Email l.a.kelley@imperial.ac.uk Description P0A6S5 Date Wed Jan 25 15:20:16 GMT 2012 Unique Job ID f5cc17cae7ee79d9

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2xzrA_ 80.8 5 PDB header:cell adhesion Chain: A: PDB Molecule:immunoglobulin-binding protein eibd; PDBTitle: escherichia coli immunoglobulin-binding protein eibd 391-438 fused2 to gcn4 adaptors 2 c1ci6B_ 78.6 22 PDB header:transcription Chain: B: PDB Molecule:transcription factor c/ebp beta; PDBTitle: transcription factor atf4-c/ebp beta bzip heterodimer 3 c2yy0D_ 77.5 14 PDB header:transcription Chain: D: PDB Molecule:c-myc-binding protein; PDBTitle: crystal structure of ms0802, c-myc-1 binding protein domain2 from homo sapiens 4 c2e43A_ 74.6 23 PDB header:transcription/dna Chain: A: PDB Molecule:ccaat/enhancer-binding protein beta; PDBTitle: crystal structure of c/ebpbeta bzip homodimer k269a mutant2 bound to a high affinity dna fragment 5 c1fosF_ 72.5 21 PDB header:transcription/dna Chain: F: PDB Molecule:c-jun proto-oncogene protein; PDBTitle: two human c-fos:c-jun:dna complexes 6 c1ci6A_ 72.3 16 PDB header:transcription Chain: A: PDB Molecule:transcription factor atf-4; PDBTitle: transcription factor atf4-c/ebp beta bzip heterodimer 7 c2xdjF_ 71.8 9 PDB header:unknown function Chain: F: PDB Molecule:uncharacterized protein ybgf; PDBTitle: crystal structure of the n-terminal domain of e.coli ybgf 8 c1fosE_ 69.8 28 PDB header:transcription/dna Chain: E: PDB Molecule:p55-c-fos proto-oncogene protein; PDBTitle: two human c-fos:c-jun:dna complexes 9 c1u2uA_ 69.7 38 PDB header:transcription Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: nmr solution structure of a designed heterodimeric leucine2 zipper 10 c3mudA_ 69.7 15 PDB header:contractile protein Chain: A: PDB Molecule:dna repair protein xrcc4, tropomyosin alpha-1 chain; PDBTitle: structure of the tropomyosin overlap complex from chicken smooth2 muscle 11 c1t2kD_ 67.5 15 PDB header:transcription/dna Chain: D: PDB Molecule:cyclic-amp-dependent transcription factor atf-2; PDBTitle: structure of the dna binding domains of irf3, atf-2 and jun2 bound to dna 12 c1gk7A_ 67.4 28 PDB header:vimentin Chain: A: PDB Molecule:vimentin; PDBTitle: human vimentin coil 1a fragment (1a) 13 c1ce0B_ 64.9 14 PDB header:hiv-1 envelope protein Chain: B: PDB Molecule:protein (leucine zipper model h38-p1); PDBTitle: trimerization specificity in hiv-1 gp41: analysis with a2 gcn4 leucine zipper model 14 c3m9bK_ 63.0 18 PDB header:chaperone Chain: K: PDB Molecule:proteasome-associated atpase; PDBTitle: crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa 15 c1dh3A_ 62.3 22 PDB header:transcription/dna Chain: A: PDB Molecule:transcription factor creb; PDBTitle: crystal structure of a creb bzip-cre complex reveals the2 basis for creb faimly selective dimerization and dna3 binding 16 c1cz7C_ 60.6 23 PDB header:contractile protein Chain: C: PDB Molecule:microtubule motor protein ncd; PDBTitle: the crystal structure of a minus-end directed microtubule2 motor protein ncd reveals variable dimer conformations 17 d1nkpa_ 58.6 21 Fold:HLH-like Superfamily:HLH, helix-loop-helix DNA-binding domain Family:HLH, helix-loop-helix DNA-binding domain 18 c1ij3C_ 57.1 15 PDB header:transcription Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position 19 c1ij3B_ 57.1 15 PDB header:transcription Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position 20 c1ij2C_ 56.9 15 PDB