Email l.a.kelley@imperial.ac.uk Description P05706 Date Thu Jan 5 10:58:48 GMT 2012 Unique Job ID f6e897e40f881088

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2f9ha1 100.0 30 Fold:PTSIIA/GutA-like Superfamily:PTSIIA/GutA-like Family:PTSIIA/GutA-like 2 c2xdpA_ 74.9 13 PDB header:oxidoreductase Chain: A: PDB Molecule:lysine-specific demethylase 4c; PDBTitle: crystal structure of the tudor domain of human jmjd2c 3 d1k0ha_ 37.8 16 Fold:Phage tail proteins Superfamily:Phage tail proteins Family:gpFII-like 4 d2gp4a1 37.7 18 Fold:The "swivelling" beta/beta/alpha domain Superfamily:LeuD/IlvD-like Family:IlvD/EDD C-terminal domain-like 5 c2qqsB_ 30.4 15 PDB header:oxidoreductase Chain: B: PDB Molecule:jmjc domain-containing histone demethylation PDBTitle: jmjd2a tandem tudor domains in complex with a trimethylated2 histone h4-k20 peptide 6 d1p9ka_ 27.8 20 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:YbcJ-like 7 c2jqlA_ 27.1 17 PDB header:cell cycle Chain: A: PDB Molecule:dna damage response protein kinase dun1; PDBTitle: nmr structure of the yeast dun1 fha domain in complex with2 a doubly phosphorylated (pt) peptide derived from rad533 scd1 8 c3vg8F_ 26.1 41 PDB header:unknown function Chain: F: PDB Molecule:hypothetical protein tthb210; PDBTitle: crystal structure of hypothetical protein tthb210 from thermus2 thermophilus hb8 9 c3a5zF_ 26.0 29 PDB header:ligase Chain: F: PDB Molecule:elongation factor p; PDBTitle: crystal structure of escherichia coli genx in complex with elongation2 factor p 10 d1ueba1 23.9 14 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:eIF5a N-terminal domain-like 11 c3cpfB_ 23.5 12 PDB header:cell cycle Chain: B: PDB Molecule:eukaryotic translation initiation factor 5a-1; PDBTitle: crystal structure of human eukaryotic translation initiation factor2 eif5a 12 c2fhdA_ 22.9 22 PDB header:cell cycle Chain: A: PDB Molecule:dna repair protein rhp9/crb2; PDBTitle: crystal structure of crb2 tandem tudor domains 13 d2g50a1 22.2 12 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 14 d2vv5a1 20.9 21 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Mechanosensitive channel protein MscS (YggB), middle domain 15 d1kzla2 20.8 12 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Riboflavin synthase 16 c1xtdA_ 20.5 18 PDB header:translation Chain: A: PDB Molecule:eukaryotic initiation factor 5a; PDBTitle: structural analysis of leishmania mexicana eukaryotic initiation2 factor 5a 17 d2pp6a1 20.5 25 Fold:Phage tail proteins Superfamily:Phage tail proteins Family:gpFII-like 18 d1k8ga2 20.3 13 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 19 d1i8da2 19.2 12 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Riboflavin synthase 20 c2fphX_ 19.1 11 PDB header:dna binding protein Chain: X: PDB Molecule:ylmh; PDBTitle: cell division protein ylmh from streptococcus pneumoniae 21 c3hksB_ not modelled 18.8 14 PDB header:translation, rna binding protein Chain: B: PDB Molecule:eukaryotic translation initiation factor 5a-2; PDBTitle: crystal structure of eukaryotic translation initiation2 factor eif-5a2 from arabidopsis thaliana 22 c1bkbA_ not modelled 18.3 19 PDB header:translation Chain: A: PDB Molecule:translation initiation factor 5a; PDBTitle: initiation factor 5a from archebacterium pyrobaculum2 aerophilum 23 d1liua1 not modelled 17.3 10 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 24 c3treA_ not modelled 17.2 10 PDB header:translation Chain: A: PDB Molecule:elongation factor p; PDBTitle: structure of a translation elongation factor p (efp) from coxiella2 burnetii 25 d1pkma1 not modelled 16.8 12 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 26 c2v43A_ not modelled 16.7 12 PDB header:regulator Chain: A: PDB Molecule:sigma-e factor regulatory protein rseb; PDBTitle: crystal structure of rseb: a sensor for periplasmic stress2 response in e. coli 27 d1jb7a2 not modelled 16.7 13 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 28 c3degC_ not modelled 16.5 19 PDB header:ribosome Chain: C: PDB Molecule:gtp-binding protein lepa; PDBTitle: complex of elongating escherichia coli 70s ribosome and ef4(lepa)-2 gmppnp 29 c3er0A_ not modelled 16.4 7 PDB header:translation Chain: A: PDB Molecule:eukaryotic translation initiation factor 5a-2; PDBTitle: crystal structure of the full length eif5a from2 saccharomyces cerevisiae 30 d2cqaa1 not modelled 16.1 13 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:TIP49 domain 31 c2jkdB_ not modelled 15.8 22 PDB header:gene regulation Chain: B: PDB Molecule:pre-mrna leakage protein 1; PDBTitle: structure of the yeast pml1 splicing factor and its2 integration into the res complex 32 d1a3xa1 not modelled 14.5 7 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 33 d1mzka_ not modelled 