Email l.a.kelley@imperial.ac.uk Description P15070 Date Thu Jan 5 11:34:34 GMT 2012 Unique Job ID f48f842527985c7d

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1o6aa_ 99.9 55 Fold:Surface presentation of antigens (SPOA) Superfamily:Surface presentation of antigens (SPOA) Family:Surface presentation of antigens (SPOA) 2 d1o9ya_ 99.8 27 Fold:Surface presentation of antigens (SPOA) Superfamily:Surface presentation of antigens (SPOA) Family:Surface presentation of antigens (SPOA) 3 c2k5fA_ 58.6 29 PDB header:metal transport Chain: A: PDB Molecule:ferrous iron transport protein a; PDBTitle: solution nmr structure of feoa protein from chlorobium2 tepidum. northeast structural genomics consortium target3 ctr121 4 d2gcxa1 56.8 23 Fold:SH3-like barrel Superfamily:C-terminal domain of transcriptional repressors Family:FeoA-like 5 c2k5lA_ 46.5 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:feoa; PDBTitle: solution nmr structure of protein feoa from clostridium2 thermocellum, northeast structural genomics consortium3 target cmr17 6 c2k4yA_ 46.1 23 PDB header:metal transport Chain: A: PDB Molecule:feoa-like protein; PDBTitle: nmr structure of feoa-like protein from clostridium2 acetobutylicum: northeast structural genomics consortium3 target car178 7 c3mhxB_ 32.6 27 PDB header:metal transport Chain: B: PDB Molecule:putative ferrous iron transport protein a; PDBTitle: crystal structure of stenotrophomonas maltophilia feoa complexed with2 zinc: a unique procaryotic sh3 domain protein possibly acting as a3 bacterial ferrous iron transport activating factor 8 c2k5iA_ 32.1 19 PDB header:metal transport Chain: A: PDB Molecule:iron transport protein; PDBTitle: solution structure of iron(ii) transport protein a from2 clostridium thermocellum , northeast structural genomics3 consortium (nesg) target vr131 9 c3gt2A_ 29.5 17 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of the p60 domain from m. avium2 paratuberculosis antigen map1272c 10 d3bwud1 26.5 21 Fold:FimD N-terminal domain-like Superfamily:FimD N-terminal domain-like Family:Usher N-domain 11 d1m5q1_ 26.3 13 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 12 d1wmxb_ 24.4 11 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:Family 30 carbohydrate binding module, CBM30 (PKD repeat) 13 d1zdva1 24.0 31 Fold:FimD N-terminal domain-like Superfamily:FimD N-terminal domain-like Family:Usher N-domain 14 c3ddyA_ 23.5 19 PDB header:luminescent protein Chain: A: PDB Molecule:lumazine protein; PDBTitle: structure of lumazine protein, an optical transponder of luminescent2 bacteria 15 d2h3ja1 23.3 17 Fold:SH3-like barrel Superfamily:C-terminal domain of transcriptional repressors Family:FeoA-like 16 c2glvA_ 22.0 21 PDB header:lyase Chain: A: PDB Molecule:(3r)-hydroxymyristoyl-acyl carrier protein PDBTitle: crystal structure of (3r)-hydroxyacyl-acyl carrier protein2 dehydratase(fabz) mutant(y100a) from helicobacter pylori 17 c2e63A_ 20.8 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:kiaa1787 protein; PDBTitle: solution structure of the neuz domain in kiaa1787 protein 18 c2fg0B_ 20.3 11 PDB header:hydrolase Chain: B: PDB Molecule:cog0791: cell wall-associated hydrolases (invasion- PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (npun_r0659) from nostoc punctiforme pcc 73102 at 1.793 a resolution 19 d2evra2 20.1 11 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:NlpC/P60 20 c3e19D_ 19.2 26 PDB header:transcription regulator, metal binding p Chain: D: PDB Molecule:feoa; PDBTitle: crystal structure of iron uptake regulatory protein (feoa) solved by2 sulfur sad in a monoclinic space group 21 d2isba1 not modelled 19.0 33 Fold:The "swivelling" beta/beta/alpha domain Superfamily:FumA C-terminal domain-like Family:FumA C-terminal domain-like 22 c2kytA_ not modelled 17.9 7 PDB header:hydrolase Chain: A: PDB Molecule:group xvi phospholipase a2; PDBTitle: solution struture of the h-rev107 n-terminal domain 23 d1zdxa1 not modelled 17.8 26 Fold:FimD N-terminal domain-like Superfamily:FimD N-terminal domain-like Family:Usher N-domain 24 c3pbiA_ not modelled 17.3 15 PDB header:hydrolase Chain: A: PDB Molecule:invasion protein; PDBTitle: structure of the peptidoglycan hydrolase ripb (rv1478) from2 mycobacterium tuberculosis at 1.6 resolution 25 c2xivA_ not modelled 15.9 19 PDB header:structural protein Chain: A: PDB Molecule:hypothetical invasion protein; PDBTitle: structure of rv1477, hypothetical invasion protein of2 mycobacterium tuberculosis 26 c1i8dB_ not modelled 15.3 18 PDB header:transferase Chain: B: PDB Molecule:riboflavin synthase; PDBTitle: crystal structure of riboflavin synthase 27 c3hruA_ not modelled 15.2 16 PDB header:transcription Chain: A: PDB Molecule:metalloregulator scar; PDBTitle: crystal structure of scar with bound zn2+ 28 c3cw1D_ not modelled 14.9 16 PDB header:splicing Chain: D: PDB Molecule:small nuclear ribonucleoprotein sm d3; PDBTitle: crystal structure of human spliceosomal u1 snrnp 29 c2gl0A_ not modelled 14.9 22 PDB header:transferase Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: structure of pae2307 in complex with adenosine 30 d1u1za_ not modelled 14.7 6 Fold:Thioesterase/thiol ester dehydrase-isomerase Superfamily:Thioesterase/thiol ester dehydrase-isomerase Family:FabZ-like 31 d1vgga_ not modelled 14.6 16 Fold:Ta1353-like Superfamily:Ta1353-like Family:Ta1353-like 32 c2d16B_ not modelled 14.3 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein ph1918; PDBTitle: crystal structure of ph1918 protein from pyrococcus horikoshii ot3 33 c2ekmC_ not modelled 14.2 23 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:hypothetical protein st1511; PDBTitle: structure of st1219 protein from sulfolobus tokodaii 34 c3swnC_ not modelled 13.6 10 PDB header:rna binding protein Chain: C: PDB Molecule:u6 snrna-associated sm-like protein lsm7; PDBTitle: structure of the lsm657 complex: an assembly intermediate of the lsm12 7 and lsm2 8 rings 35 d1i4k1_ not modelled 13.2 14 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 36 d1vyua1 not modelled 12.6 6 Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain 37 c3cw15_ not modelled 12.0 19 PDB header:splicing Chain: 5: PDB Molecule:small nuclear ribonucleoprotein g; PDB Fragment:residues 1-215; PDBTitle: crystal structure of human spliceosomal u1 snrnp 38 d2je8a4 not modelled 11.8 15 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:beta-Galactosidase/glucuronidase, N-terminal domain 39 d1t0ha_ not modelled 11.7 12 Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain 40 c2glwA_ not modelled 11.5 14 PDB header:transcription Chain: A: PDB Molecule:92aa long hypothetical protein; PDBTitle: the solution structure of phs018 from pyrococcus horikoshii 41 d4fiva_ not modelled 10.9 27 Fold:Acid proteases Superfamily:Acid proteases Family:Retroviral protease (retropepsin) 42 c2pn0D_ not modelled 10.6 31 PDB header:transcription Chain: D: PDB Molecule:prokaryotic transcription elongation factor PDBTitle: prokaryotic transcription elongation factor grea/greb from2 nitrosomonas europaea 43 d2as0a1 not modelled 10.6 23 Fold:PUA domain-like Superfamily:PUA domain-like Family:Hypothetical RNA methyltransferase domain (HRMD) 44 d1n9ra_ not modelled 10.3 13 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 45 c1b34A_ not modelled 10.2 16 PDB header:rna binding protein Chain: A: PDB Molecule:protein (small nuclear ribonucleoprotein sm d1); PDBTitle: crystal structure of the d1d2 sub-complex from the human snrnp core2 domain 46 d1b34a_ not modelled 10.2 16 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 47 c3a35B_ not modelled 9.9 17 PDB header:luminescent protein Chain: B: PDB Molecule:lumazine protein; PDBTitle: crystal structure of lump complexed with riboflavin 48 d2axwa1 not modelled 9.7 19 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Bacterial adhesins Family:Pilus subunits 49 d1d3ba_ not modelled 9.6 16 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 50 c3d37A_ not modelled 9.5 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:tail protein, 43 kda; PDBTitle: the crystal structure of the tail protein from neisseria meningitidis2 mc58 51 d1t3la1 not modelled 9.2 12 Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain 52 d2fwka1 not modelled 8.9 13 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 53 d1eika_ not modelled 8.9 14 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 54 c3f3bA_ not modelled 8.9 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:phage-like element pbsx protein xkdh; PDBTitle: structure of the phage-like element pbsx protein xkdh from2 bacillus subtilus. northeast structural genomics3 consortium target sr352. 55 c1n9sH_ not modelled 8.6 13 PDB header:translation Chain: H: PDB Molecule:small nuclear ribonucleoprotein f; PDBTitle: crystal structure of yeast smf in spacegroup p43212 56 c1t0jA_ not modelled 8.5 12 PDB header:signaling protein Chain: A: PDB Molecule:voltage-gated calcium channel subunit beta2a; PDBTitle: crystal structure of a complex between voltage-gated calcium channel2 beta2a subunit and a peptide of the alpha1c subunit 57 d1hmja_ not modelled 8.4 16 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 58 d1wmxa_ not modelled 8.1 8 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:Family 30 carbohydrate binding module, CBM30 (PKD repeat) 59 d1i8fa_ not modelled 8.1 11 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 60 c3fcgB_ not modelled 8.1 27 PDB header:membrane protein, protein transport Chain: B: PDB Molecule:f1 capsule-anchoring protein; PDBTitle: crystal structure analysis of the middle domain of the2 caf1a usher 61 c3swnA_ not modelled 7.7 18 PDB header:rna binding protein Chain: A: PDB Molecule:u6 snrna-associated sm-like protein lsm5; PDBTitle: structure of the lsm657 complex: an assembly intermediate of the lsm12 7 and lsm2 8 rings 62 d1h641_ not modelled 7.6 8 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 63 c1fx7C_ not modelled 7.5 6 PDB header:signaling protein Chain: C: PDB Molecule:iron-dependent repressor ider; PDBTitle: crystal structure of the iron-dependent regulator (ider)2 from mycobacterium tuberculosis 64 c1wruA_ not modelled 7.4 14 PDB header:structural protein Chain: A: PDB Molecule:43 kda tail protein; PDBTitle: structure of central hub elucidated by x-ray analysis of gene product2 44; baseplate component of bacteriophage mu 65 c3butA_ not modelled 7.3 38 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein af_0446; PDBTitle: crystal structure of protein af_0446 from archaeoglobus fulgidus 66 d1dzfa2 not modelled 7.3 25 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 67 d1d1na_ not modelled 7.1 26 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Translation proteins Family:Elongation factors 68 d1jz8a3 not modelled 6.8 17 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:beta-Galactosidase/glucuronidase, N-terminal domain 69 c3h41A_ not modelled 6.7 14 PDB header:hydrolase Chain: A: PDB Molecule:nlp/p60 family protein; PDBTitle: crystal structure of a nlpc/p60 family protein (bce_2878) from2 bacillus cereus atcc 10987 at 1.79 a resolution 70 c3h0gE_ not modelled 6.6 25 PDB header:transcription Chain: E: PDB Molecule:dna-directed rna polymerases i, ii, and iii PDBTitle: rna polymerase ii from schizosaccharomyces pombe 71 c2fwkB_ not modelled 6.4 14 PDB header:dna binding protein Chain: B: PDB Molecule:u6 snrna-associated sm-like protein lsm5; PDBTitle: crystal structure of cryptosporidium parvum u6 snrna-associated sm-2 like protein lsm5 72 d2pw9a1 not modelled 6.4 25 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:FdhD/NarQ 73 c2fvnA_ not modelled 6.3 19 PDB header:cell adhesion Chain: A: PDB Molecule:protein afad; PDBTitle: the fibrillar tip complex of the afa/dr adhesins from2 pathogen e. coli displays synergistic binding to 5 1 and v3 3 integrins 74 d1n9sc_ not modelled 6.3 13 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 75 c2dlpA_ not modelled 6.2 27 PDB header:structural protein Chain: A: PDB Molecule:kiaa1783 protein; PDBTitle: solution structure of the sh3 domain of human kiaa17832 protein 76 c3cw1Z_ not modelled 6.2 22 PDB header:splicing Chain: Z: PDB Molecule:small nuclear ribonucleoprotein f; PDBTitle: crystal structure of human spliceosomal u1 snrnp 77 d1mgqa_ not modelled 6.2 16 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 78 c2yueA_ not modelled 6.0 7 PDB header:rna binding protein Chain: A: PDB Molecule:protein neuralized; PDBTitle: solution structure of the neuz (nhr) domain in neuralized2 from drosophila melanogaster 79 c3swnT_ not modelled 6.0 11 PDB header:rna binding protein Chain: T: PDB Molecule:u6 snrna-associated sm-like protein lsm6; PDBTitle: structure of the lsm657 complex: an assembly intermediate of the lsm12 7 and lsm2 8 rings 80 d1jbma_ not modelled 5.9 16 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 81 d1o91a_ not modelled 5.7 17 Fold:TNF-like Superfamily:TNF-like Family:TNF-like 82 c1o91B_ not modelled 5.7 17 PDB header:collagen Chain: B: PDB Molecule:collagen alpha 1(viii) chain; PDBTitle: crystal structure of a collagen viii nc1 domain trimer 83 d1ljoa_ not modelled 5.6 13 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 84 d1d3bb_ not modelled 5.6 8 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 85 c3d6xA_ not modelled 5.5 27 PDB header:lyase Chain: A: PDB Molecule:(3r)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; PDBTitle: crystal structure of campylobacter jejuni fabz 86 d1p9ka_ not modelled 5.5 24 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:YbcJ-like 87 c3dzoA_ not modelled 5.3 16 PDB header:transferase Chain: A: PDB Molecule:rhoptry kinase domain; PDBTitle: crystal structure of a rhoptry kinase from toxoplasma gondii 88 d1yq2a3 not modelled 5.3 21 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:beta-Galactosidase/glucuronidase, N-terminal domain 89 c3cnrA_ not modelled 5.2 23 PDB header:unknown function Chain: A: PDB Molecule:type iv fimbriae assembly protein; PDBTitle: crystal structure of pilz (xac1133) from xanthomonas2 axonopodis pv citri 90 c1zyiA_ not modelled 5.2 11 PDB header:translation Chain: A: PDB Molecule:methylosome subunit picln; PDBTitle: solution structure of icln, a multifunctional protein2 involved in regulatory mechanisms as different as cell3 volume regulation and rna splicing 91 d2cnda1 not modelled 5.2 33 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 92 d2bmwa1 not modelled 5.0 33 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like