header:transcription Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvtl coiled-coil trimer with threonine at the a(16)2 position 21 c1rb1B_ not modelled 56.6 15 PDB header:dna binding protein Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution 22 c1swiA_ not modelled 56.6 15 PDB header:leucine zipper Chain: A: PDB Molecule:gcn4p1; PDBTitle: gcn4-leucine zipper core mutant as n16a complexed with2 benzene 23 c1rb6C_ not modelled 56.6 15 PDB header:dna binding protein Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: antiparallel trimer of gcn4-leucine zipper core mutant as2 n16a tetragonal form 24 c3k7zB_ not modelled 56.6 15 PDB header:dna binding protein Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution 25 c1rb1A_ not modelled 56.6 15 PDB header:dna binding protein Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution 26 c3k7zA_ not modelled 56.6 15 PDB header:dna binding protein Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution 27 c1gd2G_ not modelled 56.0 18 PDB header:transcription/dna Chain: G: PDB Molecule:transcription factor pap1; PDBTitle: crystal structure of bzip transcription factor pap1 bound2 to dna 28 d1ivsa1 not modelled 55.8 17 Fold:Long alpha-hairpin Superfamily:tRNA-binding arm Family:Valyl-tRNA synthetase (ValRS) C-terminal domain 29 c1fmhA_ not modelled 55.5 35 PDB header:transcription Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: nmr solution structure of a designed heterodimeric leucine2 zipper 30 d1nkpb_ not modelled 55.1 18 Fold:HLH-like Superfamily:HLH, helix-loop-helix DNA-binding domain Family:HLH, helix-loop-helix DNA-binding domain 31 c2gd7B_ not modelled 54.5 25 PDB header:transcription Chain: B: PDB Molecule:hexim1 protein; PDBTitle: the structure of the cyclin t-binding domain of hexim12 reveals the molecular basis for regulation of3 transcription elongation 32 c1ij2B_ not modelled 54.0 15 PDB header:transcription Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvtl coiled-coil trimer with threonine at the a(16)2 position 33 c2w6bA_ not modelled 53.9 20 PDB header:signaling protein Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 7; PDBTitle: crystal structure of the trimeric beta-pix coiled-coil2 domain 34 c2o7hF_ not modelled 53.0 15 PDB header:transcription Chain: F: PDB Molecule:general control protein gcn4; PDBTitle: crystal structure of trimeric coiled coil gcn4 leucine zipper 35 d2azeb1 not modelled 52.4 11 Fold:E2F-DP heterodimerization region Superfamily:E2F-DP heterodimerization region Family:E2F dimerization segment 36 c2wt7B_ not modelled 52.1 14 PDB header:transcription Chain: B: PDB Molecule:transcription factor mafb; PDBTitle: crystal structure of the bzip heterodimeric complex2 mafb:cfos bound to dna 37 c1wpaA_ not modelled 52.1 12 PDB header:cell adhesion Chain: A: PDB Molecule:occludin; PDBTitle: 1.5 angstrom crystal structure of human occludin fragment2 413-522 38 c2j5uB_ not modelled 51.9 18 PDB header:cell shape regulation Chain: B: PDB Molecule:mrec protein; PDBTitle: mrec lysteria monocytogenes 39 c2wvrB_ not modelled 51.7 15 PDB header:replication Chain: B: PDB Molecule:geminin; PDBTitle: human cdt1:geminin complex 40 d1r05a_ not modelled 50.8 24 Fold:HLH-like Superfamily:HLH, helix-loop-helix DNA-binding domain Family:HLH, helix-loop-helix DNA-binding domain 41 c1ztaA_ not modelled 49.8 20 PDB header:dna-binding motif Chain: A: PDB Molecule:leucine zipper monomer; PDBTitle: the solution