14.4 11 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 34 c2eifA_ not modelled 13.7 14 PDB header:gene regulation Chain: A: PDB Molecule:protein (eukaryotic translation initiation factor 5a); PDBTitle: eukaryotic translation initiation factor 5a from methanococcus2 jannaschii 35 c3igzB_ not modelled 13.5 28 PDB header:isomerase Chain: B: PDB Molecule:cofactor-independent phosphoglycerate mutase; PDBTitle: crystal structures of leishmania mexicana phosphoglycerate2 mutase at low cobalt concentration 36 c2kzbA_ not modelled 13.5 18 PDB header:protein transport Chain: A: PDB Molecule:autophagy-related protein 19; PDBTitle: solution structure of alpha-mannosidase binding domain of atg19 37 d1udxa3 not modelled 13.1 11 Fold:Obg GTP-binding protein C-terminal domain Superfamily:Obg GTP-binding protein C-terminal domain Family:Obg GTP-binding protein C-terminal domain 38 d1bdoa_ not modelled 12.8 21 Fold:Barrel-sandwich hybrid Superfamily:Single hybrid motif Family:Biotinyl/lipoyl-carrier proteins and domains 39 c1r21A_ not modelled 12.7 11 PDB header:cell cycle Chain: A: PDB Molecule:antigen ki-67; PDBTitle: solution structure of human ki67 fha domain 40 d2c78a1 not modelled 12.3 22 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Translation proteins Family:Elongation factors 41 c2z14A_ not modelled 12.1 12 PDB header:signaling protein Chain: A: PDB Molecule:ef-hand domain-containing family member c2; PDBTitle: crystal structure of the n-terminal duf1126 in human ef-2 hand domain containing 2 protein 42 d1e0ta1 not modelled 11.9 18 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 43 d2dy1a1 not modelled 11.8 25 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Translation proteins Family:Elongation factors 44 d2affa1 not modelled 11.4 11 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 45 c1uebB_ not modelled 11.2 14 PDB header:rna binding protein Chain: B: PDB Molecule:elongation factor p; PDBTitle: crystal structure of translation elongation factor p from2 thermus thermophilus hb8 46 c2vv5D_ not modelled 11.1 21 PDB header:membrane protein Chain: D: PDB Molecule:small-conductance mechanosensitive channel; PDBTitle: the open structure of mscs 47 d1njjb1 not modelled 11.1 22 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 48 d1awwa_ not modelled 11.1 9 Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain 49 c3gqsB_ not modelled 11.0 19 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:adenylate cyclase-like protein; PDBTitle: crystal structure of the fha domain of ct664 protein from chlamydia2 trachomatis 50 d1kzla1 not modelled 10.9 12 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Riboflavin synthase 51 c2jpeA_ not modelled 10.9 25 PDB header:transcription Chain: A: PDB Molecule:nuclear inhibitor of protein phosphatase 1; PDBTitle: fha domain of nipp1 52 d1s04a_ not modelled 10.6 24 Fold:PUA domain-like Superfamily:PUA domain-like Family:ProFAR isomerase associated domain 53 c3oyyA_ not modelled 10.5 5 PDB header:translation Chain: A: PDB Molecule:elongation factor p; PDBTitle: structure of pseudomonas aeruginosa elongation factor p 54 d2phcb1 not modelled 10.5 29 Fold:Cyclophilin-like Superfamily:Cyclophilin-like Family:PH0987 C-terminal domain-like 55 d1gl4a1 not modelled 10.3 18 Fold:GFP-like Superfamily:GFP-like Family:Domain G2 of nidogen-1 56 c2phcB_ not modelled 10.3 29 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein ph0987; PDBTitle: crystal structure of conserved uncharacterized protein ph0987 from2 pyrococcus horikoshii 57 d1f60a1 not modelled 10.3 25 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Translation proteins Family:Elongation factors 58 d1o8ba1 not modelled 10.2 29 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:D-ribose-5-phosphate isomerase (RpiA), catalytic domain 59 c1i8dB_ not modelled 10.1 19 PDB header:transferase Chain: B: PDB Molecule:riboflavin synthase; PDBTitle: crystal structure of riboflavin synthase 60 c1a3wB_ not modelled 9.7 7 PDB header:transferase Chain: B: PDB Molecule:pyruvate kinase; PDBTitle: pyruvate kinase from saccharomyces cerevisiae complexed with fbp, pg,2 mn2+ and k+ 61 d1mkfa_ not modelled 9.6 21 Fold:Viral chemokine binding protein m3 Superfamily:Viral chemokine binding protein m3 Family:Viral chemokine binding protein m3 62 c3elsA_ not modelled 9.6 22 PDB header:splicing Chain: A: PDB Molecule:pre-mrna leakage protein 1; PDBTitle: crystal structure of yeast pml1p, residues 51-204 63 c1iz6B_ not modelled 9.6 14 PDB header:biosynthetic protein Chain: B: PDB Molecule:initiation factor 5a; PDBTitle: crystal structure of translation initiation factor 5a from pyrococcus2 horikoshii 64 c3poaA_ not modelled 9.5 28 PDB header:peptide binding protein Chain: A: PDB