Job Description P05194 Confidence 82.17% Date Thu Jan 5 10:58:42 GMT 2012 Rank 153 Aligned Residues 225 % Identity 13% Template c1vliA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse; PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution Resolution 2.38 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.					.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																									.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	T	V	K	D	L	V	I	G	T	G	A	P	K	I	I	V	S	L	M	A	K	.	.	.	.	D	I	A	S	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	R	V	D	H	Y	A	D	L	S	N	V	E	S	V	M
Query Conservation																									.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	F	Q	I	A	N	K	T	V	G	K	D	A	P	V	F	I	I	A	E	A	G	I	N	H	D	G	K	L	D	Q	A	F	A	L	I	D	A	A	A	E	A	G	A	D	A	V	K	F	Q	X	F	Q	A	D	R	X	Y	Q	K	D	P	D	V	S	I	F	S	L	V	Q	S	X	E	X	P	A	E	W	I
Template Known Secondary structure						T	T					T	T	S										T	T	T	T	T																T		S							B		G	G	G	G	T	S											G	G	G	B	S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	K	I	L	R	E	T	M	P	E	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	S	N
Query Conservation
Alig confidence												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.									.								.	.
Template Conservation												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.									.								.	.
Template Sequence		L	P	L	L	D	Y	C	R	E	K	.	Q	V	I	F	L	S	T	V	C	D	E	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	L	L	Q	S	T	S	.	P	S	A	F	K	I	A	.	.	S	Y	E	I	N	H	L	P	L	L	K	Y	V	A	R	L	N	R	P	X	I	F	S	T
Template Known Secondary structure											T	.	T						B			S				.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T		.		S						.	.	G	G	G	T	T										T	T		S
Template Predicted Secondary structure												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.									.								.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.															.	.	.	.	.	120	.	.		.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.											.	.																																		.
Query SS confidence																										.											.	.																																		.
Query Sequence		H	D	F	H	K	T	P	E	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D	A	.	D	I	P	K	I	A	L	M	P	Q	.	.	S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A	D	R	P	I	I	T	M	S	M	A	K	T	G	.	V	I	S	R	L	A	G	E	V
Query Conservation																										.											.	.																																		.
Alig confidence			.	.	.	.																				.											.	.									.											.														.
Template Conservation			.	.	.	.																																									.											.
Template Sequence		A	.	.	.	.	G	A	E	I	S	D	V	H	E	A	W	R	T	I	R	A	E	G	N	N	Q	I	A	I	X	H	C	V	A	K	Y	P	A	P	P	E	Y	S	N	L	.	S	V	I	P	X	L	A	A	A	F	.	P	E	A	V	I	G	F	S	D	H	S	E	H	P	T	E	A	P	C	A	A	V	R
Template Known Secondary structure		T	.	.	.	.	T															T	T	T											S	S	S	S			G	G	G			T	.	T									S	.	T	T	S									S	S	S	S
Template Predicted Secondary structure			.	.	.	.																																									.											.
Template SS confidence
		154					.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.													.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure													.										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	G	S	A	A	T	F	G	A	V	K	.	K	A	S	A	P	G	Q	I	S	.	.	.	.	.	.	.	.	.	.	.	.	V	N	D	L	R	T	V	L	T	I	L	H	Q
Query Conservation													.										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	A	K	L	I	E	K	H	F	T	I	D	K	N	L	P	G	A	D	H	S	F	A	L	N	P	D	E	L	K	E	X	V	D	G	I	R	K	T	E	A	E	L	K	Q
Template Known Secondary structure		T	T		S						B		S		T	T	S	S		S	S		T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions