Email l.a.kelley@imperial.ac.uk Description P42909 Date Thu Jan 5 12:02:06 GMT 2012 Unique Job ID f0593e756602eaa3

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3eyeA_ 100.0 100 PDB header:transferase Chain: A: PDB Molecule:pts system n-acetylgalactosamine-specific iib PDBTitle: crystal structure of pts system n-acetylgalactosamine-2 specific iib component 1 from escherichia coli 2 d1nrza_ 100.0 30 Fold:PTS IIb component Superfamily:PTS IIb component Family:PTS IIb component 3 d1blea_ 100.0 28 Fold:PTS IIb component Superfamily:PTS IIb component Family:PTS IIb component 4 c3lfjB_ 100.0 25 PDB header:transferase Chain: B: PDB Molecule:phosphotransferase system, mannose/fructose/n- PDBTitle: crystal structure of manxb from thermoanaerobacter tengcongensis 5 c3p3vB_ 100.0 34 PDB header:transferase Chain: B: PDB Molecule:pts system, n-acetylgalactosamine-specific iib component; PDBTitle: crystal structure of a pts dependent n-acetyl-galactosamine-iib2 component (agav, spy_0631) from streptococcus pyogenes at 1.65 a3 resolution 6 c1vsqC_ 100.0 34 PDB header:transferase Chain: C: PDB Molecule:mannose-specific phosphotransferase enzyme iib PDBTitle: solution nmr structure of the productive complex between2 iiamannose and iibmannose of the mannose transporter of3 the e. coli phosphotransferase system 7 c3l0gD_ 66.3 16 PDB header:transferase Chain: D: PDB Molecule:nicotinate-nucleotide pyrophosphorylase; PDBTitle: crystal structure of nicotinate-nucleotide pyrophosphorylase from2 ehrlichia chaffeensis at 2.05a resolution 8 c1qapA_ 64.2 8 PDB header:glycosyltransferase Chain: A: PDB Molecule:quinolinic acid phosphoribosyltransferase; PDBTitle: quinolinic acid phosphoribosyltransferase with bound2 quinolinic acid 9 d1r8ja2 44.8 12 Fold:Flavodoxin-like Superfamily:CheY-like Family:N-terminal domain of the circadian clock protein KaiA 10 c3rfaA_ 38.7 13 PDB header:oxidoreductase Chain: A: PDB Molecule:ribosomal rna large subunit methyltransferase n; PDBTitle: x-ray structure of rlmn from escherichia coli in complex with s-2 adenosylmethionine 11 d1qpoa1 34.4 11 Fold:TIM beta/alpha-barrel Superfamily:Nicotinate/Quinolinate PRTase C-terminal domain-like Family:NadC C-terminal domain-like 12 c3pm7A_ 32.2 3 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of ef_3132 protein from enterococcus faecalis at the2 resolution 2a, northeast structural genomics consortium target efr184 13 c3ilhA_ 29.4 9 PDB header:transcription regulator Chain: A: PDB Molecule:two component response regulator; PDBTitle: crystal structure of two component response regulator from cytophaga2 hutchinsonii 14 c1qpoA_ 28.4 11 PDB header:transferase Chain: A: PDB Molecule:quinolinate acid phosphoribosyl transferase; PDBTitle: quinolinate phosphoribosyl transferase (qaprtase) apo-enzyme from2 mycobacterium tuberculosis 15 c2k1oA_ 26.8 22 PDB header:gene regulation Chain: A: PDB Molecule:putative; PDBTitle: nmr structure of helicobacter pylori jhp0511 (hp0564). 16 d1k68a_ 25.7 9 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 17 d1qapa1 25.3 6 Fold:TIM beta/alpha-barrel Superfamily:Nicotinate/Quinolinate PRTase C-terminal domain-like Family:NadC C-terminal domain-like 18 c3gl9B_ 23.3 15 PDB header:signaling protein Chain: B: PDB Molecule:response regulator; PDBTitle: the structure of a histidine kinase-response regulator2 complex sheds light into two-component signaling and3 reveals a novel cis autophosphorylation mechanism 19 c3pajA_ 22.5 11 PDB header:transferase Chain: A: PDB Molecule:nicotinate-nucleotide pyrophosphorylase, carboxylating; PDBTitle: 2.00 angstrom resolution crystal structure of a quinolinate2 phosphoribosyltransferase from vibrio cholerae o1 biovar eltor str.3 n16961 20 c3obhA_ 20.9 4 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: x-ray crystal structure of protein sp_0782 (7-79) from streptococcus2 pneumoniae. northeast structural genomics consortium target spr104 21 c3khtA_ not modelled 19.6 10 PDB header:signaling protein Chain: A: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator from hahella chejuensis 22 d1t0kb_ not modelled 18.8 10 Fold:Bacillus chorismate mutase-like Superfamily:L30e-like Family:L30e/L7ae ribosomal proteins 23 c2yxxA_ not modelled 18.1 16 PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure analysis of diaminopimelate decarboxylate (lysa) 24 c3eqzB_ not modelled 17.7 20 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of a response regulator from colwellia2 psychrerythraea 25 d1mb3a_ not modelled 16.3 13 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 26 c2oqrA_ not modelled 15.8 20 PDB header:transcription,signaling protein Chain: A: PDB Molecule:sensory transduction protein regx3; PDBTitle: the structure of the response regulator regx3 from mycobacterium2 tuberculosis 27 d2pl1a1 not modelled 15.2 12 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 28 c3n53B_ not modelled 14.2 9 PDB header:transcription Chain: B: PDB Molecule:response regulator receiver modulated diguanylate cyclase; PDBTitle: crystal structure of a response regulator receiver modulated2 diguanylate cyclase from pelobacter carbinolicus 29 c2qv0A_ not modelled 14.1 11 PDB header:transcription Chain: A: PDB Molecule:protein mrke; PDBTitle: crystal structure of the response regulatory domain of2 protein mrke from klebsiella pneumoniae 30 c3h5iA_ not modelled 13.6 13 PDB header:transcription Chain: A: PDB Molecule:response regulator/sensory box protein/ggdef PDBTitle: crystal structure of the n-terminal domain of a response2 regulator/sensory box/ggdef 3-domain protein from3 carboxydothermus hydrogenoformans 31 d1ajza_ not modelled 13.6 19 Fold:TIM beta/alpha-barrel Superfamily:Dihydropteroate synthetase-like Family:Dihydropteroate synthetase 32 c2a5hC_ not modelled 13.3 15 PDB header:isomerase Chain: C: PDB Molecule:l-lysine 2,3-aminomutase; PDBTitle: 2.1 angstrom x-ray crystal structure of lysine-2,3-aminomutase from2 clostridium subterminale sb4, with michaelis analog (l-alpha-lysine3 external aldimine form of pyridoxal-5'-phosphate). 33 d1k66a_ not modelled 12.8 17 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 34 c1rnlA_ not modelled 12.8 15 PDB header:signal transduction protein Chain: A: PDB Molecule:nitrate/nitrite response regulator protein narl; PDBTitle: the nitrate/nitrite response regulator protein narl from narl 35 d1kgsa1 not modelled 12.4 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:PhoB-like 36 d2i7pa1 not modelled 11.8 19 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Fumble-like 37 c3cnbC_ not modelled 11.7 9 PDB header:dna binding protein Chain: C: PDB Molecule:dna-binding response regulator, merr family; PDBTitle: crystal structure of signal receiver domain of dna binding response2 regulator protein (merr) from colwellia psychrerythraea 34h 38 d1bs0a_ not modelled 11.5 13 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like 39 c2y5sA_ not modelled 11.3 16 PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase; PDBTitle: crystal structure of burkholderia cenocepacia dihydropteroate2 synthase complexed with 7,8-dihydropteroate. 40 d1t6t1_ not modelled 11.1 11 Fold:Toprim domain Superfamily:Toprim domain Family:Toprim domain 41 c3btnA_ not modelled 11.0 14 PDB header:biosynthetic protein Chain: A: PDB Molecule:antizyme inhibitor 1; PDBTitle: crystal structure of antizyme inhibitor, an ornithine2 decarboxylase homologous protein 42 c3m6mF_ not modelled 10.9 18 PDB header:lyase/transferase Chain: F: PDB Molecule:sensory/regulatory protein rpfc; PDBTitle: crystal structure of rpff complexed with rec domain of rpfc 43 d2f1fa1 not modelled 10.8 13 Fold:Ferredoxin-like Superfamily:ACT-like Family:IlvH-like 44 d1a04a2 not modelled 10.7 15 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 45 c3cz5B_ not modelled 10.1 12 PDB header:transcription regulator Chain: B: PDB Molecule:two-component response regulator, luxr family; PDBTitle: crystal structure of two-component response regulator, luxr family,2 from aurantimonas sp. si85-9a1 46 c3cg4A_ not modelled 10.0 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:response regulator receiver domain protein (chey-like); PDBTitle: crystal structure of response regulator receiver domain protein (chey-2 like) from methanospirillum hungatei jf-1 47 d1ad1a_ not modelled 9.9 24 Fold:TIM beta/alpha-barrel Superfamily:Dihydropteroate synthetase-like Family:Dihydropteroate synthetase 48 d1dbwa_ not modelled 9.8 6 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 49 d2fgca2 not modelled 9.8 19 Fold:Ferredoxin-like Superfamily:ACT-like Family:IlvH-like 50 c3hebB_ not modelled 9.7 16 PDB header:transcription regulator Chain: B: PDB Molecule:response regulator receiver domain protein (chey); PDBTitle: crystal structure of response regulator receiver domain from2 rhodospirillum rubrum 51 d1oqya2 not modelled 9.6 18 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 52 d1u0sy_ not modelled 9.5 13 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 53 c2rjnA_ not modelled 9.5 13 PDB header:hydrolase Chain: A: PDB Molecule:response regulator receiver:metal-dependent PDBTitle: crystal structure of an uncharacterized protein q2bku2 from2 neptuniibacter caesariensis 54 d1xxaa_ not modelled 9.3 33 Fold:DCoH-like Superfamily:C-terminal domain of arginine repressor Family:C-terminal domain of arginine repressor 55 d2obba1 not modelled 9.3 7 Fold:HAD-like Superfamily:HAD-like Family:BT0820-like 56 c3hv2B_ not modelled 9.3 6 PDB header:signaling protein Chain: B: PDB Molecule:response regulator/hd domain protein; PDBTitle: crystal structure of signal receiver domain of hd domain-2 containing protein from pseudomonas fluorescens pf-5 57 d2i7na2 not modelled 9.1 14 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Fumble-like 58 d2pc6a2 not modelled 8.8 8 Fold:Ferredoxin-like Superfamily:ACT-like Family:IlvH-like 59 c3c3wB_ not modelled 8.7 15 PDB header:transcription Chain: B: PDB Molecule:two component transcriptional regulatory protein devr; PDBTitle: crystal structure of the mycobacterium tuberculosis hypoxic response2 regulator dosr 60 c2yr1B_ not modelled 8.6 19 PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of 3-dehydroquinate dehydratase from geobacillus2 kaustophilus hta426 61 d2p5ma1 not modelled 8.5 29 Fold:DCoH-like Superfamily:C-terminal domain of arginine repressor Family:C-terminal domain of arginine repressor 62 c3cg0A_ not modelled 8.4 12 PDB header:lyase Chain: A: PDB Molecule:response regulator receiver modulated diguanylate cyclase PDBTitle: crystal structure of signal receiver domain of modulated diguanylate2 cyclase from desulfovibrio desulfuricans g20, an example of alternate3 folding 63 c3khdC_ not modelled 8.3 15 PDB header:transferase Chain: C: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of pff1300w. 64 c3kyiB_ not modelled 8.3 12 PDB header:transferase Chain: B: PDB Molecule:chey6 protein; PDBTitle: crystal structure of the phosphorylated p1 domain of chea3 in complex2 with chey6 from r. sphaeroides 65 c2y7eA_ not modelled 8.3 12 PDB header:lyase Chain: A: PDB Molecule:3-keto-5-aminohexanoate cleavage enzyme; PDBTitle: crystal structure of the 3-keto-5-aminohexanoate cleavage enzyme2 (kce) from candidatus cloacamonas acidaminovorans (tetragonal form) 66 c3hzhA_ not modelled 8.1 14 PDB header:signaling protein Chain: A: PDB Molecule:chemotaxis response regulator (chey-3); PDBTitle: crystal structure of the chex-chey-bef3-mg+2 complex from2 borrelia burgdorferi 67 c2qxyB_ not modelled 8.1 18 PDB header:transcription Chain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of a response regulator from thermotoga2 maritima 68 d1b4ba_ not modelled 8.0 29 Fold:DCoH-like Superfamily:C-terminal domain of arginine repressor Family:C-terminal domain of arginine repressor 69 c3c3mA_ not modelled 8.0 23 PDB header:signaling protein Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of the n-terminal domain of response regulator2 receiver protein from methanoculleus marisnigri jr1 70 c3icuA_ not modelled 8.0 16 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase rnf128; PDBTitle: protease-associated domain of the e3 ligase grail 71 c3cagF_ not modelled 7.8 29 PDB header:dna binding protein Chain: F: PDB Molecule:arginine repressor; PDBTitle: crystal structure of the oligomerization domain hexamer of the2 arginine repressor protein from mycobacterium tuberculosis in complex3 with 9 arginines. 72 d2guka1 not modelled 7.8 17 Fold:PG1857-like Superfamily:PG1857-like Family:PG1857-like 73 c1a2oB_ not modelled 7.8 15 PDB header:bacterial chemotaxis Chain: B: PDB Molecule:cheb methylesterase; PDBTitle: structural basis for methylesterase cheb regulation by a2 phosphorylation-activated domain 74 d1a2oa1 not modelled 7.8 14 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 75 d1o57a2 not modelled 7.7 6 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 76 c3eywA_ not modelled 7.6 19 PDB header:transport protein Chain: A: PDB Molecule:c-terminal domain of glutathione-regulated potassium-efflux PDBTitle: crystal structure of the c-terminal domain of e. coli kefc in complex2 with keff 77 d1i3ca_ not modelled 7.2 13 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 78 c1k3rA_ not modelled 7.2 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein mt0001; PDBTitle: crystal structure of the methyltransferase with a knot from2 methanobacterium thermoautotrophicum 79 c2zayA_ not modelled 7.2 23 PDB header:signaling protein Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator from desulfuromonas2 acetoxidans 80 c1dd9A_ not modelled 7.0 12 PDB header:transferase Chain: A: PDB Molecule:dna primase; PDBTitle: structure of the dnag catalytic core 81 d1dd9a_ not modelled 7.0 12 Fold:DNA primase core Superfamily:DNA primase core Family:DNA primase DnaG catalytic core 82 c3eulB_ not modelled 7.0 16 PDB header:transcription Chain: B: PDB Molecule:possible nitrate/nitrite response transcriptional PDBTitle: structure of the signal receiver domain of the putative2 response regulator narl from mycobacterium tuberculosis 83 d1dcfa_ not modelled 6.7 14 Fold:Flavodoxin-like Superfamily:CheY-like Family:Receiver domain of the ethylene receptor 84 c2q97T_ not modelled 6.5 20 PDB header:structural protein/cell invasion Chain: T: PDB Molecule:toxofilin; PDBTitle: complex of mammalian actin with toxofilin from toxoplasma gondii 85 c3f6cB_ not modelled 6.4 9 PDB header:dna binding protein Chain: B: PDB Molecule:positive transcription regulator evga; PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli 86 c1o57A_ not modelled 6.4 6 PDB header:dna binding protein Chain: A: PDB Molecule:pur operon repressor; PDBTitle: crystal structure of the purine operon repressor of2 bacillus subtilis 87 c3luaA_ not modelled 6.1 8 PDB header:transcription regulator Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of a signal receiver domain of two component signal2 transduction (histidine kinase) from clostridium thermocellum 88 c3jpyA_ not modelled 6.1 15 PDB header:transport protein Chain: A: PDB Molecule:glutamate [nmda] receptor subunit epsilon-2; PDBTitle: crystal structure of the zinc-bound amino terminal domain of the nmda2 receptor subunit nr2b 89 c2b7pA_ not modelled 6.1 20 PDB header:transferase Chain: A: PDB Molecule:probable nicotinate-nucleotide pyrophosphorylase; PDBTitle: crystal structure of quinolinic acid phosphoribosyltransferase from2 helicobacter pylori 90 c2jrlA_ not modelled 6.0 18 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: solution structure of the beryllofluoride-activated ntrc4 receiver2 domain dimer 91 c3lteH_ not modelled 6.0 13 PDB header:transcription Chain: H: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator (signal receiver domain) from2 bermanella marisrubri 92 d1mzva_ not modelled 6.0 23 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 93 c2is8A_ not modelled 6.0 12 PDB header:structural protein Chain: A: PDB Molecule:molybdopterin biosynthesis enzyme, moab; PDBTitle: crystal structure of the molybdopterin biosynthesis enzyme moab2 (ttha0341) from thermus theromophilus hb8 94 c3jteA_ not modelled 6.0 10 PDB header:protein binding Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator receiver domain2 protein from clostridium thermocellum 95 c1b4aA_ not modelled 5.9 29 PDB header:repressor Chain: A: PDB Molecule:arginine repressor; PDBTitle: structure of the arginine repressor from bacillus stearothermophilus 96 d1k3ra2 not modelled 5.8 11 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:Hypothetical protein MTH1 (MT0001), dimerisation domain 97 c2hwvA_ not modelled 5.8 11 PDB header:transcription Chain: A: PDB Molecule:dna-binding response regulator vicr; PDBTitle: crystal structure of an essential response regulator dna binding2 domain, vicrc in enterococcus faecalis, a member of the yycf3 subfamily. 98 c2k5jB_ not modelled 5.7 10 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein yiif; PDBTitle: solution structure of protein yiif from shigella flexneri2 serotype 5b (strain 8401) . northeast structural genomics3 consortium target sft1 99 d1dz3a_ not modelled 5.7 6 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related