Molecule:putative uncharacterized protein tb39.8; PDBTitle: structural and functional analysis of phosphothreonine-dependent fha2 domain interactions 65 d1yjma1 not modelled 9.0 35 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 66 d2g1la1 not modelled 8.8 17 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 67 c2kzkA_ not modelled 8.8 14 PDB header:protein transport Chain: A: PDB Molecule:uncharacterized protein yol083w; PDBTitle: solution structure of alpha-mannosidase binding domain of atg34 68 c1ybyB_ not modelled 8.6 24 PDB header:translation Chain: B: PDB Molecule:translation elongation factor p; PDBTitle: conserved hypothetical protein cth-95 from clostridium2 thermocellum 69 c3fm8A_ not modelled 8.3 29 PDB header:transport protein/hydrolase activator Chain: A: PDB Molecule:kinesin-like protein kif13b; PDBTitle: crystal structure of full length centaurin alpha-1 bound with the fha2 domain of kif13b (capri target) 70 d1pkla1 not modelled 8.3 12 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 71 d1bkba1 not modelled 8.3 19 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:eIF5a N-terminal domain-like 72 d2qqra2 not modelled 8.2 17 Fold:SH3-like barrel Superfamily:Tudor/PWWP/MBT Family:Tudor domain 73 c2zpmA_ not modelled 8.1 13 PDB header:hydrolase Chain: A: PDB Molecule:regulator of sigma e protease; PDBTitle: crystal structure analysis of pdz domain b 74 c3e20A_ not modelled 8.1 19 PDB header:translation Chain: A: PDB Molecule:eukaryotic peptide chain release factor gtp-binding PDBTitle: crystal structure of s.pombe erf1/erf3 complex 75 d2g82a1 not modelled 7.8 12 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 76 c1h4uA_ not modelled 7.7 20 PDB header:extracellular matrix protein Chain: A: PDB Molecule:nidogen-1; PDBTitle: domain g2 of mouse nidogen-1 77 d1gtta1 not modelled 7.5 12 Fold:FAH Superfamily:FAH Family:FAH 78 d2zjrm1 not modelled 7.4 19 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:Ribosomal protein L19 79 d3etja1 not modelled 7.4 44 Fold:Barrel-sandwich hybrid Superfamily:Rudiment single hybrid motif Family:BC C-terminal domain-like 80 d2p13a1 not modelled 7.4 16 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 81 d1o8bb1 not modelled 7.3 31 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:D-ribose-5-phosphate isomerase (RpiA), catalytic domain 82 c3gmgB_ not modelled 7.3 15 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein rv1825/mt1873; PDBTitle: crystal structure of an uncharacterized conserved protein2 from mycobacterium tuberculosis 83 d2eifa1 not modelled 7.3 14 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:eIF5a N-terminal domain-like 84 c2p5dA_ not modelled 7.3 32 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0310 protein mjecl36; PDBTitle: crystal structure of mjecl36 from methanocaldococcus2 jannaschii dsm 2661 85 c3gqjA_ not modelled 7.2 25 PDB header:unknown function Chain: A: PDB Molecule:cell inhibiting factor (cif); PDBTitle: crystal structure of cell inhibiting factor (cif) from photorhabdus2 luminescens 86 d2brfa1 not modelled 7.1 29 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 87 d1iz6a1 not modelled 7.0 14 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:eIF5a N-terminal domain-like 88 c3llbA_ not modelled 7.0 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of the protein pa3983 with unknown2 function from pseudomonas aeruginosa pao1 89 d3deda1 not modelled 7.0 11 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 90 c1yj5C_ not modelled 7.0 35 PDB header:transferase Chain: C: PDB Molecule:5' polynucleotide kinase-3' phosphatase fha domain; PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme 91 d2cowa1 not modelled 6.9 29 Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain 92 d1f3ta1 not modelled 6.7 22 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 93 c3hx1B_ not modelled 6.6 19 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:slr1951 protein; PDBTitle: crystal structure of the slr1951 protein from synechocystis sp.2 northeast structural genomics consortium target sgr167a 94 d2plia1 not modelled 6.5 16 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 95 d2o3ga1 not modelled 6.5 17 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 96 c3cfuA_ not modelled 6.5 28 PDB header:lipoprotein Chain: A: PDB Molecule:uncharacterized lipoprotein yjha; PDBTitle: crystal structure of the yjha protein from bacillus2 subtilis. northeast structural genomics consortium target3 sr562 97 d2toda1 not modelled 6.5 18 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 98 d2o1ra1 not modelled 6.4 11 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 99 d2ff4a3 not modelled 6.4 19 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain