Job Description P0AG76 Confidence 99.63% Date Thu Jan 5 11:28:20 GMT 2012 Rank 24 Aligned Residues 246 % Identity 16% Template c1oidA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein usha; PDBTitle: 5'-nucleotidase (e. coli) with an engineered disulfide2 bridge (s228c, p513c) Resolution 2.1 Å

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		1	.	.	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure												.	.																																				.
Query SS confidence												.	.																																				.
Query Sequence		M	R	I	L	H	T	S	D	W	H	.	.	L	G	Q	N	F	Y	S	K	S	R	E	A	E	H	Q	A	F	L	D	W	L	L	E	T	A	Q	T	H	Q	V	D	A	I	I	V	.	A	G	D	V	F	D	T	G	S	P	P	S	Y	A	R	T	L	Y	N	R	F	V	V	N	L	Q	Q	T	G	C	H	L
Query Conservation												.	.																																				.
Alig confidence												.	.																																				.									.	.
Template Conservation																																																										.	.
Template Sequence		I	T	V	L	H	T	N	D	H	H	G	H	F	W	R	N	E	Y	G	E	Y	G	L	A	A	Q	K	T	L	V	D	G	I	R	K	E	V	A	A	E	G	G	S	V	L	L	L	S	G	G	D	I	N	T	G	V	.	.	P	E	S	D	L	Q	D	A	E	P	D	F	R	G	M	N	L	V	G	Y	D	A
Template Known Secondary structure											T	T			S			T	T	S																					T	T									S			S	S	S		.	.					T	T	T	T											T
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.											.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	L	A	G	N	H	D	S	V	A	T	L	N	E	S	R	D	I	M	A	F	L	N	T	T	V	V	A	.	.	.	.	.	.	.	.	.	.	S	A	G	H	A	P	Q	I	L	P	R	R	D	G	T	P	G	A	V	L	C	P	I	P	F	L	R	P	R	D	I	I	T	S	Q	A	G	L	N	G	I
Query Conservation																															.	.	.	.	.	.	.	.	.	.
Alig confidence			.																												.	.	.	.	.	.	.	.	.	.
Template Conservation			.
Template Sequence		M	.	A	I	G	N	H	E	F	D	N	P	L	T	V	L	R	Q	Q	E	K	W	A	K	F	P	L	L	S	A	N	I	Y	Q	K	S	T	G	E	R	L	F	K	P	W	A	L	F	K	R	Q	D	L	K	I	A	V	I	G	L	T	T	D	D	T	A	K	I	G	N	P	E	Y	F	T	D	I	E	F	R
Template Known Secondary structure			.				G	G	G	G	S	S													S	S					S	S				T	T	T			B	S	S									T	T											T	T					S		G	G	G	G	T	T
Template Predicted Secondary structure			.
Template SS confidence
		112		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	Q	Q	H	L	L	A	A	I	T	D	Y	Y	Q	Q	H	Y	A	D	A	C	K	L	R	G	D	Q	P	L	P	I	I	A	T	G	H	L	T	T	V	G	A	S	K	S	D	A	V	R	D	I	Y	I	G	T	L	D	A	F	P	A	Q	N	F	P	P	A	D	Y	I	A	L	G	H	I	H	R	A	Q
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.																																							.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.																																							.	.	.
Template Sequence		K	P	A	D	E	A	K	L	V	I	Q	E	L	Q	Q	.	.	.	.	.	.	.	.	.	.	T	E	K	P	D	I	I	I	A	A	T	H	M	G	H	Y	D	N	G	E	H	G	C	N	A	P	G	D	V	E	M	A	R	A	L	P	A	G	.	.	.	S	L	A	M	I	V	G	G	H	S	Q	D	P	V
Template Known Secondary structure																	.	.	.	.	.	.	.	.	.	.	T	T			S								S				G	G	G			T	T	S											S		T	T	.	.	.	S	S	S						S	S			B
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.																																							.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.											.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.				.	.	.	.	.	.	250	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	G	G	M	E	H	V	R	Y	C	G	S	P	I	P	L	S	F	D	E	C	G	K	S	K	Y	V	H	L	V	T	F	S	N	G	K
Query Conservation
Alig confidence							.	.
Template Conservation							.	.
Template Sequence		C	M	A	A	E	.	.	N	K	K	Q	V	D	Y	V	P	G	T	P	C	K	P	D	Q	Q	N	G	I	W	I	V	Q	A	H	E	W	G
Template Known Secondary structure						T	.	.	T				S	S			T	T	S								T	T						B		S	T	T
Template Predicted Secondary structure							.	.
Template SS confidence
		258	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions