Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	A	F	K	I	W	Q	I	G	L	H	L	Q	Q	Q	E	A	V	A	V	A	I	V	R	G	A	K	E	C	F	L	Q	R	W	W	R	L	P	L	E	N	D	I	I	K	D	G	R	I	V	D	A	Q	Q	L	A	K	T	L	L
Secondary structure
SS confidence
Disorder		?	?	?	?	?																			?																											?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		P	W	S	R	E	L	P	Q	R	H	H	I	M	L	A	F	P	A	S	R	T	L	Q	R	S	F	P	R	P	S	M	S	L	G	E	R	E	Q	T	A	W	L	S	G	T	M	A	R	E	L	D	M	D	P	D	S	L	R	F	D
Secondary structure
SS confidence
Disorder						?	?		?	?	?								?										?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		Y	S	E	D	S	L	S	P	A	Y	N	V	T	A	A	Q	S	K	E	L	A	T	L	L	T	L	A	E	R	L	R	V	H	V	S	A	I	T	P	D	A	S	A	L	Q	R	F	L	P	F	L	P	S	H	Q	Q	C	L	A	W
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		R	D	N	E	Q	W	L	W	A	T	R	Y	S	W	G	R	K	L	A	V	G	M	T	S	A	K	E	L	A	A	A	L	S	V	D	P	E	S	V	A	I	C	G	E	G	G	F	D	P	W	E	A	V	S	V	R	Q	P	P	L
Secondary structure
SS confidence
Disorder																				?	?	?		?	?								?	?	?	?	?	?					?												?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Sequence		P	P	P	G	G	D	F	A	I	A	L	G	L	A	L	G	K	A	Y
Secondary structure
SS confidence
Disorder															?	?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 2ych chain A Region: 4 - 257 Aligned: 249 Modelled: 254 Confidence: 100.0% Identity: 20% PDB header:cell cycle Chain: A: PDB Molecule:competence protein pilm; PDBTitle: pilm-piln type iv pilus biogenesis complex Phyre2 PDB 1e4f chain T domain 1 Region: 5 - 168 Aligned: 162 Modelled: 164 Confidence: 99.7% Identity: 12% Fold: Ribonuclease H-like motif Superfamily: Actin-like ATPase domain Family: Actin/HSP70 Phyre2 PDB 2bh1 chain A domain 2 Region: 15 - 164 Aligned: 141 Modelled: 150 Confidence: 99.7% Identity: 14% Fold: Ribonuclease H-like motif Superfamily: Actin-like ATPase domain Family: Cyto-EpsL domain Phyre2 PDB 1e4g chain T Region: 4 - 201 Aligned: 196 Modelled: 198 Confidence: 99.6% Identity: 9% PDB header:bacterial cell division Chain: T: PDB Molecule:cell division protein ftsa; PDBTitle: ftsa (atp-bound form) from thermotoga maritima Phyre2 PDB 1yf5 chain L Region: 34 - 187 Aligned: 140 Modelled: 154 Confidence: 99.4% Identity: 16% PDB header:transport protein Chain: L: PDB Molecule:general secretion pathway protein l; PDBTitle: cyto-epsl: the cytoplasmic domain of epsl, an inner membrane component2 of the type ii secretion system of vibrio cholerae Phyre2 PDB 3h1q chain B Region: 2 - 201 Aligned: 136 Modelled: 145 Confidence: 99.1% Identity: 15% PDB header:structural protein Chain: B: PDB Molecule:ethanolamine utilization protein eutj; PDBTitle: crystal structure of ethanolamine utilization protein eutj from2 carboxydothermus hydrogenoformans Phyre2 PDB 2p3r chain A domain 1 Region: 4 - 80 Aligned: 74 Modelled: 77 Confidence: 96.9% Identity: 16% Fold: Ribonuclease H-like motif Superfamily: Actin-like ATPase domain Family: Glycerol kinase Phyre2 PDB 3ezw chain D Region: 4 - 80 Aligned: 74 Modelled: 77 Confidence: 96.8% Identity: 16% PDB header:transferase Chain: D: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of a hyperactive escherichia coli glycerol kinase2 mutant gly230 --> asp obtained using microfluidic crystallization3 devices Phyre2 PDB 3ifr chain B Region: 5 - 80 Aligned: 73 Modelled: 74 Confidence: 96.8% Identity: 14% PDB header:transferase Chain: B: PDB Molecule:carbohydrate kinase, fggy; PDBTitle: the crystal structure of xylulose kinase from rhodospirillum rubrum Phyre2 PDB 3g25 chain B Region: 2 - 80 Aligned: 76 Modelled: 79 Confidence: 96.8% Identity: 11% PDB header:transferase Chain: B: PDB Molecule:glycerol kinase; PDBTitle: 1.9 angstrom crystal structure of glycerol kinase (glpk) from2 staphylococcus aureus in complex