Email l.a.kelley@imperial.ac.uk Description P77779 Date Thu Jan 5 12:32:45 GMT 2012 Unique Job ID f3c6b0c7d5189d78

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3mswA_ 70.3 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a protein with unknown function (bf3112) from2 bacteroides fragilis nctc 9343 at 1.90 a resolution 2 c2zxeB_ 53.9 16 PDB header:hydrolase/transport protein Chain: B: PDB Molecule:na+,k+-atpase beta subunit; PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state 3 d1bdsa_ 40.2 56 Fold:Defensin-like Superfamily:Defensin-like Family:Defensin 4 d1x3za1 36.1 22 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Transglutaminase core 5 c2yy0D_ 19.9 30 PDB header:transcription Chain: D: PDB Molecule:c-myc-binding protein; PDBTitle: crystal structure of ms0802, c-myc-1 binding protein domain2 from homo sapiens 6 d2b5id2 19.4 38 Fold:Complement control module/SCR domain Superfamily:Complement control module/SCR domain Family:Complement control module/SCR domain 7 c3ga2A_ 17.2 33 PDB header:hydrolase Chain: A: PDB Molecule:endonuclease v; PDBTitle: crystal structure of the endonuclease_v (bsu36170) from2 bacillus subtilis, northeast structural genomics3 consortium target sr624 8 d2p0sa1 16.2 44 Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:PG0945 N-terminal domain-like 9 d1f00i2 14.1 30 Fold:Immunoglobulin-like beta-sandwich Superfamily:Invasin/intimin cell-adhesion fragments Family:Invasin/intimin cell-adhesion fragments 10 c3eswA_ 13.6 22 PDB header:hydrolase Chain: A: PDB Molecule:peptide-n(4)-(n-acetyl-beta-glucosaminyl)asparagine PDBTitle: complex of yeast pngase with glcnac2-iac. 11 d3bi7a1 10.8 25 Fold:PUA domain-like Superfamily:PUA domain-like Family:SRA domain-like 12 c2pb7A_ 10.5 26 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase uhrf1; PDBTitle: crystal structure of the sra domain of the human uhrf12 protein 13 c3swyB_ 10.3 67 PDB header:transport protein Chain: B: PDB Molecule:cyclic nucleotide-gated cation channel alpha-3; PDBTitle: cnga3 626-672 containing clz domain 14 d2f4ma1 9.9 24 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Transglutaminase core 15 d2zkda1 9.7 25 Fold:PUA domain-like Superfamily:PUA domain-like Family:SRA domain-like 16 d1bcoa1 9.7 17 Fold:mu transposase, C-terminal domain Superfamily:mu transposase, C-terminal domain Family:mu transposase, C-terminal domain 17 d1nlna_ 9.5 21 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Adenain-like 18 c3nfvA_ 9.3 40 PDB header:lyase Chain: A: PDB Molecule:alginate lyase; PDBTitle: crystal structure of an alginate lyase (bacova_01668) from bacteroides2 ovatus at 1.95 a resolution 19 c3q0bX_ 9.2 14 PDB header:transferase/dna Chain: X: PDB Molecule:histone-lysine n-methyltransferase, h3 lysine-9 specific PDBTitle: crystal structure of suvh5 sra- fully methylated cg dna complex in2 space group p42212 20 c3lhrA_ 9.1 32 PDB header:transcription regulator Chain: A: PDB Molecule:zinc finger protein 24; PDBTitle: crystal structure of the scan domain from human znf24 21 c3e21A_ not modelled 8.7 29 PDB header:apoptosis Chain: A: PDB Molecule:fas-associated factor 1; PDBTitle: crystal structure of faf-1 uba domain 22 d1brwa3 not modelled 8.3 26 Fold:alpha/beta-Hammerhead Superfamily:Pyrimidine nucleoside phosphorylase C-terminal domain Family:Pyrimidine nucleoside phosphorylase C-terminal domain 23 d2zo1b1 not modelled 8.2 26 Fold:PUA domain-like Superfamily:PUA domain-like Family:SRA domain-like 24 d2fi2a1 not modelled 8.1 40 Fold:Acyl carrier protein-like Superfamily:Retrovirus capsid dimerization domain-like Family:SCAN domain 25 d2tpta3 not modelled 7.5 19 Fold:alpha/beta-Hammerhead Superfamily:Pyrimidine nucleoside phosphorylase C-terminal domain Family:Pyrimidine nucleoside phosphorylase C-terminal domain 26 c3osvC_ not modelled 7.4 17 PDB header:structural protein Chain: C: PDB Molecule:flagellar basal-body rod modification protein flgd; PDBTitle: the crytsal structure of flgd from p. aeruginosa 27 d1y7qa1 not modelled 6.9 56 Fold:Acyl carrier protein-like Superfamily:Retrovirus capsid dimerization domain-like Family:SCAN domain 28 c3i08D_ not modelled 6.8 28 PDB header:signaling protein Chain: D: PDB Molecule:neurogenic locus notch homolog protein 1; PDBTitle: crystal structure of the s1-cleaved notch1 negative2 regulatory region (nrr) 29 d1pk6c_ not modelled 6.8 27 Fold:TNF-like Superfamily:TNF-like Family:TNF-like 30 c2wbmA_ not modelled 6.7 26 PDB header:rna-binding protein Chain: A: PDB