structure of a leucine-zipper motif peptide 42 c2oqqB_ not modelled 49.2 14 PDB header:transcription Chain: B: PDB Molecule:transcription factor hy5; PDBTitle: crystal structure of hy5 leucine zipper homodimer from2 arabidopsis thaliana 43 c2jeeA_ not modelled 48.8 14 PDB header:cell cycle Chain: A: PDB Molecule:yiiu; PDBTitle: xray structure of e. coli yiiu 44 c3n4xB_ not modelled 46.2 16 PDB header:replication Chain: B: PDB Molecule:monopolin complex subunit csm1; PDBTitle: structure of csm1 full-length 45 c2wg6L_ not modelled 45.6 17 PDB header:transcription,hydrolase Chain: L: PDB Molecule:general control protein gcn4, PDBTitle: proteasome-activating nucleotidase (pan) n-domain (57-134)2 from archaeoglobus fulgidus fused to gcn4, p61a mutant 46 c3a5tB_ not modelled 45.3 23 PDB header:transcription regulator/dna Chain: B: PDB Molecule:transcription factor mafg; PDBTitle: crystal structure of mafg-dna complex 47 c1wt6B_ not modelled 44.6 21 PDB header:transferase Chain: B: PDB Molecule:myotonin-protein kinase; PDBTitle: coiled-coil domain of dmpk 48 c1xawA_ not modelled 44.3 12 PDB header:cell adhesion Chain: A: PDB Molecule:occludin; PDBTitle: crystal structure of the cytoplasmic distal c-terminal2 domain of occludin 49 c3mkxC_ not modelled 41.2 14 PDB header:antiviral protein Chain: C: PDB Molecule:bone marrow stromal antigen 2; PDBTitle: crystal structure of bst2/tetherin 50 d1an2a_ not modelled 40.1 18 Fold:HLH-like Superfamily:HLH, helix-loop-helix DNA-binding domain Family:HLH, helix-loop-helix DNA-binding domain 51 c3kinB_ not modelled 39.4 16 PDB header:motor protein Chain: B: PDB Molecule:kinesin heavy chain; PDBTitle: kinesin (dimeric) from rattus norvegicus 52 c3q4fG_ not modelled 39.0 32 PDB header:dna binding protein/protein binding Chain: G: PDB Molecule:dna repair protein xrcc4; PDBTitle: crystal structure of xrcc4/xlf-cernunnos complex 53 c3oa7A_ not modelled 38.5 16 PDB header:structural protein Chain: A: PDB Molecule:head morphogenesis protein, chaotic nuclear migration PDBTitle: structure of the c-terminal domain of cnm67, a core component of the2 spindle pole body of saccharomyces cerevisiae 54 c2w6aB_ not modelled 32.8 22 PDB header:signaling protein Chain: B: PDB Molecule:arf gtpase-activating protein git1; PDBTitle: x-ray structure of the dimeric git1 coiled-coil domain 55 c1junB_ not modelled 32.6 21 PDB header:transcription regulation Chain: B: PDB Molecule:c-jun homodimer; PDBTitle: nmr study of c-jun homodimer 56 c3he5A_ not modelled 32.3 24 PDB header:de novo protein Chain: A: PDB Molecule:synzip1; PDBTitle: heterospecific coiled-coil pair synzip2:synzip1 57 c2wukD_ not modelled 32.2 15 PDB header:cell cycle Chain: D: PDB Molecule:septum site-determining protein diviva; PDBTitle: diviva n-terminal domain, f17a mutant 58 c2zxxA_ not modelled 31.8 15 PDB header:cell cycle/replication Chain: A: PDB Molecule:geminin; PDBTitle: crystal structure of cdt1/geminin complex 59 d1nlwe_ not modelled 31.8 17 Fold:HLH-like Superfamily:HLH, helix-loop-helix DNA-binding domain Family:HLH, helix-loop-helix DNA-binding domain 60 c1dipA_ not modelled 31.5 15 PDB header:acetylation Chain: A: PDB Molecule:delta-sleep-inducing peptide immunoreactive PDBTitle: the solution structure of porcine delta-sleep-inducing2 peptide immunoreactive peptide, nmr, 10 structures 61 c2x7aB_ not modelled 29.7 12 PDB header:immune system Chain: B: PDB Molecule:bone marrow stromal antigen 2; PDBTitle: structural basis of hiv-1 tethering to membranes by the2 bst2-tetherin ectodomain 62 d1uklc_ not modelled 29.4 25 Fold:HLH-like Superfamily:HLH, helix-loop-helix DNA-binding domain Family:HLH, helix-loop-helix DNA-binding domain 63 d1fxkc_ not modelled 29.2 12 Fold:Long alpha-hairpin Superfamily:Prefoldin Family:Prefoldin 64 c1x4qA_ not modelled 27.3 25 PDB header:rna binding protein Chain: A: PDB Molecule:u4/u6 small nuclear ribonucleoprotein prp3; PDBTitle: solution structure of pwi domain in u4/u6 small nuclear2 ribonucleoprotein prp3(hprp3) 65 c1t6fA_ not modelled 26.9 21 PDB header:cell cycle Chain: A: PDB Molecule:geminin; PDBTitle: crystal structure of the coiled-coil dimerization motif of2 geminin 66 c2a93B_ not modelled 26.8 21 PDB header:leucine zippers Chain: B: PDB Molecule:c-myc-max heterodimeric leucine zipper; PDBTitle: nmr solution structure of the c-myc-max heterodimeric2 leucine zipper, 40 structures 67 c2v4hA_ not modelled 26.6 17 PDB header:transcription Chain: A: PDB Molecule:nf-kappa-b essential modulator; PDBTitle: nemo cc2-lz domain - 1d5 darpin complex 68 d2e74h1 not modelled 25.7 29 Fold:Single transmembrane helix Superfamily:PetN subunit of the cytochrome b6f complex Family:PetN subunit of the cytochrome b6f complex 69 c2e74H_ not modelled 25.0 29 PDB header:photosynthesis Chain: H: PDB Molecule:cytochrome b6-f complex subunit 8; PDBTitle: crystal structure of the cytochrome b6f complex from m.laminosus 70 c2efrB_ not modelled 24.2 18 PDB header:contractile protein Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain; PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution 71 c3tlxA_ not modelled 24.0 19 PDB header:transferase Chain: A: PDB Molecule:adenylate kinase 2; PDBTitle: crystal structure of pf10_0086, adenylate kinase from plasmodium2 falciparum 72 c2e75H_ not modelled 23.6 29 PDB header:photosynthesis Chain: H: PDB Molecule:cytochrome b6-f complex subunit 8; PDBTitle: crystal structure of the cytochrome b6f complex with 2-nonyl-4-2 hydroxyquinoline n-oxide (nqno) from m.laminosus 73 c2e76H_ not modelled 23.6 29 PDB header:photosynthesis Chain: H: PDB Molecule:cytochrome b6-f complex subunit 8; PDBTitle: crystal structure of the cytochrome b6f complex with tridecyl-2 stigmatellin (tds) from m.laminosus 74 d2oa5a1 not modelled 23.5 18 Fold:BLRF2-like Superfamily:BLRF2-like Family:BLRF2-like 75 c1deqO_ not modelled 23.3 9 PDB header: PDB COMPND: 76 d1nlwa_ not modelled 23.1 10 Fold:HLH-like Superfamily:HLH, helix-loop-helix DNA-binding domain Family:HLH, helix-loop-helix DNA-binding domain 77 c3he4F_ not modelled 22.8 24 PDB header:de novo protein Chain: F: PDB Molecule:synzip5; PDBTitle: heterospecific coiled-coil pair synzip5:synzip6 78 c3hnwB_ not modelled 22.5 15 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a basic coiled-coil protein of unknown function2 from eubacterium eligens atcc 27750 79 c3ol1A_ not modelled 22.4 8 PDB header:structural protein Chain: A: PDB Molecule:vimentin; PDBTitle: crystal structure of vimentin (fragment 144-251) from homo sapiens,2 northeast structural genomics consortium target hr4796b 80 c3hizB_ not modelled 22.0 10 PDB header:transferase/oncoprotein Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit PDBTitle: crystal structure of p110alpha h1047r mutant in complex with2 nish2 of p85alpha 81 c1jccC_ not modelled 21.9 13 PDB header:membrane protein Chain: C: PDB Molecule:major outer membrane lipoprotein; PDBTitle: crystal structure of a novel alanine-zipper trimer at 1.7 a2 resolution, v13a,l16a,v20a,l23a,v27a,m30a,v34a mutations 82 c1vf5H_ not modelled 21.6 29 PDB header:photosynthesis Chain: H: PDB Molecule:protein pet n; PDBTitle: crystal structure of cytochrome b6f complex from m.laminosus 83 c1vf5U_ not modelled 21.6 29 PDB header:photosynthesis Chain: U: PDB Molecule:protein pet n; PDBTitle: crystal structure of cytochrome b6f complex from m.laminosus 84 c1ihqA_ not modelled 21.3 23 PDB header:de novo protein Chain: A: PDB Molecule:chimeric peptide glytm1bzip: tropomyosin alpha PDBTitle: glytm1bzip: a chimeric peptide model of the n-terminus of a2 rat short alpha tropomyosin with the n-terminus encoded by3 exon 1b 85 c1l8dB_ not modelled 20.7 24 PDB header:replication Chain: B: PDB Molecule:dna double-strand break repair rad50 atpase; PDBTitle: rad50 coiled-coil zn hook 86 c2l5gA_ not modelled 20.7 13 PDB header:transcription regulator Chain: A: PDB Molecule:g protein pathway suppressor 2; PDBTitle: co-ordinates and 1h, 13c and 15n chemical shift assignments for the2 complex of gps2 53-90 and smrt 167-207 87 c1hf9B_ not modelled 20.4 9 PDB header:atpase inhibitor Chain: B: PDB Molecule:atpase inhibitor (mitochondrial); PDBTitle: c-terminal coiled-coil domain from bovine if1 88 c3qh9A_ not modelled 19.2 18 PDB header:structural protein Chain: A: PDB Molecule:liprin-beta-2; PDBTitle: human liprin-beta2 coiled-coil 89 c1ik9B_ not modelled 18.2 15 PDB header:gene regulation/ligase Chain: B: PDB Molecule:dna repair protein xrcc4; PDBTitle: crystal structure of a xrcc4-dna ligase iv complex 90 c2zt9H_ not modelled 17.5 29 PDB header:photosynthesis Chain: H: PDB Molecule:cytochrome b6-f complex subunit 8; PDBTitle: crystal structure of the cytochrome b6f complex from nostoc sp. pcc2 7120 91 c1p9iA_ not modelled 17.1 33 PDB header:unknown function Chain: A: PDB Molecule:cortexillin i/gcn4 hybrid peptide; PDBTitle: coiled-coil x-ray structure at 1.17 a resolution 92 c3he4A_ not modelled 16.9 26 PDB header:de novo protein Chain: A: PDB Molecule:synzip6; PDBTitle: heterospecific coiled-coil pair synzip5:synzip6 93 c1u2uB_ not modelled 16.9 33 PDB header:transcription Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: nmr solution structure of a designed heterodimeric leucine2 zipper 94 c2d2cU_ not modelled 16.8 29 PDB header:photosynthesis Chain: U: PDB Molecule:cytochrome b6-f complex subunit viii; PDBTitle: crystal structure of cytochrome b6f complex with dbmib from2 m. laminosus 95 c2d2cH_ not modelled 16.8 29 PDB header:photosynthesis Chain: H: PDB Molecule:cytochrome b6-f complex subunit viii; PDBTitle: crystal structure of cytochrome b6f complex with dbmib from2 m. laminosus 96 c1u0iA_ not modelled 16.7 25 PDB header:de novo protein Chain: A: PDB Molecule:iaal-e3; PDBTitle: iaal-e3/k3 heterodimer 97 c2zvnF_ not modelled 16.4 17 PDB header:signaling protein/transcription Chain: F: PDB Molecule:nf-kappa-b essential modulator; PDBTitle: nemo cozi domain incomplex with diubiquitin in p2121212 space group 98 c3a7pB_ not modelled 15.8 9 PDB header:protein transport Chain: B: PDB Molecule:autophagy protein 16; PDBTitle: the crystal structure of saccharomyces cerevisiae atg16 99 c2ke4A_ not modelled 14.9 10 PDB header:membrane protein Chain: A: PDB Molecule:cdc42-interacting protein 4; PDBTitle: the nmr structure of the tc10 and cdc42 interacting domain2 of cip4