with glycerol. Phyre2 PDB 3flc chain X Region: 4 - 79 Aligned: 73 Modelled: 76 Confidence: 96.6% Identity: 10% PDB header:transferase Chain: X: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of the his-tagged h232r mutant of glycerol kinase2 from enterococcus casseliflavus with glycerol Phyre2 PDB 2zf5 chain O Region: 4 - 79 Aligned: 73 Modelled: 76 Confidence: 96.5% Identity: 8% PDB header:transferase Chain: O: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of highly thermostable glycerol kinase from a2 hyperthermophilic archaeon Phyre2 PDB 3h6e chain B Region: 3 - 79 Aligned: 74 Modelled: 77 Confidence: 96.5% Identity: 12% PDB header:transferase Chain: B: PDB Molecule:carbohydrate kinase, fggy; PDBTitle: the crystal structure of a carbohydrate kinase from novosphingobium2 aromaticivorans Phyre2 PDB 2nlx chain A Region: 8 - 79 Aligned: 69 Modelled: 72 Confidence: 96.5% Identity: 12% PDB header:transferase Chain: A: PDB Molecule:xylulose kinase; PDBTitle: crystal structure of the apo e. coli xylulose kinase Phyre2 PDB 3i8b chain A Region: 4 - 79 Aligned: 69 Modelled: 76 Confidence: 96.4% Identity: 13% PDB header:transferase Chain: A: PDB Molecule:xylulose kinase; PDBTitle: the crystal structure of xylulose kinase from2 bifidobacterium adolescentis Phyre2 PDB 2d4w chain A Region: 5 - 80 Aligned: 73 Modelled: 76 Confidence: 96.4% Identity: 8% PDB header:transferase Chain: A: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of glycerol kinase from cellulomonas sp.2 nt3060 Phyre2 PDB 3gbt chain A Region: 5 - 79 Aligned: 72 Modelled: 75 Confidence: 96.4% Identity: 11% PDB header:transferase Chain: A: PDB Molecule:gluconate kinase; PDBTitle: crystal structure of gluconate kinase from lactobacillus acidophilus Phyre2 PDB 1glb chain G Region: 5 - 80 Aligned: 73 Modelled: 76 Confidence: 96.1% Identity: 14% PDB header:phosphotransferase Chain: G: PDB Molecule:glycerol kinase; PDBTitle: structure of the regulatory complex of escherichia coli iiiglc with2 glycerol kinase Phyre2 PDB 3gg4 chain B Region: 1 - 77 Aligned: 72 Modelled: 77 Confidence: 96.1% Identity: 10% PDB header:transferase Chain: B: PDB Molecule:glycerol kinase; PDBTitle: the crystal structure of glycerol kinase from yersinia2 pseudotuberculosis Phyre2 PDB 3hz6 chain A Region: 4 - 80 Aligned: 74 Modelled: 76 Confidence: 96.1% Identity: 15% PDB header:transferase Chain: A: PDB Molecule:xylulokinase; PDBTitle: crystal structure of xylulokinase from chromobacterium violaceum Phyre2 1 c2ychA_ 2 d1e4ft1 3 d2bh1a2 4 c1e4gT_ 5 c1yf5L_ 6 c3h1qB_ 7 d2p3ra1 8 c3ezwD_ 9 c3ifrB_ 10 c3g25B_ 11 c3flcX_ 12 c2zf5O_ 13 c3h6eB_ 14 c2nlxA_ 15 c3i8bA_ 16 c2d4wA_ 17 c3gbtA_ 18 c1glbG_ 19 c3gg4B_ 20 c3hz6A_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2ychA_ 100.0 20 PDB header:cell cycle Chain: A: PDB Molecule:competence protein pilm; PDBTitle: pilm-piln type iv pilus biogenesis complex 2 d1e4ft1 99.7 12 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Actin/HSP70 3 d2bh1a2 99.7 14 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Cyto-EpsL domain 4 c1e4gT_ 99.6 9 PDB header:bacterial cell division Chain: T: PDB Molecule:cell division protein ftsa; PDBTitle: ftsa (atp-bound form) from thermotoga maritima 5 c1yf5L_ 99.4 16 PDB header:transport protein Chain: L: PDB Molecule:general secretion pathway protein l; PDBTitle: cyto-epsl: the cytoplasmic domain of epsl, an inner membrane component2 of the type ii secretion system of vibrio cholerae 6 c3h1qB_ 99.1 15 PDB header:structural protein Chain: B: PDB Molecule:ethanolamine utilization protein eutj; PDBTitle: crystal structure of ethanolamine utilization protein eutj from2 carboxydothermus hydrogenoformans 7 d2p3ra1 96.9 16 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Glycerol kinase 8 c3ezwD_ 96.8 16 PDB header:transferase Chain: D: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of a hyperactive escherichia coli glycerol kinase2 mutant gly230 --> asp obtained using microfluidic crystallization3 devices 9 c3ifrB_ 96.8 14 PDB header:transferase Chain: B: PDB Molecule:carbohydrate kinase, fggy; PDBTitle: the crystal structure of xylulose kinase from rhodospirillum rubrum 10 c3g25B_ 96.8 11 PDB header:transferase Chain: B: PDB Molecule:glycerol kinase; PDBTitle: 1.9 angstrom crystal structure of glycerol kinase (glpk) from2 staphylococcus aureus in complex with glycerol. 11 c3flcX_ 96.6 10 PDB header:transferase Chain: X: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of the his-tagged h232r mutant of glycerol kinase2 from enterococcus casseliflavus with glycerol 12 c2zf5O_ 96.5 8 PDB header:transferase Chain: O: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of highly thermostable glycerol kinase from a2 hyperthermophilic archaeon 13 c3h6eB_ 96.5 12 PDB header:transferase Chain: B: PDB Molecule:carbohydrate kinase, fggy; PDBTitle: the crystal structure of a carbohydrate kinase from novosphingobium2 aromaticivorans 14 c2nlxA_ 96.5 12 PDB header:transferase Chain: A: PDB Molecule:xylulose kinase; PDBTitle: crystal structure of the apo e. coli xylulose kinase 15 c3i8bA_ 96.4 13 PDB header:transferase Chain: A: PDB Molecule:xylulose kinase; PDBTitle: the crystal structure of xylulose kinase from2 bifidobacterium adolescentis 16 c2d4wA_ 96.4 8 PDB header:transferase Chain: A: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of glycerol kinase from cellulomonas sp.2 nt3060 17 c3gbtA_ 96.4 11 PDB header:transferase Chain: A: PDB Molecule:gluconate kinase; PDBTitle: crystal structure of gluconate kinase from lactobacillus acidophilus 18 c1glbG_ 96.1 14 PDB header:phosphotransferase Chain: G: PDB Molecule:glycerol kinase; PDBTitle: structure of the regulatory complex of escherichia coli iiiglc with2 glycerol kinase 19 c3gg4B_ 96.1 10 PDB header:transferase Chain: B: PDB Molecule:glycerol kinase; PDBTitle: the crystal structure of glycerol kinase from yersinia2 pseudotuberculosis 20 c3hz6A_ 96.1 15 PDB header:transferase Chain: A: PDB Molecule:xylulokinase; PDBTitle: crystal structure of xylulokinase from chromobacterium violaceum 21 c2dpnB_ not modelled 95.8 14 PDB header:transferase Chain: B: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of the glycerol kinase from thermus2 thermophilus hb8 22 c2w40C_ not modelled 94.9 8 PDB header:transferase Chain: C: PDB Molecule:glycerol kinase, putative; PDBTitle: crystal structure of plasmodium falciparum glycerol kinase2 with bound glycerol 23 c2cgkB_ not modelled 94.7 8 PDB header:transferase Chain: B: PDB Molecule:l-rhamnulose kinase; PDBTitle: crystal structure of l-rhamnulose kinase from escherichia2 coli in an open uncomplexed conformation. 24 c3jvpA_ not modelled 94.6 13 PDB header:transferase Chain: A: PDB Molecule:ribulokinase; PDBTitle: crystal structure of ribulokinase from bacillus halodurans 25 c1xupO_ not modelled 94.5 10 PDB header:transferase Chain: O: PDB Molecule:glycerol kinase; PDBTitle: enterococcus casseliflavus glycerol kinase complexed with glycerol 26 d1u6za2 not modelled 93.8 9 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Ppx/GppA phosphatase 27 d1t6ca1 not modelled 93.6 5 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Ppx/GppA phosphatase 28 d2aa4a1 not modelled 93.5 13 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:ROK 29 d1r59o1 not modelled 93.0 11 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Glycerol kinase 30 