Molecule:ribosome maturation protein sdo1 homolog; PDBTitle: crystal structure of mthsbds, the homologue of the2 shwachman-bodian-diamond syndrome protein in the3 euriarchaeon methanothermobacter thermautotrophicus 31 c2ka3C_ not modelled 6.5 36 PDB header:structural protein Chain: C: PDB Molecule:emilin-1; PDBTitle: structure of emilin-1 c1q-like domain 32 c1t95A_ not modelled 6.5 22 PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein af0491; PDBTitle: crystal structure of the shwachman-bodian-diamond syndrome2 protein orthologue from archaeoglobus fulgidus 33 c1v7fA_ not modelled 6.4 67 PDB header:toxin Chain: A: PDB Molecule:phrixotoxin 1; PDBTitle: solution structure of phrixotoxin 1 34 d1v7fa_ not modelled 6.4 67 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:omega toxin-like Family:Spider toxins 35 c2ketA_ not modelled 6.4 60 PDB header:antibiotic Chain: A: PDB Molecule:cathelicidin-6; PDBTitle: solution structure of bmap-27 36 d2doaa1 not modelled 6.3 26 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:ELL N2 domain-like 37 c1hcwA_ not modelled 6.3 42 PDB header:growth response protein Chain: A: PDB Molecule:bba1; PDBTitle: 23-residue designed metal-free peptide based on the zinc2 finger domains, nmr, 35 structures 38 d1pk6b_ not modelled 6.2 27 Fold:TNF-like Superfamily:TNF-like Family:TNF-like 39 d1zud21 not modelled 6.0 18 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:ThiS 40 d1pk6a_ not modelled 6.0 27 Fold:TNF-like Superfamily:TNF-like Family:TNF-like 41 c2kdoA_ not modelled 5.9 27 PDB header:rna binding protein Chain: A: PDB Molecule:ribosome maturation protein sbds; PDBTitle: structure of the human shwachman-bodian-diamond syndrome protein, sbds 42 d1f1sa3 not modelled 5.8 27 Fold:Hyaluronate lyase-like, C-terminal domain Superfamily:Hyaluronate lyase-like, C-terminal domain Family:Hyaluronate lyase-like, C-terminal domain 43 c2l16A_ not modelled 5.8 55 PDB header:protein transport Chain: A: PDB Molecule:sec-independent protein translocase protein tatad; PDBTitle: solution structure of bacillus subtilits tatad protein in dpc micelles 44 c2x12A_ not modelled 5.6 27 PDB header:cell adhesion Chain: A: PDB Molecule:fimbriae-associated protein fap1; PDBTitle: ph-induced modulation of streptococcus parasanguinis2 adhesion by fap1 fimbriae 45 d1w9pa2 not modelled 5.6 18 Fold:FKBP-like Superfamily:Chitinase insertion domain Family:Chitinase insertion domain 46 d1ei5a1 not modelled 5.6 38 Fold:Streptavidin-like Superfamily:D-aminopeptidase, middle and C-terminal domains Family:D-aminopeptidase, middle and C-terminal domains 47 d1s6la1 not modelled 5.6 33 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MerB N-terminal domain-like 48 c3vg8F_ not modelled 5.5 38 PDB header:unknown function Chain: F: PDB Molecule:hypothetical protein tthb210; PDBTitle: crystal structure of hypothetical protein tthb210 from thermus2 thermophilus hb8 49 d1zaka2 not modelled 5.4 33 Fold:Rubredoxin-like Superfamily:Microbial and mitochondrial ADK, insert "zinc finger" domain Family:Microbial and mitochondrial ADK, insert "zinc finger" domain 50 d1wiba_ not modelled 5.4 24 Fold:Ribosomal L11/L12e N-terminal domain Superfamily:Ribosomal L11/L12e N-terminal domain Family:Ribosomal L11/L12e N-terminal domain 51 c1gr3A_ not modelled 5.3 45 PDB header:collagen Chain: A: PDB Molecule:collagen x; PDBTitle: structure of the human collagen x nc1 trimer 52 d1gr3a_ not modelled 5.3 45 Fold:TNF-like Superfamily:TNF-like Family:TNF-like 53 c1o91B_ not modelled 5.3 27 PDB header:collagen Chain: B: PDB Molecule:collagen alpha 1(viii) chain; PDBTitle: crystal structure of a collagen viii nc1 domain trimer 54 d1o91a_ not modelled 5.3 27 Fold:TNF-like Superfamily:TNF-like Family:TNF-like 55 d1c3ha_ not modelled 5.2 31 Fold:TNF-like Superfamily:TNF-like Family:TNF-like 56 d2vl8a1 not modelled 5.2 74 Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Glycosylating toxin catalytic domain-like 57 d2pfxa1 not modelled 5.1 19 Fold:AhpD-like Superfamily:AhpD-like Family:Atu0492-like 58 c1jjoE_ not modelled 5.1 22 PDB header:signaling protein Chain: E: PDB Molecule:neuroserpin; PDBTitle: crystal structure of mouse neuroserpin (cleaved form) 59 c7apiB_ not modelled 5.0 6 PDB header:proteinase inhibitor Chain: B: PDB Molecule:alpha 1-antitrypsin; PDBTitle: the s variant of human alpha1-antitrypsin, structure and implications2 for function and metabolism 60 d2cr5a1 not modelled 5.0 27 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:UBX domain