 (265)
T c3k53B_           3 LKTVALVGNPNVGKTTIFNALTGLR-----QHVGNWPGVTV-------EKKEGIMEYRE---------------------   49 (265)
T ss_dssp             CEEEEEEECTTSSHHHHHHHHHTTC-----EEEEECTTSSC-------EEEEEEEEETT---------------------
T ss_pred             CCEEEEECCCCCCHHHHHHHHHCCC-----CEECCCCCCEE-------EEEEEEEEECC---------------------
T ss_conf             7659998697799989999983898-----32427787405-------16899999899---------------------


Q ss_pred             CCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEECCCCC
Q ss_conf             02454675489982887479899999874080011308980189996131368877533467768632788885042233
Q batch____        84 LDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVHADEQMNQFTIAQSQVGYADRILLTKTDVA  163 (318)
Q Consensus        84 ~~~~~~~~d~iiIE~sG~a~p~~i~~~~~~~~~l~~~~~l~~vv~vvDa~~~~~~~~~~~~~~~Qi~~Ad~ivink~D~~  163 (318)
                             ....++.|+|..+...-.........+......+.++.++|+................-..--.+++||+|..
T Consensus        50 -------~~~~l~DtpG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~v~nk~D~~  122 (265)
T c3k53B_          50 -------KEFLVVDLPGIYSLTAHSIDELIARNFILDGNADVIVDIVDSTCLMRNLFLTLELFEMEVKNIILVLNKFDLL  122 (265)
T ss_dssp             -------EEEEEEECCCCSCCCSSSHHHHHHHHHHHTTCCSEEEEEEEGGGHHHHHHHHHHHHHTTCCSEEEEEETCCCC
T ss_pred             -------EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCC
T ss_conf             -------8999998777333561245688999999740001240353066644169999988750799589996664468


Q ss_pred             CCHHHHHHHHHHHCC
Q ss_conf             307899999986389
Q batch____       164 GEAEKLHERLARINA  178 (318)
Q Consensus       164 ~~~~~~~~~i~~lnp  178 (318)
                      +..+.....-..-.|
T Consensus       123 ~~~~~~~~~~~~~~~  137 (265)
T c3k53B_         123 AKIDIKKMRKELGVP  137 (265)
T ss_dssp             CCBCHHHHHHHHTSC
T ss_pred             CHHHHHHHHHHCCCE
T ss_conf             975399887443986