d2ap1a2 not modelled 92.9 8 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:ROK 31 d1woqa1 not modelled 92.3 11 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:ROK 32 d1q18a1 not modelled 92.2 6 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Glucokinase 33 d1z6ra2 not modelled 92.1 12 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:ROK 34 c3htvA_ not modelled 91.9 13 PDB header:transferase Chain: A: PDB Molecule:d-allose kinase; PDBTitle: crystal structure of d-allose kinase (np_418508.1) from escherichia2 coli k12 at 1.95 a resolution 35 d2hoea3 not modelled 91.5 11 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:ROK 36 c3iucC_ not modelled 91.1 8 PDB header:chaperone Chain: C: PDB Molecule:heat shock 70kda protein 5 (glucose-regulated PDBTitle: crystal structure of the human 70kda heat shock protein 52 (bip/grp78) atpase domain in complex with adp 37 c2q2rA_ not modelled 90.9 8 PDB header:transferase Chain: A: PDB Molecule:glucokinase 1, putative; PDBTitle: trypanosoma cruzi glucokinase in complex with beta-d-glucose and adp 38 d1z05a3 not modelled 90.8 10 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:ROK 39 c2ap1A_ not modelled 89.7 9 PDB header:transferase Chain: A: PDB Molecule:putative regulator protein; PDBTitle: crystal structure of the putative regulatory protein 40 d2ewsa1 not modelled 89.2 10 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Fumble-like 41 d1zc6a1 not modelled 88.0 13 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:BadF/BadG/BcrA/BcrD-like 42 c3r8eA_ not modelled 87.4 9 PDB header:transferase Chain: A: PDB Molecule:hypothetical sugar kinase; PDBTitle: crystal structure of a hypothetical sugar kinase (chu_1875) from2 cytophaga hutchinsonii atcc 33406 at 1.65 a resolution 43 c1z6rC_ not modelled 85.3 11 PDB header:transcription Chain: C: PDB Molecule:mlc protein; PDBTitle: crystal structure of mlc from escherichia coli 44 c1zc6A_ not modelled 84.4 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:probable n-acetylglucosamine kinase; PDBTitle: crystal structure of putative n-acetylglucosamine kinase from2 chromobacterium violaceum. northeast structural genomics target3 cvr23. 45 c1z05A_ not modelled 83.3 10 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, rok family; PDBTitle: crystal structure of the rok family transcriptional regulator, homolog2 of e.coli mlc protein. 46 d1huxa_ not modelled 80.8 7 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:BadF/BadG/BcrA/BcrD-like 47 c3hi0B_ not modelled 79.5 9 PDB header:hydrolase Chain: B: PDB Molecule:putative exopolyphosphatase; PDBTitle: crystal structure of putative exopolyphosphatase (17739545) from2 agrobacterium tumefaciens str. c58 (dupont) at 2.30 a resolution 48 c1woqB_ not modelled 79.4 11 PDB header:transferase Chain: B: PDB Molecule:inorganic polyphosphate/atp-glucomannokinase; PDBTitle: crystal structure of inorganic polyphosphate/atp-glucomannokinase from2 arthrobacter sp. strain km at 1.8 a resolution 49 c1t6dB_ not modelled 79.0 3 PDB header:hydrolase Chain: B: PDB Molecule:exopolyphosphatase; PDBTitle: miras phasing of the aquifex aeolicus ppx/gppa phosphatase: crystal2 structure of the type ii variant 50 c2e2pA_ not modelled 78.3 9 PDB header:transferase Chain: A: PDB Molecule:hexokinase; PDBTitle: crystal structure of sulfolobus tokodaii hexokinase in2 complex with adp 51 c3mdqA_ not modelled 77.8 11 PDB header:hydrolase Chain: A: PDB Molecule:exopolyphosphatase; PDBTitle: crystal structure of an exopolyphosphatase (chu_0316) from cytophaga2 hutchinsonii atcc 33406 at 1.50 a resolution 52 c2qm1D_ not modelled 77.0 9 PDB header:transferase Chain: D: PDB Molecule:glucokinase; PDBTitle: crystal structure of glucokinase from enterococcus faecalis 53 c2floA_ not modelled 76.4 9 PDB header:hydrolase Chain: A: PDB Molecule:exopolyphosphatase; PDBTitle: crystal structure of exopolyphosphatase (ppx) from e. coli o157:h7 54 c2aa4B_ not modelled 74.6 14 PDB header:transferase Chain: B: PDB Molecule:putative n-acetylmannosamine kinase; PDBTitle: crystal structure of escherichia coli putative n-2 acetylmannosamine kinase, new york structural genomics3 consortium 55 d2gupa1 not modelled 72.7 10 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:ROK 56 d1sz2a1 not modelled 71.6 5 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Glucokinase 57 d1jcea1 not modelled 71.2 19 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Actin/HSP70 58 c2hoeA_ not modelled 68.9 11 PDB header:transferase Chain: A: PDB Molecule:n-acetylglucosamine kinase; PDBTitle: crystal structure of n-acetylglucosamine kinase (tm1224) from2 thermotoga maritima at 2.46 a resolution 59 c2ch5D_ not modelled 68.7 11 PDB header:transferase Chain: D: PDB Molecule:nagk protein; PDBTitle: crystal structure of human n-acetylglucosamine kinase in2 complex with n-acetylglucosamine 60 c3cerD_ not modelled 68.6 11 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:possible exopolyphosphatase-like protein; PDBTitle: crystal structure of the exopolyphosphatase-like protein2 q8g5j2. northeast structural genomics consortium target3 blr13 61 c1jcgA_ not modelled 67.7 18 PDB header:structural protein Chain: A: PDB Molecule:rod shape-determining protein mreb; PDBTitle: mreb from thermotoga maritima, amppnp 62 c2khoA_ not modelled 66.0 19 PDB header:chaperone Chain: A: PDB Molecule:heat shock protein 70; PDBTitle: nmr-rdc / xray structure of e. coli hsp70 (dnak) chaperone2 (1-605) complexed with adp and substrate 63 d1hjra_ not modelled 60.6 5 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:RuvC resolvase 64 c2gupA_ not modelled 60.5 10 PDB header:transferase Chain: A: PDB Molecule:rok family protein; PDBTitle: structural genomics, the crystal structure of a rok family protein2 from streptococcus pneumoniae tigr4 in complex with sucrose 65 c3mcpA_ not modelled 58.4 25 PDB header:transferase Chain: A: PDB Molecule:glucokinase; PDBTitle: crystal structure of glucokinase (bdi_1628) from parabacteroides2 distasonis atcc 8503 at 3.00 a resolution 66 c3eo3B_ not modelled 57.5 6 PDB header:isomerase, transferase Chain: B: PDB Molecule:bifunctional udp-n-acetylglucosamine 2-epimerase/n- PDBTitle: crystal structure of the n-acetylmannosamine kinase domain of human2 gne protein 67 d1bdga1 not modelled 56.7 10 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase 68 c1mwmA_ not modelled 56.6 0 PDB header:structural protein Chain: A: PDB Molecule:parm; PDBTitle: parm from plasmid r1 adp form 69 d1cdwa2 not modelled 54.1 19 Fold:TBP-like Superfamily:TATA-box binding protein-like Family:TATA-box binding protein (TBP), C-terminal domain 70 d1qnaa2 not modelled 53.7 18 Fold:TBP-like Superfamily:TATA-box binding protein-like Family:TATA-box binding protein (TBP), C-terminal domain 71 c3vgkB_ not modelled 49.7 8 PDB header:transferase Chain: B: PDB Molecule:glucokinase; PDBTitle: crystal structure of a rok family glucokinase from streptomyces2 griseus 72 d1nbwa2 not modelled 49.2 5 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:ATPase domain of dehydratase reactivase alpha subunit 73 d2d0oa2 not modelled 48.6 9 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:ATPase domain of dehydratase reactivase alpha subunit 74 c1nbwA_ not modelled 48.0 5 PDB header:hydrolase Chain: A: PDB Molecule:glycerol dehydratase reactivase alpha subunit; PDBTitle: glycerol dehydratase reactivase 75 c1xc3A_ not modelled 47.3 9 PDB header:transferase Chain: A: PDB Molecule:putative fructokinase; PDBTitle: structure of a putative fructokinase from bacillus subtilis 76 c2v7zA_ not modelled 45.8 17 PDB header:chaperone Chain: A: PDB Molecule:heat shock cognate 71 kda protein; PDBTitle: crystal structure of the 70-kda heat shock cognate protein2 from rattus norvegicus in post-atp hydrolysis state 77 d2ch5a2 not modelled 45.7 9 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:BadF/BadG/BcrA/BcrD-like 78 c1hpmA_ not modelled 43.5 16 PDB header:hydrolase (acting on acid anhydrides) Chain: A: PDB Molecule:44k atpase fragment (n-terminal) of 7o kd heat- PDBTitle: how potassium affects the activity of the molecular2 chaperone hsc70. ii. potassium binds specifically in the3 atpase active site 79 c1bdgA_ not modelled 41.2 10 PDB header:hexokinase Chain: A: PDB Molecule:hexokinase; PDBTitle: hexokinase from schistosoma mansoni complexed with glucose 80 d1czan3 not modelled 40.2 14 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase 81 d1mp9a1 not modelled 37.0 16 Fold:TBP-like Superfamily:TATA-box binding protein-like Family:TATA-box binding protein (TBP), C-terminal domain 82 d2fsja2 not modelled 36.5 14 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Ta0583-like 83 d1nh2a2 not modelled 33.6 18 Fold:TBP-like Superfamily:TATA-box binding protein-like Family:TATA-box binding protein (TBP), C-terminal domain 84 d1bg3a3 not modelled 32.7 7 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase 85 d1xc3a1 not modelled 32.4 13 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:ROK 86 d2f9wa2 not modelled 29.8 18 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:CoaX-like 87 c2fsnB_ not modelled 28.2 15 PDB header:structural protein Chain: B: PDB Molecule:hypothetical protein ta0583; PDBTitle: crystal structure of ta0583, an archaeal actin homolog, complex with2 adp 88 c3d2fC_ not modelled 27.7 9 PDB header:chaperone Chain: C: PDB Molecule:heat shock protein homolog sse1; PDBTitle: crystal structure of a complex of sse1p and hsp70 89 d1cdwa1 not modelled 26.6 21 Fold:TBP-like Superfamily:TATA-box binding protein-like Family:TATA-box binding protein (TBP), C-terminal domain 90 d1aisa2 not modelled 26.0 19 Fold:TBP-like Superfamily:TATA-box binding protein-like Family:TATA-box binding protein (TBP), C-terminal domain 91 d1mp9a2 not modelled 24.7 21 Fold:TBP-like Superfamily:TATA-box binding protein-like Family:TATA-box binding protein (TBP), C-terminal domain 92 d1czan1 not modelled 23.9 12 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase 93 d2e8aa1 not modelled 23.7 21 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Actin/HSP70 94 d1dkgd1 not modelled 23.6 16 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Actin/HSP70 95 d1aisa1 not modelled 23.1 12 Fold:TBP-like Superfamily:TATA-box binding protein-like Family:TATA-box binding protein (TBP), C-terminal domain 96 c2d0oA_ not modelled 23.0 10 PDB header:chaperone Chain: A: PDB Molecule:diol dehydratase-reactivating factor large PDBTitle: strcuture of diol dehydratase-reactivating factor complexed2 with adp and mg2+ 97 d1nh2a1 not modelled 22.1 19 Fold:TBP-like Superfamily:TATA-box binding protein-like Family:TATA-box binding protein (TBP), C-terminal domain 98 d2zgya1 not modelled 21.7 0 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Actin/HSP70 99 c3lm2B_ not modelled 21.7 7 PDB header:transferase Chain: B: PDB Molecule:putative kinase; PDBTitle: crystal structure of putative kinase. (17743352) from agrobacterium2 tumefaciens str. c58 (dupont) at 1.70 a resolution

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0