153 c1vliA_ Probab=82.17   E-value=4.1  Score=20.96  Aligned_columns=225  Identities=13%

Q ss_pred             EEEECCEEECCCCCEEEEECCCC----CHHHHHHHHHHHHHCCCCEEE----------------EECHHHCCCCCHHHHH
Q ss_conf             58852278779985799980689----989999999987315998999----------------9813306899989999
Q batch____         3 TVTVKDLVIGTGAPKIIVSLMAK----DIASVKSEALAYREADFDILE----------------WRVDHYADLSNVESVM   62 (252)
Q Consensus         3 ~~~v~~~~~g~~~pkI~v~i~~~----~~~e~~~~~~~~~~~~~D~vE----------------lRlD~l~~~~~~~~l~   62 (252)
                      ..+|.+..||.+.|-.++.=.|.    +.+-.++-+..+...|||.|-                -+.+++....-..+..
T Consensus         2 ~~~I~~~~ig~~~~~~IIAEig~NH~Gdl~~A~~lI~~A~~aGadaVKFQt~~~~~~~~~~~~~~~~~~~~~~el~~e~~   81 (358)
T c1vliA_           2 AFQIANKTVGKDAPVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQXFQADRXYQKDPDVSIFSLVQSXEXPAEWI   81 (358)
T ss_dssp             EEEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCCCCCHHHHGGGBSSCGGGH
T ss_pred             CEEECCEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCHHHH
T ss_conf             76788898579996599976220357878999999999997199789842014210015655630457775316998999


Q ss_pred             HHHHHHHHHCCCCCEEEEECCHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             99999998528995899965667678536898999999999985499969998634863889999997564698899994
Q batch____        63 AAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALNRAAIDSGLVDMIDLELFTGDDQVKETVAYAHAHDVKVVMSN  142 (252)
Q Consensus        63 ~~~~~l~~~~~~~PiI~T~R~~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDiEl~~~~~~~~~l~~~~~~~~~~iI~S~  142 (252)
                      ..+...-+.. ++..+.|.-....              +..+.+.+ ++++-|-  ..+-..-.+++.+-+.|..+|+|-
T Consensus        82 ~~L~~~~~~~-Gi~f~sTpfd~~s--------------vd~l~~~~-v~~~KIa--S~el~n~pLL~~~A~~gkPvilST  143 (358)
T c1vliA_          82 LPLLDYCREK-QVIFLSTVCDEGS--------------ADLLQSTS-PSAFKIA--SYEINHLPLLKYVARLNRPXIFST  143 (358)
T ss_dssp             HHHHHHHHHT-TCEEECBCCSHHH--------------HHHHHTTC-CSCEEEC--GGGTTCHHHHHHHHTTCSCEEEEC
T ss_pred             HHHHHHHHHC-CCEEEEEECCHHH--------------HHHHHHCC-CCEEEEC--HHHCCCHHHHHHHHHCCCCEEEEC
T ss_conf             9999999975-9829983479999--------------99998639-9869984--122798899999963189718513


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCC-CEEEEEEECC--CHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC-HHHHHHHHH
Q ss_conf             258897588999999999997089-8899998008--989999999999999961389989998138876-699998855
Q batch____       143 HDFHKTPEAEEIIARLRKMQSFDA-DIPKIALMPQ--STSDVLTLLAATLEMQEQYADRPIITMSMAKTG-VISRLAGEV  218 (252)
Q Consensus       143 H~f~~TP~~~~l~~~~~~~~~~ga-DivKia~~~~--~~~D~l~ll~~~~~~~~~~~~~P~I~~~MG~~G-~~sRi~~~~  218 (252)
                      +    .-+.+|+...++.+.+.|. +++=+-+...  .+.+.++| .+...+++.+ ....|++|==..| ...-+++..
T Consensus       144 G----matl~Ei~~Av~~i~~~g~~~i~llhC~s~YP~p~~~~nL-~~i~~L~~~f-~~~~vG~SDHt~g~~~~~~aAva  217 (358)
T c1vliA_         144 A----GAEISDVHEAWRTIRAEGNNQIAIXHCVAKYPAPPEYSNL-SVIPXLAAAF-PEAVIGFSDHSEHPTEAPCAAVR  217 (358)
T ss_dssp             T----TCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCT-THHHHHHHHS-TTSEEEEEECCSSSSHHHHHHHH
T ss_pred             C----CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCH-HHHHHHHHHC-CCCEECCCCCCCCCCHHHHHHHH
T ss_conf             5----4688999999999996799848999558888988667374-6789999751-78602147766554035688863


Q ss_pred             HCCCEEEEECC-CCCCCCCCC------------HHHHHHHHHHHCC
Q ss_conf             18454862069-988999847------------8999999997403
Q batch____       219 FGSAATFGAVK-KASAPGQIS------------VNDLRTVLTILHQ  251 (252)
Q Consensus       219 ~GS~~tf~~~~-~~sAPGQ~~------------~~el~~~l~~l~~  251 (252)
                      +|..+.=-.+. ..+.||.=+            ++.+|.+...|++
T Consensus       218 lGA~vIEKHftldk~~~G~Dh~~Sl~P~el~~lv~~ir~~~~alG~  263 (358)
T c1vliA_         218 LGAKLIEKHFTIDKNLPGADHSFALNPDELKEXVDGIRKTEAELKQ  263 (358)
T ss_dssp             TTCSEEEEEBCSCTTSSCSSCTTSBCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCC
T ss_conf             0300002242146347899802333879999999999999997398